Experiment set39S398 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO7 MOI 1

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS11705 +3.9 2.8 hypothetical protein compare
BPHYT_RS12615 +3.0 1.4 dihydrodipicolinate synthase compare
BPHYT_RS14140 +2.7 6.3 phosphate transporter permease subunit PstC compare
BPHYT_RS33920 +2.7 19.0 type II citrate synthase compare
BPHYT_RS33820 +2.6 24.6 histidine kinase compare
BPHYT_RS19565 +2.5 19.0 gamma-glutamyl:cysteine ligase compare
BPHYT_RS12845 +2.5 19.0 ATPase compare
BPHYT_RS16180 +2.4 1.5 TetR family transcriptional regulator compare
BPHYT_RS19570 +2.3 19.5 sodium/hydrogen exchanger compare
BPHYT_RS06530 +2.3 2.6 membrane protein compare
BPHYT_RS06175 +2.2 6.1 LPS biosynthesis compare
BPHYT_RS09330 +2.2 18.8 phytoene synthase compare
BPHYT_RS18655 +2.2 6.4 3-oxoacyl-ACP synthase compare
BPHYT_RS26570 +2.2 2.3 5'-nucleotidase compare
BPHYT_RS14400 +2.2 7.1 anti-sigma factor compare
BPHYT_RS23910 +2.1 5.5 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS05155 +2.1 8.2 acetyltransferase GCN5 compare
BPHYT_RS25935 +2.1 3.2 type III secretion protein compare
BPHYT_RS04945 +2.1 17.6 membrane protein compare
BPHYT_RS11685 +2.0 1.8 phasin family protein compare
BPHYT_RS02595 +2.0 4.0 sulfurtransferase compare
BPHYT_RS09500 +2.0 9.5 glucose-6-phosphate isomerase compare
BPHYT_RS13200 +2.0 4.1 molybdopterin binding oxidoreductase compare
BPHYT_RS05575 +2.0 16.3 Fis family transcriptional regulator compare
BPHYT_RS14395 +2.0 10.6 sugar dehydratase compare
BPHYT_RS06075 +2.0 9.5 hypothetical protein compare
BPHYT_RS05560 +2.0 9.4 Fis family transcriptional regulator compare
BPHYT_RS31400 +1.9 2.2 methyl-accepting chemotaxis protein compare
BPHYT_RS25870 +1.9 1.0 type III secretion system ATPase compare
BPHYT_RS06985 +1.9 6.4 fumarate hydratase compare
BPHYT_RS17095 +1.9 5.2 proline--tRNA ligase compare
BPHYT_RS13645 +1.9 16.1 threonine--tRNA ligase compare
BPHYT_RS04950 +1.8 16.3 hypothetical protein compare
BPHYT_RS12725 +1.8 14.6 regulator compare
BPHYT_RS30995 +1.8 0.9 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS14755 +1.7 3.4 tRNA (guanine-N(1)-)-methyltransferase compare
BPHYT_RS05590 +1.7 13.3 trehalose-6-phosphate synthase compare
BPHYT_RS10750 +1.6 1.4 LysR family transcriptional regulator compare
BPHYT_RS25875 +1.6 1.1 type III secretion protein compare
BPHYT_RS08130 +1.6 2.0 transposase compare
BPHYT_RS15890 +1.6 1.2 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS10270 +1.5 3.1 D-amino acid dehydrogenase compare
BPHYT_RS02905 +1.5 14.5 RNA polymerase subunit sigma-54 compare
BPHYT_RS07840 +1.5 1.9 muconate cycloisomerase compare
BPHYT_RS17890 +1.5 1.1 shikimate kinase compare
BPHYT_RS02880 +1.5 1.9 ATP-dependent protease compare
BPHYT_RS05610 +1.5 10.2 DNA-cytosine methyltransferase compare
BPHYT_RS04940 +1.5 2.8 hypothetical protein compare
BPHYT_RS10320 +1.5 3.0 hypothetical protein compare
BPHYT_RS09160 +1.5 4.7 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS31060 +1.5 1.9 capsular polysaccharide biosynthesis protein compare
BPHYT_RS33990 +1.4 1.4 ATPase compare
BPHYT_RS12150 +1.4 9.4 PII uridylyl-transferase compare
BPHYT_RS08945 +1.4 8.8 hypothetical protein compare
BPHYT_RS31910 +1.4 1.3 hypothetical protein compare
BPHYT_RS06685 +1.4 4.2 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS23230 +1.4 1.5 histidine kinase compare
BPHYT_RS08850 +1.4 0.5 transcriptional regulator compare
BPHYT_RS33615 +1.4 2.7 decarboxylase compare
BPHYT_RS09660 +1.4 9.7 trehalose-6-phosphate synthase compare
BPHYT_RS05615 +1.4 1.2 hypothetical protein compare
BPHYT_RS01435 +1.4 12.3 LysR family transcriptional regulator compare
BPHYT_RS08250 +1.4 1.7 hypothetical protein compare
BPHYT_RS25885 +1.4 2.1 type III secretion protein compare
BPHYT_RS29620 +1.4 1.1 hypothetical protein compare
BPHYT_RS14145 +1.4 6.3 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS18710 +1.3 2.0 membrane protein compare
BPHYT_RS30450 +1.3 1.0 ABC transporter permease compare
BPHYT_RS16175 +1.3 0.6 hemolysin D compare
BPHYT_RS24585 +1.3 1.5 NUDIX hydrolase compare
BPHYT_RS19985 +1.3 1.1 CoA-transferase compare
BPHYT_RS31615 +1.3 1.5 thiamine pyrophosphate protein compare
BPHYT_RS28000 +1.3 1.8 permease compare
BPHYT_RS08765 +1.3 1.0 ABC transporter ATP-binding protein compare
BPHYT_RS05010 +1.3 3.5 RpiR family transcriptional regulator compare
BPHYT_RS14865 +1.3 0.8 UDP-glucose 6-dehydrogenase compare
BPHYT_RS15620 +1.3 2.9 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS01505 +1.3 2.9 7-cyano-7-deazaguanine reductase compare
BPHYT_RS09645 +1.3 2.0 ankyrin compare
BPHYT_RS27295 +1.3 1.7 hypothetical protein compare
BPHYT_RS26385 +1.2 1.5 glutamine amidotransferase compare
BPHYT_RS03400 +1.2 0.6 ATP-dependent DNA helicase RecG compare
BPHYT_RS20150 +1.2 1.4 glycosyl transferase family 1 compare
BPHYT_RS03620 +1.2 7.4 poly(A) polymerase compare
BPHYT_RS32395 +1.2 0.8 hypothetical protein compare
BPHYT_RS33515 +1.2 6.9 porin compare
BPHYT_RS22230 +1.2 1.7 LuxR family transcriptional regulator compare
BPHYT_RS16840 +1.2 2.7 transketolase compare
BPHYT_RS11815 +1.2 1.5 alcohol dehydrogenase compare
BPHYT_RS31515 +1.2 2.8 agmatinase compare
BPHYT_RS21700 +1.2 2.2 phosphotransacetylase compare
BPHYT_RS12825 +1.2 2.2 phasin family protein compare
BPHYT_RS09815 +1.2 1.5 malate synthase compare
BPHYT_RS11125 +1.2 1.2 alkylhydroperoxidase compare
BPHYT_RS28350 +1.2 2.5 fatty acid desaturase compare
BPHYT_RS04095 +1.2 1.3 SAM-dependent methyltransferase PhcB compare
BPHYT_RS21585 +1.2 2.3 short-chain dehydrogenase compare
BPHYT_RS17100 +1.2 3.6 RNA pyrophosphohydrolase compare
BPHYT_RS01965 +1.2 1.7 tRNA-Ala compare
BPHYT_RS06375 +1.2 2.1 ribonuclease compare
BPHYT_RS10540 +1.2 1.1 secretion protein compare
BPHYT_RS18910 +1.2 1.1 FlgN compare
BPHYT_RS34185 +1.2 5.0 cold-shock protein compare
BPHYT_RS15325 +1.2 2.2 ribonuclease PH compare
BPHYT_RS05670 +1.2 2.2 hypothetical protein compare
BPHYT_RS26770 +1.1 2.2 histidine kinase compare
BPHYT_RS07480 +1.1 1.0 FAD-dependent oxidoreductase compare
BPHYT_RS24580 +1.1 1.2 hypothetical protein compare
BPHYT_RS14485 +1.1 4.5 ribonuclease E compare
BPHYT_RS07255 +1.1 1.3 4-oxalocrotonate decarboxylase compare
BPHYT_RS00055 +1.1 2.3 hypothetical protein compare
BPHYT_RS31225 +1.1 1.7 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS00150 +1.1 2.7 DEAD/DEAH box helicase compare
BPHYT_RS21460 +1.1 1.8 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS13470 +1.1 0.7 arylsulfate sulfotransferase compare
BPHYT_RS17905 +1.1 1.8 fimbrial assembly family protein compare
BPHYT_RS25845 +1.1 0.8 RND transporter MFP subunit compare
BPHYT_RS18255 +1.1 1.8 phenylacetate-CoA oxygenase subunit PaaB compare
BPHYT_RS26715 +1.1 2.3 GTP-binding protein compare
BPHYT_RS06390 +1.1 2.2 ribosome-associated protein IOJAP compare
BPHYT_RS06600 +1.1 1.7 polynucleotide phosphorylase/polyadenylase compare
BPHYT_RS07290 +1.1 2.4 hypothetical protein compare
BPHYT_RS16570 +1.1 1.6 glutathione S-transferase compare
BPHYT_RS32200 +1.1 1.8 lytic transglycosylase compare
BPHYT_RS07665 +1.1 2.7 hypothetical protein compare
BPHYT_RS28670 +1.1 1.3 MFS transporter compare
BPHYT_RS30160 +1.1 1.7 AraC family transcriptional regulator compare
BPHYT_RS25785 +1.1 4.0 sugar ABC transporter permease compare
BPHYT_RS02665 +1.1 6.3 MFS transporter compare
BPHYT_RS16420 +1.1 2.6 copper resistance protein CopD compare
BPHYT_RS26300 +1.1 1.0 ATP-dependent DNA ligase compare
BPHYT_RS08335 +1.0 1.0 hypothetical protein compare
BPHYT_RS03625 +1.0 6.5 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS10560 +1.0 3.3 hypothetical protein compare
BPHYT_RS19945 +1.0 1.6 hypothetical protein compare
BPHYT_RS21025 +1.0 1.1 cation-binding protein compare
BPHYT_RS06070 +1.0 8.0 cytochrome C compare
BPHYT_RS15865 +1.0 1.8 exodeoxyribonuclease VII large subunit compare
BPHYT_RS14855 +1.0 0.4 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS24955 +1.0 1.0 cytochrome C peroxidase compare
BPHYT_RS27145 +1.0 1.3 TetR family transcriptional regulator compare
BPHYT_RS19610 +1.0 1.1 general secretion pathway protein GspC compare
BPHYT_RS15710 +1.0 0.4 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS22580 +1.0 4.1 transcriptional regulator compare
BPHYT_RS28900 +1.0 1.4 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
BPHYT_RS26750 +1.0 1.3 aldolase compare
BPHYT_RS10850 +1.0 0.8 LysR family transcriptional regulator compare
BPHYT_RS18415 +1.0 2.4 hypothetical protein compare
BPHYT_RS14845 +1.0 0.5 cysteine synthase compare
BPHYT_RS06940 +1.0 2.3 peroxiredoxin compare
BPHYT_RS12985 +1.0 0.6 amino acid acetyltransferase compare
BPHYT_RS21330 +1.0 1.0 hypothetical protein compare
BPHYT_RS02525 +1.0 5.3 membrane protein compare
BPHYT_RS28620 +1.0 1.2 enoyl-CoA hydratase compare
BPHYT_RS28180 +1.0 2.7 ABC transporter permease compare
BPHYT_RS21645 +1.0 2.4 LysR family transcriptional regulator compare
BPHYT_RS02530 +1.0 4.9 hypothetical protein compare
BPHYT_RS11335 +1.0 1.8 hypothetical protein compare
BPHYT_RS08455 +1.0 6.0 ribonuclease R compare
BPHYT_RS12535 +1.0 0.7 membrane protein compare
BPHYT_RS10145 +1.0 3.0 Mn-containing catalase compare
BPHYT_RS09265 +1.0 1.2 chemotaxis protein CheY compare
BPHYT_RS07705 +1.0 1.8 arginine succinyltransferase compare
BPHYT_RS04290 +1.0 0.5 glycosyl transferase family 2 compare
BPHYT_RS20715 +1.0 1.0 peptidase compare
BPHYT_RS28540 +1.0 4.2 amino acid ABC substrate-binding protein compare
BPHYT_RS22125 +1.0 1.7 hypothetical protein compare
BPHYT_RS34490 +1.0 0.8 hypothetical protein compare
BPHYT_RS17885 +1.0 3.5 3-dehydroquinate synthase compare
BPHYT_RS03900 +1.0 1.1 phospholipid-binding protein compare
BPHYT_RS27175 +1.0 0.9 DNA-binding protein compare
BPHYT_RS16290 +0.9 1.3 hypothetical protein compare
BPHYT_RS03830 +0.9 1.5 hypothetical protein compare
BPHYT_RS22880 +0.9 2.4 hypothetical protein compare
BPHYT_RS07925 +0.9 1.8 glutamine amidotransferase compare
BPHYT_RS02640 +0.9 6.7 cytochrome C oxidase compare
BPHYT_RS29235 +0.9 1.6 cell shape determination protein CcmA compare
BPHYT_RS20055 +0.9 1.3 hypothetical protein compare
BPHYT_RS04820 +0.9 2.4 LysR family transcriptional regulator compare
BPHYT_RS24270 +0.9 1.2 C4-dicarboxylate ABC transporter substrate-binding protein compare
BPHYT_RS18630 +0.9 1.0 allophanate hydrolase compare
BPHYT_RS06385 +0.9 2.2 ribosomal RNA large subunit methyltransferase H compare
BPHYT_RS36000 +0.9 1.6 hypothetical protein compare
BPHYT_RS24135 +0.9 1.4 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS06500 +0.9 1.7 LOG family protein compare
BPHYT_RS05895 +0.9 0.7 hypothetical protein compare
BPHYT_RS17545 +0.9 3.4 cold-shock protein compare
BPHYT_RS17640 +0.9 0.6 2-alkenal reductase compare
BPHYT_RS06550 +0.9 1.0 acetolactate synthase compare
BPHYT_RS07390 +0.9 1.4 transmembrane protein compare
BPHYT_RS31430 +0.9 2.4 FAD-dependent oxidoreductase compare
BPHYT_RS08405 +0.9 1.1 hypothetical protein compare
BPHYT_RS06155 +0.9 3.0 DEAD/DEAH box helicase compare
BPHYT_RS05025 +0.9 1.0 sugar ABC transporter substrate-binding protein compare
BPHYT_RS33170 +0.9 1.4 acetyltransferase compare
BPHYT_RS05835 +0.9 1.8 hypothetical protein compare
BPHYT_RS32250 +0.9 1.2 membrane protein compare
BPHYT_RS31840 +0.9 1.8 anhydrase compare
BPHYT_RS32525 +0.9 1.1 hypothetical protein compare
BPHYT_RS17490 +0.9 1.3 haloacid dehalogenase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments