Experiment set39S405 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO8 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS36525 -4.0 -1.3 hypothetical protein compare
BPHYT_RS30040 -3.8 -1.3 hypothetical protein compare
BPHYT_RS09280 -3.4 -1.1 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS28600 -3.2 -1.5 ArsC family transcriptional regulator compare
BPHYT_RS29920 -3.1 -1.0 hypothetical protein compare
BPHYT_RS11960 -3.1 -1.0 MarR family transcriptional regulator compare
BPHYT_RS31840 -3.0 -1.9 anhydrase compare
BPHYT_RS09895 -3.0 -1.4 LysR family transcriptional regulator compare
BPHYT_RS11685 -3.0 -1.0 phasin family protein compare
BPHYT_RS28300 -2.9 -1.0 histone nucleoid-structuring protein H-NS compare
BPHYT_RS04330 -2.9 -8.7 hypothetical protein compare
BPHYT_RS35530 -2.8 -2.0 arsenate reductase compare
BPHYT_RS30340 -2.8 -1.2 AraC family transcriptional regulator compare
BPHYT_RS25070 -2.7 -1.6 choline ABC transporter permease compare
BPHYT_RS12510 -2.6 -1.5 RNA-binding protein compare
BPHYT_RS22300 -2.6 -1.6 hypothetical protein compare
BPHYT_RS14920 -2.6 -2.4 hypothetical protein compare
BPHYT_RS32400 -2.5 -3.5 TetR family transcriptional regulator compare
BPHYT_RS11765 -2.5 -0.8 polyamine ABC transporter permease compare
BPHYT_RS06335 -2.5 -1.2 CopG family transcriptional regulator compare
BPHYT_RS14550 -2.4 -0.8 tRNA-Asn compare
BPHYT_RS03410 -2.4 -1.9 queuine tRNA-ribosyltransferase compare
BPHYT_RS13470 -2.3 -0.8 arylsulfate sulfotransferase compare
BPHYT_RS14670 -2.3 -1.1 hypothetical protein compare
BPHYT_RS01625 -2.3 -1.5 chemotaxis protein CheY compare
BPHYT_RS34745 -2.3 -1.0 hypothetical protein compare
BPHYT_RS04370 -2.2 -0.7 glycosyl transferase compare
BPHYT_RS28485 -2.2 -0.7 GntR family transcriptional regulator compare
BPHYT_RS30505 -2.2 -1.5 ABC transporter permease compare
BPHYT_RS15190 -2.2 -1.5 acyl carrier protein compare
BPHYT_RS04350 -2.2 -7.6 membrane protein compare
BPHYT_RS07400 -2.2 -1.8 hypothetical protein compare
BPHYT_RS04095 -2.1 -1.0 SAM-dependent methyltransferase PhcB compare
BPHYT_RS33765 -2.1 -0.7 membrane protein compare
BPHYT_RS19905 -2.1 -1.5 membrane protein compare
BPHYT_RS26820 -2.1 -1.4 LysR family transcriptional regulator compare
BPHYT_RS01485 -2.1 -1.2 histidine kinase compare
BPHYT_RS18660 -2.1 -1.6 hypothetical protein compare
BPHYT_RS34655 -2.0 -1.3 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS05485 -2.0 -3.2 nitrogen regulatory protein P-II 1 compare
BPHYT_RS20060 -2.0 -1.1 hypothetical protein compare
BPHYT_RS29720 -2.0 -1.3 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS22810 -2.0 -1.5 biopolymer transporter ExbB compare
BPHYT_RS34810 -2.0 -2.4 RND transporter compare
BPHYT_RS30130 -2.0 -2.4 AraC family transcriptional regulator compare
BPHYT_RS02365 -2.0 -1.3 hypothetical protein compare
BPHYT_RS26385 -1.9 -1.1 glutamine amidotransferase compare
BPHYT_RS22815 -1.9 -1.7 TonB-denpendent receptor compare
BPHYT_RS23275 -1.9 -1.9 3-methylcrotonyl-CoA carboxylase subunit alpha compare
BPHYT_RS14060 -1.9 -1.0 peptidase M23 compare
BPHYT_RS36275 -1.8 -1.0 hypothetical protein compare
BPHYT_RS09315 -1.8 -0.6 chemotaxis protein CheY compare
BPHYT_RS09465 -1.8 -1.0 transcriptional regulator compare
BPHYT_RS29870 -1.8 -1.0 2-dehydropantoate 2-reductase compare
BPHYT_RS23225 -1.8 -1.6 hypothetical protein compare
BPHYT_RS28410 -1.8 -1.8 ubiquinol oxidase subunit II, cyanide insensitive compare
BPHYT_RS28370 -1.8 -1.2 peroxidase compare
BPHYT_RS31545 -1.8 -2.2 membrane protein compare
BPHYT_RS16180 -1.8 -0.6 TetR family transcriptional regulator compare
BPHYT_RS18610 -1.7 -3.5 lytic transglycosylase compare
BPHYT_RS26740 -1.7 -1.3 hypothetical protein compare
BPHYT_RS29380 -1.7 -1.8 hypothetical protein compare
BPHYT_RS30140 -1.7 -0.8 3-methylitaconate isomerase compare
BPHYT_RS16555 -1.7 -1.7 cation transporter compare
BPHYT_RS00980 -1.7 -0.9 GCN5 family acetyltransferase compare
BPHYT_RS03655 -1.7 -1.1 membrane protein compare
BPHYT_RS25875 -1.7 -0.8 type III secretion protein compare
BPHYT_RS04335 -1.7 -0.9 membrane protein compare
BPHYT_RS04340 -1.7 -1.1 hypothetical protein compare
BPHYT_RS11680 -1.6 -1.2 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS09585 -1.6 -1.1 hypothetical protein compare
BPHYT_RS11155 -1.6 -0.9 hypothetical protein compare
BPHYT_RS17240 -1.6 -0.5 cell division protein FtsW compare
BPHYT_RS09905 -1.6 -0.7 hypothetical protein compare
BPHYT_RS25080 -1.6 -0.8 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS03170 -1.6 -0.9 membrane protein compare
BPHYT_RS12295 -1.6 -1.5 LysR family transcriptional regulator compare
BPHYT_RS04365 -1.6 -7.1 membrane protein compare
BPHYT_RS28885 -1.6 -1.1 betaine-aldehyde dehydrogenase compare
BPHYT_RS07325 -1.5 -0.5 GntR family transcriptional regulator compare
BPHYT_RS20245 -1.5 -2.2 iron ABC transporter substrate-binding protein compare
BPHYT_RS26925 -1.5 -1.2 NIPSNAP family containing protein compare
BPHYT_RS17920 -1.5 -1.0 protein CyaY compare
BPHYT_RS28170 -1.5 -1.7 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS27155 -1.5 -1.0 peroxiredoxin compare
BPHYT_RS16065 -1.5 -0.7 LacI family transcriptional regulator compare
BPHYT_RS10710 -1.5 -1.2 sensor histidine kinase compare
BPHYT_RS23475 -1.5 -1.0 luciferase compare
BPHYT_RS32260 -1.5 -0.6 hypothetical protein compare
BPHYT_RS02575 -1.5 -6.6 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS00160 -1.5 -2.5 ABC transporter substrate-binding protein compare
BPHYT_RS32340 -1.5 -2.0 LrgA family protein compare
BPHYT_RS28000 -1.5 -1.0 permease compare
BPHYT_RS29745 -1.5 -1.8 phosphonopyruvate decarboxylase compare
BPHYT_RS21940 -1.5 -1.6 hemolysin D compare
BPHYT_RS10305 -1.4 -0.9 hypothetical protein compare
BPHYT_RS12925 -1.4 -0.7 exodeoxyribonuclease III compare
BPHYT_RS30775 -1.4 -1.1 gluconate 2-dehydrogenase compare
BPHYT_RS20475 -1.4 -1.5 hypothetical protein compare
BPHYT_RS12550 -1.4 -0.7 GTP-binding protein HflX compare
BPHYT_RS07770 -1.4 -1.4 hypothetical protein compare
BPHYT_RS11265 -1.4 -1.0 hypothetical protein compare
BPHYT_RS32750 -1.4 -0.8 lipoprotein compare
BPHYT_RS28705 -1.4 -0.9 IclR family transcriptional regulator compare
BPHYT_RS19660 -1.4 -1.1 hypothetical protein compare
BPHYT_RS02860 -1.4 -0.4 membrane protein compare
BPHYT_RS36040 -1.4 -2.0 hypothetical protein compare
BPHYT_RS10590 -1.4 -1.6 hypothetical protein compare
BPHYT_RS26380 -1.4 -1.0 cobalamin biosynthesis protein CobT compare
BPHYT_RS20545 -1.4 -1.6 hypothetical protein compare
BPHYT_RS02570 -1.4 -5.6 phosphocarrier protein HPr compare
BPHYT_RS34025 -1.4 -1.3 hypothetical protein compare
BPHYT_RS28870 -1.4 -1.1 MarR family transcriptional regulator compare
BPHYT_RS25250 -1.4 -1.8 porin compare
BPHYT_RS10005 -1.3 -1.0 hypothetical protein compare
BPHYT_RS35835 -1.3 -1.5 hypothetical protein compare
BPHYT_RS27370 -1.3 -1.0 CoA transferase compare
BPHYT_RS21530 -1.3 -1.3 RNA polymerase subunit sigma-24 compare
BPHYT_RS24105 -1.3 -1.8 chloroperoxidase compare
BPHYT_RS03730 -1.3 -1.3 transcriptional repressor NrdR compare
BPHYT_RS30145 -1.3 -2.5 aconitate hydratase compare
BPHYT_RS31110 -1.3 -1.3 hypothetical protein compare
BPHYT_RS10065 -1.3 -0.7 cytochrome C oxidase subunit I compare
BPHYT_RS32360 -1.3 -0.8 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS31600 -1.3 -1.9 hypothetical protein compare
BPHYT_RS12060 -1.3 -0.8 hypothetical protein compare
BPHYT_RS07085 -1.3 -1.1 LysR family transcriptional regulator compare
BPHYT_RS27920 -1.3 -0.6 tricarballylate utilization protein B compare
BPHYT_RS33580 -1.3 -2.2 geranyltranstransferase compare
BPHYT_RS11385 -1.3 -2.7 lipid A biosynthesis lauroyl acyltransferase compare
BPHYT_RS29810 -1.3 -0.8 hexapeptide transferase compare
BPHYT_RS01965 -1.3 -1.1 tRNA-Ala compare
BPHYT_RS05455 -1.3 -1.8 AraC family transcriptional regulator compare
BPHYT_RS22840 -1.3 -1.6 motility protein B compare
BPHYT_RS04965 -1.3 -2.9 ATP-binding protein compare
BPHYT_RS11805 -1.3 -0.9 hypothetical protein compare
BPHYT_RS27800 -1.3 -2.3 esterase compare
BPHYT_RS09565 -1.2 -0.9 acetyl-CoA acetyltransferase compare
BPHYT_RS09860 -1.2 -0.6 pilus assembly protein PilP compare
BPHYT_RS10185 -1.2 -1.5 MarR family transcriptional regulator compare
BPHYT_RS22500 -1.2 -1.6 transcriptional regulator compare
BPHYT_RS13130 -1.2 -0.9 metallophosphatase compare
BPHYT_RS21070 -1.2 -1.6 ferredoxin compare
BPHYT_RS09155 -1.2 -1.9 3-ketoacyl-ACP reductase compare
BPHYT_RS29865 -1.2 -0.9 sugar transferase compare
BPHYT_RS21975 -1.2 -1.8 2-dehydropantoate 2-reductase compare
BPHYT_RS32675 -1.2 -1.3 2-methylcitrate dehydratase compare
BPHYT_RS33965 -1.2 -1.7 methylcitrate synthase compare
BPHYT_RS30485 -1.2 -0.9 ABC transporter ATP-binding protein compare
BPHYT_RS20440 -1.2 -0.8 IclR family transcriptional regulator compare
BPHYT_RS18590 -1.2 -0.5 hypothetical protein compare
BPHYT_RS27250 -1.2 -1.2 NAD-dependent epimerase/dehydratase compare
BPHYT_RS11825 -1.2 -0.7 cytosine deaminase compare
BPHYT_RS33280 -1.2 -1.2 membrane protein compare
BPHYT_RS18710 -1.2 -1.6 membrane protein compare
BPHYT_RS07320 -1.2 -0.7 dihydrodipicolinate synthetase compare
BPHYT_RS18910 -1.2 -0.9 FlgN compare
BPHYT_RS14840 -1.2 -3.6 lytic transglycosylase compare
BPHYT_RS09960 -1.2 -3.1 short-chain dehydrogenase compare
BPHYT_RS28305 -1.2 -0.8 protein tyrosine phosphatase compare
BPHYT_RS26525 -1.2 -0.6 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS31040 -1.2 -1.1 sugar transporter compare
BPHYT_RS04910 -1.2 -0.8 phenylacetic acid degradation protein compare
BPHYT_RS35885 -1.2 -1.5 hypothetical protein compare
BPHYT_RS30885 -1.1 -1.8 hypothetical protein compare
BPHYT_RS05650 -1.1 -0.9 hypothetical protein compare
BPHYT_RS30415 -1.1 -1.3 AraC family transcriptional regulator compare
BPHYT_RS02180 -1.1 -1.2 hypothetical protein compare
BPHYT_RS27060 -1.1 -1.0 photosystem reaction center subunit H compare
BPHYT_RS09970 -1.1 -1.7 glutathione S-transferase compare
BPHYT_RS29035 -1.1 -1.1 arsenic transporter compare
BPHYT_RS00705 -1.1 -1.3 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS17040 -1.1 -2.0 membrane protein compare
BPHYT_RS08600 -1.1 -1.0 hypothetical protein compare
BPHYT_RS03375 -1.1 -0.9 NAD(P) transhydrogenase compare
BPHYT_RS29190 -1.1 -2.9 sugar ABC transporter substrate-binding protein compare
BPHYT_RS31805 -1.1 -1.3 beta-lactamase compare
BPHYT_RS04955 -1.1 -1.5 methionyl-tRNA synthetase compare
BPHYT_RS05810 -1.1 -1.9 hypothetical protein compare
BPHYT_RS24565 -1.1 -1.9 membrane protein compare
BPHYT_RS03090 -1.1 -1.1 hypothetical protein compare
BPHYT_RS01950 -1.1 -2.0 phosphoheptose isomerase compare
BPHYT_RS21860 -1.1 -0.9 hypothetical protein compare
BPHYT_RS31155 -1.1 -2.8 AraC family transcriptional regulator compare
BPHYT_RS17760 -1.1 -3.6 ABC transporter permease compare
BPHYT_RS31675 -1.1 -1.4 hypothetical protein compare
BPHYT_RS22990 -1.1 -2.5 nucleobase:cation symporter compare
BPHYT_RS01280 -1.1 -1.1 hypothetical protein compare
BPHYT_RS24005 -1.1 -1.8 L-histidine ABC transporter, permease component 1 (from data) compare
BPHYT_RS21620 -1.1 -0.8 GCN5 family acetyltransferase compare
BPHYT_RS26855 -1.1 -0.7 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS23205 -1.1 -1.5 alkylhydroperoxidase compare
BPHYT_RS01955 -1.1 -2.7 hypothetical protein compare
BPHYT_RS09710 -1.1 -2.1 undecaprenyl-phosphate glucose phosphotransferase compare
BPHYT_RS34780 -1.1 -1.7 phytoene synthase compare
BPHYT_RS14665 -1.1 -1.1 hypothetical protein compare
BPHYT_RS25180 -1.1 -1.5 serine hydroxymethyltransferase compare
BPHYT_RS23525 -1.1 -0.7 hypothetical protein compare
BPHYT_RS05460 -1.1 -1.8 chloroperoxidase compare
BPHYT_RS34815 -1.1 -0.7 ABC transporter compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments