Experiment set39S371 for Burkholderia phytofirmans PsJN

Compare to:

36hr Phyto Lib Only

200 most important genes:

  gene name fitness t score description  
BPHYT_RS10675 -4.3 -1.3 muconate cycloisomerase compare
BPHYT_RS11970 -4.1 -1.3 cupin compare
BPHYT_RS13160 -4.0 -1.2 membrane protein compare
BPHYT_RS19985 -3.4 -1.1 CoA-transferase compare
BPHYT_RS10135 -3.0 -0.9 hypothetical protein compare
BPHYT_RS08665 -3.0 -0.9 hypothetical protein compare
BPHYT_RS12510 -2.9 -1.5 RNA-binding protein compare
BPHYT_RS29920 -2.9 -0.9 hypothetical protein compare
BPHYT_RS09465 -2.8 -1.5 transcriptional regulator compare
BPHYT_RS28300 -2.8 -0.9 histone nucleoid-structuring protein H-NS compare
BPHYT_RS21620 -2.6 -1.2 GCN5 family acetyltransferase compare
BPHYT_RS31050 -2.6 -0.8 epimerase compare
BPHYT_RS11310 -2.6 -1.1 LysR family transcriptional regulator compare
BPHYT_RS12925 -2.6 -0.8 exodeoxyribonuclease III compare
BPHYT_RS09895 -2.6 -1.1 LysR family transcriptional regulator compare
BPHYT_RS11400 -2.6 -1.9 hypothetical protein compare
BPHYT_RS21905 -2.5 -0.8 IclR family transcriptional regulator compare
BPHYT_RS32750 -2.5 -1.1 lipoprotein compare
BPHYT_RS21170 -2.5 -1.6 LysR family transcriptional regulator compare
BPHYT_RS21335 -2.4 -1.1 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS20590 -2.3 -2.1 methionine sulfoxide reductase A compare
BPHYT_RS11635 -2.2 -0.7 RNA polymerase subunit sigma-24 compare
BPHYT_RS11155 -2.2 -1.0 hypothetical protein compare
BPHYT_RS07480 -2.2 -1.0 FAD-dependent oxidoreductase compare
BPHYT_RS14060 -2.2 -1.1 peptidase M23 compare
BPHYT_RS02765 -2.1 -1.1 cytochrome BD oxidase subunit I compare
BPHYT_RS07760 -2.1 -1.0 diguanylate phosphodiesterase compare
BPHYT_RS28705 -2.1 -1.1 IclR family transcriptional regulator compare
BPHYT_RS25220 -2.1 -2.3 ferredoxin oxidoreductase compare
BPHYT_RS01485 -2.1 -1.1 histidine kinase compare
BPHYT_RS35835 -2.0 -2.1 hypothetical protein compare
BPHYT_RS16085 -2.0 -2.4 DeoR faimly transcriptional regulator compare
BPHYT_RS22955 -2.0 -1.9 isoprenylcysteine carboxyl methyltransferase compare
BPHYT_RS18660 -2.0 -1.4 hypothetical protein compare
BPHYT_RS03280 -2.0 -0.9 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS26025 -1.9 -0.6 hypothetical protein compare
BPHYT_RS33805 -1.9 -0.8 hypothetical protein compare
BPHYT_RS32210 -1.9 -1.0 hypothetical protein compare
BPHYT_RS22910 -1.8 -0.6 hypothetical protein compare
BPHYT_RS29745 -1.8 -1.3 phosphonopyruvate decarboxylase compare
BPHYT_RS02130 -1.8 -1.9 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS28910 -1.8 -1.3 diguanylate phosphodiesterase compare
BPHYT_RS25140 -1.8 -0.9 hypothetical protein compare
BPHYT_RS23940 -1.8 -0.8 GntR family transcriptional regulator compare
BPHYT_RS20130 -1.8 -1.5 diguanylate phosphodiesterase compare
BPHYT_RS27995 -1.8 -1.4 hypothetical protein compare
BPHYT_RS20235 -1.7 -4.1 iron ABC transporter compare
BPHYT_RS09930 -1.7 -1.2 LysR family transcriptional regulator compare
BPHYT_RS28920 -1.7 -0.9 cellulose synthase compare
BPHYT_RS23880 -1.7 -0.9 sugar ABC transporter permease compare
BPHYT_RS30775 -1.7 -1.3 gluconate 2-dehydrogenase compare
BPHYT_RS13390 -1.7 -0.7 IclR family transcriptional regulator compare
BPHYT_RS26185 -1.7 -0.7 thioesterase compare
BPHYT_RS36220 -1.7 -0.9 hypothetical protein compare
BPHYT_RS20245 -1.7 -2.9 iron ABC transporter substrate-binding protein compare
BPHYT_RS07595 -1.7 -1.2 membrane protein compare
BPHYT_RS04595 -1.6 -1.2 cytoplasmic protein compare
BPHYT_RS25845 -1.6 -0.7 RND transporter MFP subunit compare
BPHYT_RS20840 -1.6 -1.6 beta-lactamase compare
BPHYT_RS01625 -1.6 -1.5 chemotaxis protein CheY compare
BPHYT_RS31125 -1.6 -1.8 hypothetical protein compare
BPHYT_RS05290 -1.6 -0.7 hypothetical protein compare
BPHYT_RS18610 -1.6 -3.6 lytic transglycosylase compare
BPHYT_RS03655 -1.5 -0.9 membrane protein compare
BPHYT_RS25780 -1.5 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS08165 -1.5 -1.1 pilus assembly protein TadE compare
BPHYT_RS20880 -1.5 -0.9 polyketide cyclase compare
BPHYT_RS14865 -1.5 -1.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS14840 -1.5 -4.8 lytic transglycosylase compare
BPHYT_RS13735 -1.5 -2.2 membrane protein compare
BPHYT_RS22930 -1.5 -0.6 type II secretion system protein compare
BPHYT_RS08150 -1.5 -0.6 membrane protein compare
BPHYT_RS07050 -1.5 -1.1 membrane protein compare
BPHYT_RS31545 -1.5 -1.5 membrane protein compare
BPHYT_RS09655 -1.5 -3.6 mechanosensitive ion channel protein MscS compare
BPHYT_RS29175 -1.4 -1.6 ABC transporter ATP-binding protein compare
BPHYT_RS36130 -1.4 -0.9 hypothetical protein compare
BPHYT_RS32675 -1.4 -1.0 2-methylcitrate dehydratase compare
BPHYT_RS10100 -1.4 -2.7 dihydroxy-acid dehydratase compare
BPHYT_RS31760 -1.4 -2.7 aryldialkylphosphatase compare
BPHYT_RS06105 -1.4 -0.8 hypothetical protein compare
BPHYT_RS04910 -1.4 -0.8 phenylacetic acid degradation protein compare
BPHYT_RS02570 -1.4 -6.8 phosphocarrier protein HPr compare
BPHYT_RS27160 -1.4 -0.8 hypothetical protein compare
BPHYT_RS11335 -1.4 -2.2 hypothetical protein compare
BPHYT_RS28025 -1.4 -0.9 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS34085 -1.4 -1.0 polyamine ABC transporter permease compare
BPHYT_RS28680 -1.3 -1.3 porin compare
BPHYT_RS14245 -1.3 -0.6 membrane protein compare
BPHYT_RS03410 -1.3 -1.1 queuine tRNA-ribosyltransferase compare
BPHYT_RS31840 -1.3 -1.1 anhydrase compare
BPHYT_RS35205 -1.3 -1.6 hypothetical protein compare
BPHYT_RS31650 -1.3 -1.0 FAD-binding protein compare
BPHYT_RS08130 -1.3 -0.9 transposase compare
BPHYT_RS06950 -1.3 -1.7 LysR family transcriptional regulator compare
BPHYT_RS33615 -1.3 -1.5 decarboxylase compare
BPHYT_RS29945 -1.3 -0.9 histidine kinase compare
BPHYT_RS10535 -1.3 -1.9 DSBA oxidoreductase compare
BPHYT_RS22260 -1.3 -1.0 hypothetical protein compare
BPHYT_RS29520 -1.3 -0.6 hypothetical protein compare
BPHYT_RS13265 -1.3 -2.4 hypothetical protein compare
BPHYT_RS28905 -1.3 -0.8 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS14665 -1.3 -1.4 hypothetical protein compare
BPHYT_RS22360 -1.3 -0.9 response regulator receiver compare
BPHYT_RS02285 -1.3 -3.3 cell division protein compare
BPHYT_RS05565 -1.3 -1.1 membrane protein compare
BPHYT_RS11680 -1.2 -0.8 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS34810 -1.2 -1.7 RND transporter compare
BPHYT_RS16555 -1.2 -2.0 cation transporter compare
BPHYT_RS24925 -1.2 -1.0 cytochrome O ubiquinol oxidase compare
BPHYT_RS11150 -1.2 -1.1 LysR family transcriptional regulator compare
BPHYT_RS09100 -1.2 -2.6 stationary phase survival protein SurE compare
BPHYT_RS02040 -1.2 -2.6 hypothetical protein compare
BPHYT_RS22750 -1.2 -1.6 Flagellar brake protein YcgR 2 compare
BPHYT_RS36385 -1.2 -0.5 TetR family transcriptional regulator compare
BPHYT_RS02415 -1.2 -2.3 cytochrome C550 compare
BPHYT_RS26080 -1.2 -0.5 ABC transporter ATPase compare
BPHYT_RS31950 -1.2 -1.2 short-chain dehydrogenase compare
BPHYT_RS10750 -1.2 -0.5 LysR family transcriptional regulator compare
BPHYT_RS27405 -1.2 -1.4 aldehyde dehydrogenase compare
BPHYT_RS07335 -1.2 -2.1 nitrate ABC transporter permease compare
BPHYT_RS17765 -1.1 -3.5 toluene ABC transporter ATP-binding protein compare
BPHYT_RS24315 -1.1 -0.8 phosphoribosyltransferase compare
BPHYT_RS29990 -1.1 -3.2 hypothetical protein compare
BPHYT_RS04630 -1.1 -1.4 amino acid ABC transporter permease compare
BPHYT_RS09280 -1.1 -0.5 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS31805 -1.1 -1.9 beta-lactamase compare
BPHYT_RS28350 -1.1 -1.2 fatty acid desaturase compare
BPHYT_RS15070 -1.1 -2.5 amidase compare
BPHYT_RS21530 -1.1 -0.9 RNA polymerase subunit sigma-24 compare
BPHYT_RS26260 -1.1 -1.7 histidine kinase compare
BPHYT_RS26400 -1.1 -1.4 sodium:solute symporter compare
BPHYT_RS30745 -1.1 -1.2 hypothetical protein compare
BPHYT_RS11535 -1.1 -1.5 membrane protein compare
BPHYT_RS31415 -1.1 -0.8 amino acid ABC transporter permease compare
BPHYT_RS02135 -1.1 -1.2 glyoxylate reductase compare
BPHYT_RS19335 -1.1 -0.7 hypothetical protein compare
BPHYT_RS22815 -1.1 -1.0 TonB-denpendent receptor compare
BPHYT_RS23425 -1.1 -1.9 mannitol dehydrogenase compare
BPHYT_RS10540 -1.1 -0.6 secretion protein compare
BPHYT_RS26510 -1.1 -0.7 transcriptional regulator compare
BPHYT_RS34780 -1.1 -1.6 phytoene synthase compare
BPHYT_RS35315 -1.1 -1.1 threonyl-tRNA synthetase compare
BPHYT_RS03645 -1.1 -1.2 tRNA dimethylallyltransferase compare
BPHYT_RS10695 -1.1 -0.7 aromatic-ring-hydroxylating dioxygenase subunit beta compare
BPHYT_RS04560 -1.0 -1.3 Hcp1 family type VI secretion system effector compare
BPHYT_RS18910 -1.0 -0.7 FlgN compare
BPHYT_RS25805 -1.0 -2.0 deoxyribose kinase (EC 2.7.1.15) (from data) compare
BPHYT_RS24670 -1.0 -1.0 ABC transporter permease compare
BPHYT_RS25870 -1.0 -0.4 type III secretion system ATPase compare
BPHYT_RS14345 -1.0 -1.9 beta-hexosaminidase compare
BPHYT_RS33630 -1.0 -1.0 chromate transporter compare
BPHYT_RS34745 -1.0 -0.6 hypothetical protein compare
BPHYT_RS28870 -1.0 -0.8 MarR family transcriptional regulator compare
BPHYT_RS12820 -1.0 -2.8 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS11980 -1.0 -1.5 LysR family transcriptional regulator compare
BPHYT_RS10765 -1.0 -1.3 amidase compare
BPHYT_RS20695 -1.0 -1.1 ribokinase compare
BPHYT_RS22855 -1.0 -1.5 aldehyde-activating protein compare
BPHYT_RS08965 -1.0 -1.9 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS15165 -1.0 -2.2 histidine ammonia-lyase compare
BPHYT_RS36600 -1.0 -1.6 lytic transglycosylase compare
BPHYT_RS03330 -1.0 -1.6 hypothetical protein compare
BPHYT_RS29100 -1.0 -0.6 ketosteroid isomerase compare
BPHYT_RS22530 -1.0 -0.9 N5,N10-methylene tetrahydromethanopterin reductase compare
BPHYT_RS24460 -1.0 -2.1 nucleoside hydrolase compare
BPHYT_RS06195 -1.0 -0.6 membrane protein compare
BPHYT_RS30995 -1.0 -0.3 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS34150 -1.0 -1.7 Asp/Glu/hydantoin racemase compare
BPHYT_RS36275 -1.0 -0.5 hypothetical protein compare
BPHYT_RS15810 -1.0 -1.7 citrate synthase compare
BPHYT_RS01950 -1.0 -2.6 phosphoheptose isomerase compare
BPHYT_RS01530 -1.0 -1.5 penicillin-binding protein 2 compare
BPHYT_RS06335 -1.0 -0.5 CopG family transcriptional regulator compare
BPHYT_RS19620 -1.0 -1.7 general secretion pathway protein GspH compare
BPHYT_RS34565 -1.0 -1.4 chemotaxis protein compare
BPHYT_RS02985 -1.0 -1.1 MaoC family dehydratase compare
BPHYT_RS04415 -1.0 -1.3 N-acylglucosamine 2-epimerase compare
BPHYT_RS19545 -1.0 -1.8 nuclear protein SET compare
BPHYT_RS17520 -1.0 -2.4 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS23460 -1.0 -0.4 AraC family transcriptional regulator compare
BPHYT_RS30010 -1.0 -0.6 cell division protein compare
BPHYT_RS26480 -1.0 -2.7 peptidase M1 compare
BPHYT_RS02575 -1.0 -5.4 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS17700 -1.0 -2.6 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (from data) compare
BPHYT_RS17760 -1.0 -3.1 ABC transporter permease compare
BPHYT_RS23075 -1.0 -1.4 GntR family transcriptional regulator compare
BPHYT_RS14680 -1.0 -2.6 peptidase C39 compare
BPHYT_RS33060 -1.0 -0.9 hypothetical protein compare
BPHYT_RS23600 -1.0 -1.2 hypothetical protein compare
BPHYT_RS05065 -1.0 -1.5 DNA mismatch repair protein MutS compare
BPHYT_RS08360 -1.0 -0.9 LysR family transcriptional regulator compare
BPHYT_RS25710 -1.0 -0.9 hypothetical protein compare
BPHYT_RS31560 -1.0 -2.8 hypothetical protein compare
BPHYT_RS24175 -1.0 -1.2 C4-dicarboxylate ABC transporter compare
BPHYT_RS27125 -1.0 -0.6 hypothetical protein compare
BPHYT_RS02815 -0.9 -2.0 methyltransferase compare
BPHYT_RS05440 -0.9 -1.7 hypothetical protein compare
BPHYT_RS23175 -0.9 -1.1 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase compare
BPHYT_RS09105 -0.9 -3.4 protein-L-isoaspartate O-methyltransferase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in nophagecontrol experiments