Experiment set39S367 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS11705		+4.1	2.9	hypothetical protein
BPHYT_RS14140		+3.6	6.6	phosphate transporter permease subunit PstC
BPHYT_RS19570		+3.2	26.6	sodium/hydrogen exchanger
BPHYT_RS19565		+3.2	16.6	gamma-glutamyl:cysteine ligase
BPHYT_RS09500		+2.9	17.5	glucose-6-phosphate isomerase
BPHYT_RS33820		+2.9	27.8	histidine kinase
BPHYT_RS16710		+2.8	1.3	LysR family transcriptional regulator
BPHYT_RS06530		+2.8	4.3	membrane protein
BPHYT_RS04965		+2.6	13.3	ATP-binding protein
BPHYT_RS14855		+2.5	1.1	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS14400		+2.5	5.7	anti-sigma factor
BPHYT_RS05575		+2.5	17.1	Fis family transcriptional regulator
BPHYT_RS18655		+2.4	7.0	3-oxoacyl-ACP synthase
BPHYT_RS06175		+2.4	5.6	LPS biosynthesis
BPHYT_RS02595		+2.4	3.4	sulfurtransferase
BPHYT_RS04945		+2.4	20.6	membrane protein
BPHYT_RS25935		+2.4	2.2	type III secretion protein
BPHYT_RS01455		+2.3	3.0	peptide deformylase
BPHYT_RS04950		+2.3	18.9	hypothetical protein
BPHYT_RS16675		+2.3	2.7	dihydroorotase
BPHYT_RS33920		+2.3	17.3	type II citrate synthase
BPHYT_RS16175		+2.2	1.8	hemolysin D
BPHYT_RS27890		+2.2	1.2	hypothetical protein
BPHYT_RS02865		+2.2	1.9	hypothetical protein
BPHYT_RS05560		+2.2	15.5	Fis family transcriptional regulator
BPHYT_RS02905		+2.2	19.4	RNA polymerase subunit sigma-54
BPHYT_RS12550		+2.2	1.5	GTP-binding protein HflX
BPHYT_RS22835		+2.2	2.9	flagellar motor protein MotA
BPHYT_RS21905		+2.2	1.8	IclR family transcriptional regulator
BPHYT_RS05590		+2.1	17.3	trehalose-6-phosphate synthase
BPHYT_RS08850		+2.1	0.9	transcriptional regulator
BPHYT_RS01435		+2.1	18.3	LysR family transcriptional regulator
BPHYT_RS05610		+2.1	13.4	DNA-cytosine methyltransferase
BPHYT_RS30750		+2.1	2.6	GntR family transcriptional regulator
BPHYT_RS12845		+2.0	16.4	ATPase
BPHYT_RS09330		+2.0	15.9	phytoene synthase
BPHYT_RS04940		+2.0	2.7	hypothetical protein
BPHYT_RS17035		+1.9	2.1	sugar kinase
BPHYT_RS09815		+1.9	1.8	malate synthase
BPHYT_RS04290		+1.9	0.9	glycosyl transferase family 2
BPHYT_RS06985		+1.9	12.9	fumarate hydratase
BPHYT_RS06075		+1.9	14.3	hypothetical protein
BPHYT_RS25770		+1.9	1.4	hypothetical protein
BPHYT_RS14395		+1.9	8.6	sugar dehydratase
BPHYT_RS17100		+1.8	6.2	RNA pyrophosphohydrolase
BPHYT_RS04370		+1.8	0.6	glycosyl transferase
BPHYT_RS05155		+1.8	9.5	acetyltransferase GCN5
BPHYT_RS04285		+1.8	0.8	rhamnosyltransferase
BPHYT_RS05615		+1.8	1.3	hypothetical protein
BPHYT_RS03725		+1.8	1.1	serine hydroxymethyltransferase
BPHYT_RS17640		+1.8	1.8	2-alkenal reductase
BPHYT_RS16390		+1.8	6.1	MarR family transcriptional regulator
BPHYT_RS09660		+1.7	8.4	trehalose-6-phosphate synthase
BPHYT_RS02540		+1.7	4.0	hypothetical protein
BPHYT_RS12725		+1.7	14.6	regulator
BPHYT_RS05025		+1.7	1.4	sugar ABC transporter substrate-binding protein
BPHYT_RS07840		+1.7	1.8	muconate cycloisomerase
BPHYT_RS12840		+1.7	4.4	pyruvate dehydrogenase
BPHYT_RS00920		+1.6	4.8	transposase
BPHYT_RS25575		+1.6	1.9	alpha/beta hydrolase
BPHYT_RS23910		+1.6	6.5	phosphoribosyl-dephospho-CoA transferase
BPHYT_RS28065		+1.6	1.5	hypothetical protein
BPHYT_RS14845		+1.6	0.9	cysteine synthase
BPHYT_RS34485		+1.6	2.5	diguanylate phosphodiesterase
BPHYT_RS31060		+1.6	1.5	capsular polysaccharide biosynthesis protein
BPHYT_RS27370		+1.5	2.5	CoA transferase
BPHYT_RS31615		+1.5	1.3	thiamine pyrophosphate protein
BPHYT_RS25080		+1.5	2.0	glycine/betaine ABC transporter substrate-binding protein
BPHYT_RS33515		+1.5	8.7	porin
BPHYT_RS25470		+1.5	0.9	alkylhydroperoxidase
BPHYT_RS16840		+1.5	3.0	transketolase
BPHYT_RS06195		+1.5	1.8	membrane protein
BPHYT_RS04430		+1.5	2.2	amino acid ABC transporter ATPase
BPHYT_RS26695		+1.5	2.5	cobalamin biosynthesis protein CbiG
BPHYT_RS12150		+1.5	10.5	PII uridylyl-transferase
BPHYT_RS21475		+1.5	1.6	hypothetical protein
BPHYT_RS18910		+1.5	0.8	FlgN
BPHYT_RS31515		+1.5	2.4	agmatinase
BPHYT_RS22870		+1.5	1.5	copper transporter
BPHYT_RS14145		+1.5	7.1	phosphate ABC transporter substrate-binding protein
BPHYT_RS02005		+1.4	2.2	diguanylate phosphodiesterase
BPHYT_RS13200		+1.4	2.6	molybdopterin binding oxidoreductase
BPHYT_RS10345		+1.4	1.6	flagellar motor protein MotB
BPHYT_RS16060		+1.4	3.1	ribonucleotide-diphosphate reductase subunit alpha
BPHYT_RS34035		+1.4	2.0	type II and III secretion system outermembrane protein, secretin
BPHYT_RS02860		+1.4	0.7	membrane protein
BPHYT_RS36275		+1.4	1.0	hypothetical protein
BPHYT_RS09585		+1.4	0.8	hypothetical protein
BPHYT_RS16065		+1.4	0.9	LacI family transcriptional regulator
BPHYT_RS06975		+1.3	1.3	glutamate racemase
BPHYT_RS15620		+1.3	3.4	peptidyl-prolyl cis-trans isomerase
BPHYT_RS12985		+1.3	1.3	amino acid acetyltransferase
BPHYT_RS13080		+1.3	2.2	hypothetical protein
BPHYT_RS30995		+1.3	0.6	glucose-1-phosphate thymidylyltransferase
BPHYT_RS07255		+1.3	1.2	4-oxalocrotonate decarboxylase
BPHYT_RS05670		+1.3	2.1	hypothetical protein
BPHYT_RS28670		+1.3	1.4	MFS transporter
BPHYT_RS20095		+1.3	1.3	transcriptional regulator
BPHYT_RS20060		+1.3	1.5	hypothetical protein
BPHYT_RS08945		+1.3	5.0	hypothetical protein
BPHYT_RS11555		+1.3	2.3	allantoinase
BPHYT_RS34185		+1.3	4.1	cold-shock protein
BPHYT_RS09390		+1.3	2.2	ABC transporter permease
BPHYT_RS33030		+1.3	1.5	hypothetical protein
BPHYT_RS08995		+1.3	0.9	hypothetical protein
BPHYT_RS36585		+1.3	2.5	hypothetical protein
BPHYT_RS31225		+1.3	1.7	D-alanyl-D-alanine dipeptidase
BPHYT_RS02435		+1.3	1.3	hypothetical protein
BPHYT_RS30645		+1.3	2.3	hypothetical protein
BPHYT_RS04890		+1.3	1.3	cobalamin biosynthesis protein CobD
BPHYT_RS17290		+1.2	9.1	porin
BPHYT_RS11815		+1.2	1.3	alcohol dehydrogenase
BPHYT_RS11405		+1.2	3.0	hypothetical protein
BPHYT_RS34495		+1.2	2.3	phenol degradation protein meta
BPHYT_RS33215		+1.2	2.0	glycosyltransferase
BPHYT_RS20055		+1.2	1.7	hypothetical protein
BPHYT_RS28350		+1.2	1.7	fatty acid desaturase
BPHYT_RS02525		+1.2	7.4	membrane protein
BPHYT_RS05320		+1.2	1.4	beta-lactamase
BPHYT_RS26685		+1.2	0.9	precorrin-8X methylmutase
BPHYT_RS12280		+1.2	1.3	RNA helicase
BPHYT_RS07055		+1.2	2.9	sulfotransferase
BPHYT_RS14135		+1.2	5.1	phosphate transporter permease subunit PtsA
BPHYT_RS15320		+1.2	1.7	hypothetical protein
BPHYT_RS26975		+1.2	1.3	L-lactate dehydrogenase, LldE subunit (from data)
BPHYT_RS06375		+1.2	2.6	ribonuclease
BPHYT_RS24135		+1.2	1.6	alpha-dehydro-beta-deoxy-D-glucarate aldolase
BPHYT_RS11005		+1.1	2.3	chromate transporter
BPHYT_RS25970		+1.1	0.7	urea amidolyase
BPHYT_RS23410		+1.1	2.6	hypothetical protein
BPHYT_RS07540		+1.1	0.9	hypothetical protein
BPHYT_RS08510		+1.1	1.3	acyl-CoA dehydrogenase
BPHYT_RS03460		+1.1	6.7	mammalian cell entry protein
BPHYT_RS20155		+1.1	1.0	hypothetical protein
BPHYT_RS28505		+1.1	0.9	5-deoxyglucuronate isomerase
BPHYT_RS13645		+1.1	9.0	threonine--tRNA ligase
BPHYT_RS11150		+1.1	0.9	LysR family transcriptional regulator
BPHYT_RS11895		+1.1	2.6	peroxiredoxin
BPHYT_RS17545		+1.1	4.3	cold-shock protein
BPHYT_RS10350		+1.1	2.3	hypothetical protein
BPHYT_RS36365		+1.1	1.1	hypothetical protein
BPHYT_RS09145		+1.1	7.1	poly-beta-hydroxybutyrate polymerase
BPHYT_RS10145		+1.1	2.8	Mn-containing catalase
BPHYT_RS25980		+1.1	0.9	urea carboxylase
BPHYT_RS15170		+1.1	3.3	family 2 glycosyl transferase
BPHYT_RS16345		+1.1	3.1	succinyl-CoA ligase [ADP-forming] subunit beta
BPHYT_RS09620		+1.1	1.1	aminodeoxychorismate lyase
BPHYT_RS26675		+1.1	1.7	precorrin-6Y C5,15-methyltransferase
BPHYT_RS24095		+1.1	2.2	membrane protein
BPHYT_RS02695		+1.1	4.8	photosynthetic protein synthase I
BPHYT_RS11535		+1.1	2.0	membrane protein
BPHYT_RS12590		+1.1	1.3	dual-specificity RNA methyltransferase RlmN
BPHYT_RS21055		+1.1	1.6	S-formylglutathione hydrolase
BPHYT_RS04315		+1.1	4.7	UDP-N-acetylglucosamine 2-epimerase
BPHYT_RS03090		+1.1	1.4	hypothetical protein
BPHYT_RS11960		+1.1	0.7	MarR family transcriptional regulator
BPHYT_RS16570		+1.1	1.1	glutathione S-transferase
BPHYT_RS16340		+1.1	3.8	succinyl-CoA synthetase subunit alpha
BPHYT_RS29365		+1.1	1.4	ATP-NAD kinase
BPHYT_RS15105		+1.1	2.6	FAD-dependent oxidoreductase
BPHYT_RS05585		+1.1	3.8	hypothetical protein
BPHYT_RS15200		+1.1	3.4	hypothetical protein
BPHYT_RS03450		+1.1	5.7	paraquat-inducible protein A
BPHYT_RS09640		+1.1	5.4	DNAase
BPHYT_RS17075		+1.1	2.8	ABC transporter permease
BPHYT_RS13935		+1.1	0.9	mannosyltransferase
BPHYT_RS20830		+1.0	1.7	electron transfer flavoprotein subunit beta
BPHYT_RS23955		+1.0	2.5	LysR family transcriptional regulator
BPHYT_RS31685		+1.0	1.5	D-isomer specific 2-hydroxyacid dehydrogenase
BPHYT_RS24250		+1.0	3.6	GCN5 family acetyltransferase
BPHYT_RS20880		+1.0	1.2	polyketide cyclase
BPHYT_RS15160		+1.0	4.5	hypothetical protein
BPHYT_RS22820		+1.0	2.0	hydrolase
BPHYT_RS06065		+1.0	5.4	cytochrome C
BPHYT_RS07900		+1.0	1.8	hypothetical protein
BPHYT_RS30085		+1.0	1.2	hypothetical protein
BPHYT_RS35550		+1.0	1.3	nitrile hydratase
BPHYT_RS33695		+1.0	1.1	molybdenum ABC transporter ATPase
BPHYT_RS31040		+1.0	1.5	sugar transporter
BPHYT_RS28360		+1.0	0.9	carboxymuconolactone decarboxylase
BPHYT_RS02640		+1.0	7.4	cytochrome C oxidase
BPHYT_RS31400		+1.0	1.3	methyl-accepting chemotaxis protein
BPHYT_RS08125		+1.0	7.0	ATPase
BPHYT_RS15145		+1.0	2.3	3-oxoacyl-ACP synthase
BPHYT_RS03465		+1.0	3.6	hypothetical protein
BPHYT_RS35215		+1.0	1.3	dehydrogenase
BPHYT_RS33170		+1.0	2.0	acetyltransferase
BPHYT_RS06435		+1.0	1.4	hypothetical protein
BPHYT_RS16815		+1.0	2.1	ureidoglycolate hydrolase
BPHYT_RS06610		+1.0	1.0	triosephosphate isomerase
BPHYT_RS01965		+1.0	1.2	tRNA-Ala
BPHYT_RS16290		+1.0	1.3	hypothetical protein
BPHYT_RS10315		+1.0	2.5	MFS transporter
BPHYT_RS08190		+1.0	1.6	type II secretion system protein
BPHYT_RS31675		+1.0	2.1	hypothetical protein
BPHYT_RS24270		+1.0	0.8	C4-dicarboxylate ABC transporter substrate-binding protein
BPHYT_RS02530		+1.0	3.5	hypothetical protein
BPHYT_RS35165		+1.0	1.5	peptidase
BPHYT_RS04340		+1.0	1.6	hypothetical protein
BPHYT_RS16210		+1.0	2.0	peptidase

Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments