Experiment set39S398 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO7 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS20095 -4.2 -1.2 transcriptional regulator compare
BPHYT_RS01095 -4.1 -1.1 hypothetical protein compare
BPHYT_RS11155 -4.0 -1.1 hypothetical protein compare
BPHYT_RS27430 -3.9 -1.1 LysR family transcriptional regulator compare
BPHYT_RS27060 -3.7 -1.8 photosystem reaction center subunit H compare
BPHYT_RS10240 -3.6 -1.0 translation initiation inhibitor compare
BPHYT_RS25095 -3.5 -1.9 AraC family transcriptional regulator compare
BPHYT_RS24590 -3.5 -1.0 DeoR faimly transcriptional regulator compare
BPHYT_RS09905 -3.3 -0.9 hypothetical protein compare
BPHYT_RS29920 -3.2 -0.9 hypothetical protein compare
BPHYT_RS12925 -3.2 -0.9 exodeoxyribonuclease III compare
BPHYT_RS11745 -2.9 -0.8 (2Fe-2S)-binding protein compare
BPHYT_RS00705 -2.8 -1.9 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS22815 -2.8 -1.7 TonB-denpendent receptor compare
BPHYT_RS34780 -2.8 -1.8 phytoene synthase compare
BPHYT_RS23830 -2.7 -2.2 acetyl-CoA hydrolase compare
BPHYT_RS29720 -2.7 -1.0 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS20440 -2.7 -1.0 IclR family transcriptional regulator compare
BPHYT_RS18610 -2.6 -5.3 lytic transglycosylase compare
BPHYT_RS23760 -2.6 -2.1 phosphonate ABC transporter permease compare
BPHYT_RS11765 -2.6 -0.7 polyamine ABC transporter permease compare
BPHYT_RS29745 -2.6 -2.1 phosphonopyruvate decarboxylase compare
BPHYT_RS14550 -2.6 -0.7 tRNA-Asn compare
BPHYT_RS23650 -2.5 -0.7 hypothetical protein compare
BPHYT_RS18760 -2.5 -1.8 flagellar biosynthesis protein FliT compare
BPHYT_RS35205 -2.5 -2.3 hypothetical protein compare
BPHYT_RS30040 -2.5 -1.0 hypothetical protein compare
BPHYT_RS28535 -2.4 -0.9 response regulator receiver compare
BPHYT_RS05690 -2.4 -1.3 hypothetical protein compare
BPHYT_RS34810 -2.4 -2.8 RND transporter compare
BPHYT_RS26740 -2.4 -1.3 hypothetical protein compare
BPHYT_RS35770 -2.4 -0.9 glyoxalase compare
BPHYT_RS23890 -2.4 -2.5 MFS transporter compare
BPHYT_RS04370 -2.3 -0.6 glycosyl transferase compare
BPHYT_RS02365 -2.3 -1.3 hypothetical protein compare
BPHYT_RS34235 -2.3 -1.5 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) compare
BPHYT_RS24565 -2.3 -2.0 membrane protein compare
BPHYT_RS28485 -2.2 -0.6 GntR family transcriptional regulator compare
BPHYT_RS21620 -2.2 -1.0 GCN5 family acetyltransferase compare
BPHYT_RS33805 -2.2 -0.8 hypothetical protein compare
BPHYT_RS33765 -2.1 -0.6 membrane protein compare
BPHYT_RS08150 -2.1 -0.8 membrane protein compare
BPHYT_RS36385 -2.1 -0.5 TetR family transcriptional regulator compare
BPHYT_RS33460 -2.0 -0.8 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS22455 -2.0 -0.8 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS02765 -2.0 -0.9 cytochrome BD oxidase subunit I compare
BPHYT_RS06975 -2.0 -1.1 glutamate racemase compare
BPHYT_RS29695 -2.0 -1.1 hypothetical protein compare
BPHYT_RS04965 -2.0 -4.7 ATP-binding protein compare
BPHYT_RS14060 -1.9 -0.9 peptidase M23 compare
BPHYT_RS36355 -1.9 -1.3 hypothetical protein compare
BPHYT_RS09315 -1.9 -0.5 chemotaxis protein CheY compare
BPHYT_RS04865 -1.9 -2.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BPHYT_RS35315 -1.9 -1.7 threonyl-tRNA synthetase compare
BPHYT_RS13815 -1.9 -2.7 hypothetical protein compare
BPHYT_RS21335 -1.9 -1.1 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS13390 -1.9 -0.7 IclR family transcriptional regulator compare
BPHYT_RS29185 -1.8 -1.0 sugar ABC transporter permease compare
BPHYT_RS09895 -1.8 -1.1 LysR family transcriptional regulator compare
BPHYT_RS25015 -1.8 -2.0 XRE family transcriptional regulator compare
BPHYT_RS34085 -1.8 -1.3 polyamine ABC transporter permease compare
BPHYT_RS13450 -1.8 -1.1 GntR family transcriptional regulator compare
BPHYT_RS02005 -1.8 -1.2 diguanylate phosphodiesterase compare
BPHYT_RS30020 -1.8 -1.9 arsenic transporter compare
BPHYT_RS16085 -1.8 -2.2 DeoR faimly transcriptional regulator compare
BPHYT_RS00815 -1.8 -1.1 hypothetical protein compare
BPHYT_RS11795 -1.8 -0.7 membrane protein compare
BPHYT_RS36435 -1.8 -1.3 hypothetical protein compare
BPHYT_RS31260 -1.8 -1.1 histidine kinase compare
BPHYT_RS30140 -1.7 -0.7 3-methylitaconate isomerase compare
BPHYT_RS33850 -1.7 -0.6 sporulation protein compare
BPHYT_RS18705 -1.7 -1.1 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS34080 -1.7 -2.2 flagellar motor protein MotB compare
BPHYT_RS22835 -1.7 -0.9 flagellar motor protein MotA compare
BPHYT_RS04335 -1.7 -0.8 membrane protein compare
BPHYT_RS30340 -1.7 -1.3 AraC family transcriptional regulator compare
BPHYT_RS16555 -1.7 -2.6 cation transporter compare
BPHYT_RS11325 -1.6 -4.9 voltage-gated chloride channel protein ClcB compare
BPHYT_RS22360 -1.6 -1.1 response regulator receiver compare
BPHYT_RS01625 -1.6 -1.5 chemotaxis protein CheY compare
BPHYT_RS03155 -1.6 -2.5 histidine triad (HIT) protein compare
BPHYT_RS12510 -1.6 -1.0 RNA-binding protein compare
BPHYT_RS32210 -1.6 -0.9 hypothetical protein compare
BPHYT_RS15615 -1.6 -2.3 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
BPHYT_RS03240 -1.6 -2.1 formate dehydrogenase accessory protein FdhD compare
BPHYT_RS07325 -1.6 -0.4 GntR family transcriptional regulator compare
BPHYT_RS25470 -1.5 -0.8 alkylhydroperoxidase compare
BPHYT_RS07515 -1.5 -0.8 photosystem reaction center subunit H compare
BPHYT_RS24285 -1.5 -1.2 TetR family transcriptional regulator compare
BPHYT_RS29800 -1.5 -1.2 hypothetical protein compare
BPHYT_RS30605 -1.5 -3.0 MlrC domain-containing protein compare
BPHYT_RS07400 -1.5 -1.4 hypothetical protein compare
BPHYT_RS32260 -1.5 -0.5 hypothetical protein compare
BPHYT_RS26975 -1.5 -0.9 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS09970 -1.5 -1.4 glutathione S-transferase compare
BPHYT_RS31540 -1.5 -2.3 chloride channel protein compare
BPHYT_RS02860 -1.5 -0.4 membrane protein compare
BPHYT_RS11565 -1.5 -1.7 nitrate reductase compare
BPHYT_RS25290 -1.4 -1.8 membrane protein compare
BPHYT_RS25320 -1.4 -2.2 cobalamin biosynthesis protein CobW compare
BPHYT_RS22530 -1.4 -1.0 N5,N10-methylene tetrahydromethanopterin reductase compare
BPHYT_RS26435 -1.4 -0.8 hypothetical protein compare
BPHYT_RS26010 -1.4 -2.3 ABC transporter substrate-binding protein compare
BPHYT_RS05625 -1.4 -1.8 hypothetical protein compare
BPHYT_RS16475 -1.4 -1.9 hypothetical protein compare
BPHYT_RS09585 -1.4 -0.9 hypothetical protein compare
BPHYT_RS26900 -1.4 -2.9 isoprenylcysteine carboxyl methyltransferase compare
BPHYT_RS22910 -1.4 -0.4 hypothetical protein compare
BPHYT_RS04330 -1.4 -4.9 hypothetical protein compare
BPHYT_RS21805 -1.4 -1.7 transcriptional regulator compare
BPHYT_RS24655 -1.4 -1.0 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS23770 -1.4 -1.0 GntR family transcriptional regulator compare
BPHYT_RS19905 -1.4 -1.1 membrane protein compare
BPHYT_RS13895 -1.3 -1.8 sugar ABC transporter substrate-binding protein compare
BPHYT_RS26825 -1.3 -1.7 quercetin 2,3-dioxygenase compare
BPHYT_RS28885 -1.3 -0.9 betaine-aldehyde dehydrogenase compare
BPHYT_RS28690 -1.3 -1.5 diguanylate phosphodiesterase compare
BPHYT_RS36245 -1.3 -2.0 hypothetical protein compare
BPHYT_RS21530 -1.3 -1.2 RNA polymerase subunit sigma-24 compare
BPHYT_RS08995 -1.3 -0.7 hypothetical protein compare
BPHYT_RS36130 -1.3 -0.8 hypothetical protein compare
BPHYT_RS16025 -1.3 -2.5 Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data) compare
BPHYT_RS23730 -1.3 -1.3 multidrug DMT transporter permease compare
BPHYT_RS02570 -1.3 -3.2 phosphocarrier protein HPr compare
BPHYT_RS10765 -1.3 -1.5 amidase compare
BPHYT_RS04920 -1.3 -1.5 aspartate 1-decarboxylase compare
BPHYT_RS09960 -1.3 -2.7 short-chain dehydrogenase compare
BPHYT_RS28945 -1.3 -1.5 endo-1,4-D-glucanase compare
BPHYT_RS30010 -1.3 -0.9 cell division protein compare
BPHYT_RS10005 -1.3 -0.9 hypothetical protein compare
BPHYT_RS13185 -1.3 -1.5 2,4-dienoyl-CoA reductase compare
BPHYT_RS01340 -1.3 -1.1 ChrB domain-containing protein compare
BPHYT_RS06990 -1.2 -0.5 membrane protein compare
BPHYT_RS23270 -1.2 -0.7 enoyl-CoA hydratase compare
BPHYT_RS23120 -1.2 -2.3 FAD-dependent oxidoreductase compare
BPHYT_RS11530 -1.2 -1.4 5-hydroxyisourate hydrolase compare
BPHYT_RS29300 -1.2 -1.5 endoribonuclease L-PSP compare
BPHYT_RS28480 -1.2 -1.4 hydroxyglutarate oxidase compare
BPHYT_RS31110 -1.2 -1.4 hypothetical protein compare
BPHYT_RS05005 -1.2 -1.5 hypothetical protein compare
BPHYT_RS29810 -1.2 -0.7 hexapeptide transferase compare
BPHYT_RS27505 -1.2 -1.3 hypothetical protein compare
BPHYT_RS19130 -1.2 -2.2 acetyltransferase compare
BPHYT_RS35235 -1.2 -1.6 amino acid transporter compare
BPHYT_RS14920 -1.2 -1.1 hypothetical protein compare
BPHYT_RS16195 -1.2 -1.6 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS03130 -1.2 -1.8 hypothetical protein compare
BPHYT_RS13935 -1.2 -1.0 mannosyltransferase compare
BPHYT_RS11960 -1.2 -0.5 MarR family transcriptional regulator compare
BPHYT_RS32225 -1.2 -1.5 hypothetical protein compare
BPHYT_RS25515 -1.2 -1.0 glutathione S-transferase compare
BPHYT_RS10305 -1.2 -0.8 hypothetical protein compare
BPHYT_RS15465 -1.1 -2.0 tRNA-Gly compare
BPHYT_RS11110 -1.1 -2.8 chemotaxis protein CheY compare
BPHYT_RS31130 -1.1 -1.4 hypothetical protein compare
BPHYT_RS17830 -1.1 -2.2 histidine kinase compare
BPHYT_RS05705 -1.1 -0.7 hypothetical protein compare
BPHYT_RS30120 -1.1 -0.8 heavy metal transporter compare
BPHYT_RS02575 -1.1 -4.3 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS12265 -1.1 -0.7 alanine acetyltransferase compare
BPHYT_RS24255 -1.1 -1.5 hypothetical protein compare
BPHYT_RS23205 -1.1 -1.4 alkylhydroperoxidase compare
BPHYT_RS28075 -1.1 -0.6 cytochrome B561 compare
BPHYT_RS10215 -1.1 -0.6 sulfate transporter compare
BPHYT_RS36145 -1.1 -1.2 hypothetical protein compare
BPHYT_RS33580 -1.1 -2.2 geranyltranstransferase compare
BPHYT_RS03580 -1.1 -1.6 RNA-binding protein S4 compare
BPHYT_RS26510 -1.1 -0.7 transcriptional regulator compare
BPHYT_RS22765 -1.1 -1.4 beta-galactosidase compare
BPHYT_RS00585 -1.1 -1.3 hypothetical protein compare
BPHYT_RS21235 -1.1 -1.4 hypothetical protein compare
BPHYT_RS11825 -1.1 -0.6 cytosine deaminase compare
BPHYT_RS27860 -1.1 -0.9 membrane protein compare
BPHYT_RS23480 -1.1 -1.3 hypothetical protein compare
BPHYT_RS19545 -1.1 -2.0 nuclear protein SET compare
BPHYT_RS21615 -1.1 -1.1 FMN-dependent NADH-azoreductase compare
BPHYT_RS04365 -1.1 -5.3 membrane protein compare
BPHYT_RS22715 -1.1 -1.3 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) (from data) compare
BPHYT_RS09100 -1.1 -4.2 stationary phase survival protein SurE compare
BPHYT_RS35250 -1.1 -1.4 alcohol dehydrogenase compare
BPHYT_RS27410 -1.0 -0.9 amidohydrolase compare
BPHYT_RS04350 -1.0 -5.3 membrane protein compare
BPHYT_RS33045 -1.0 -0.8 response regulator receiver protein compare
BPHYT_RS20810 -1.0 -3.0 ABC transporter permease compare
BPHYT_RS25230 -1.0 -1.6 formyltetrahydrofolate deformylase compare
BPHYT_RS35615 -1.0 -1.3 hypothetical protein compare
BPHYT_RS09890 -1.0 -1.9 choline dehydrogenase compare
BPHYT_RS36365 -1.0 -0.7 hypothetical protein compare
BPHYT_RS26925 -1.0 -0.8 NIPSNAP family containing protein compare
BPHYT_RS33125 -1.0 -1.3 hypothetical protein compare
BPHYT_RS34655 -1.0 -0.8 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS07250 -1.0 -2.7 4-hydroxy-2-oxovalerate aldolase compare
BPHYT_RS28245 -1.0 -0.8 MFS transporter compare
BPHYT_RS04285 -1.0 -0.5 rhamnosyltransferase compare
BPHYT_RS05235 -1.0 -0.9 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase compare
BPHYT_RS26330 -1.0 -1.2 hypothetical protein compare
BPHYT_RS29110 -1.0 -1.7 DNA-directed DNA polymerase compare
BPHYT_RS08020 -1.0 -1.4 hypothetical protein compare
BPHYT_RS07595 -1.0 -0.8 membrane protein compare
BPHYT_RS26355 -1.0 -0.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments