Experiment set39S366 for Burkholderia phytofirmans PsJN

200 most important genes:

gene	name	fitness	t score	description
BPHYT_RS01485		-4.2	-1.2	histidine kinase
BPHYT_RS36220		-3.9	-1.1	hypothetical protein
BPHYT_RS15890		-3.6	-1.0	3-hydroxy-2-methylbutyryl-CoA dehydrogenase
BPHYT_RS08165		-3.4	-1.4	pilus assembly protein TadE
BPHYT_RS20440		-3.4	-1.0	IclR family transcriptional regulator
BPHYT_RS27085		-3.3	-1.4	alkylhydroperoxidase
BPHYT_RS08335		-3.3	-1.0	hypothetical protein
BPHYT_RS26465		-3.3	-1.0	metallophosphoesterase
BPHYT_RS10135		-2.9	-0.8	hypothetical protein
BPHYT_RS28790		-2.9	-1.4	membrane protein
BPHYT_RS07845		-2.8	-2.2	LysR family transcriptional regulator
BPHYT_RS10945		-2.8	-1.2	2-deoxy-D-gluconate 3-dehydrogenase
BPHYT_RS29920		-2.8	-0.8	hypothetical protein
BPHYT_RS26490		-2.7	-0.8	hypothetical protein
BPHYT_RS17095		-2.7	-3.3	proline--tRNA ligase
BPHYT_RS00690		-2.7	-0.8	transcriptional regulator
BPHYT_RS01240		-2.7	-1.5	hypothetical protein
BPHYT_RS36385		-2.7	-0.8	TetR family transcriptional regulator
BPHYT_RS10750		-2.6	-0.8	LysR family transcriptional regulator
BPHYT_RS22455		-2.6	-0.8	phosphonate ABC transporter substrate-binding protein
BPHYT_RS25870		-2.6	-0.7	type III secretion system ATPase
BPHYT_RS12535		-2.5	-0.7	membrane protein
BPHYT_RS13160		-2.4	-1.0	membrane protein
BPHYT_RS12925		-2.4	-0.7	exodeoxyribonuclease III
BPHYT_RS20060		-2.4	-1.0	hypothetical protein
BPHYT_RS25500		-2.3	-1.2	hypothetical protein
BPHYT_RS25970		-2.3	-0.7	urea amidolyase
BPHYT_RS14865		-2.3	-1.1	UDP-glucose 6-dehydrogenase
BPHYT_RS23480		-2.3	-2.2	hypothetical protein
BPHYT_RS25645		-2.2	-1.2	dehydrogenase
BPHYT_RS07595		-2.2	-1.3	membrane protein
BPHYT_RS03655		-2.2	-0.8	membrane protein
BPHYT_RS33765		-2.1	-0.6	membrane protein
BPHYT_RS30665		-2.1	-2.2	peroxidase
BPHYT_RS11635		-2.1	-0.6	RNA polymerase subunit sigma-24
BPHYT_RS22265		-2.1	-0.9	hypothetical protein
BPHYT_RS07690		-2.1	-1.6	AraC family transcriptional regulator
BPHYT_RS22810		-2.0	-1.4	biopolymer transporter ExbB
BPHYT_RS02180		-2.0	-1.4	hypothetical protein
BPHYT_RS10650		-2.0	-0.8	membrane protein
BPHYT_RS14060		-2.0	-1.0	peptidase M23
BPHYT_RS18835		-2.0	-1.1	flagellar biosynthesis protein FliR
BPHYT_RS26680		-2.0	-2.5	oxidoreductase
BPHYT_RS17520		-2.0	-2.7	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
BPHYT_RS29870		-2.0	-1.0	2-dehydropantoate 2-reductase
BPHYT_RS08235		-2.0	-0.6	nucleoprotein, Hfg, host factor I
BPHYT_RS14840		-1.9	-6.7	lytic transglycosylase
BPHYT_RS02285		-1.9	-4.0	cell division protein
BPHYT_RS02765		-1.9	-0.9	cytochrome BD oxidase subunit I
BPHYT_RS01170		-1.9	-1.2	hypothetical protein
BPHYT_RS35535		-1.9	-3.0	arsenic transporter
BPHYT_RS11745		-1.8	-0.7	(2Fe-2S)-binding protein
BPHYT_RS22910		-1.8	-0.5	hypothetical protein
BPHYT_RS08020		-1.8	-1.8	hypothetical protein
BPHYT_RS23600		-1.8	-1.1	hypothetical protein
BPHYT_RS27430		-1.8	-0.9	LysR family transcriptional regulator
BPHYT_RS01280		-1.8	-1.2	hypothetical protein
BPHYT_RS28110		-1.8	-1.1	hypothetical protein
BPHYT_RS04885		-1.8	-1.5	threonine-phosphate decarboxylase
BPHYT_RS05620		-1.8	-0.9	CsbD family protein
BPHYT_RS13605		-1.7	-0.7	tRNA-Pro
BPHYT_RS36360		-1.7	-1.9	hypothetical protein
BPHYT_RS28690		-1.7	-1.4	diguanylate phosphodiesterase
BPHYT_RS09000		-1.7	-0.7	competence protein ComE
BPHYT_RS27030		-1.7	-0.7	transcriptional regulator
BPHYT_RS19945		-1.7	-1.7	hypothetical protein
BPHYT_RS26880		-1.7	-1.2	ketosteroid isomerase
BPHYT_RS20235		-1.7	-4.0	iron ABC transporter
BPHYT_RS27175		-1.6	-0.8	DNA-binding protein
BPHYT_RS25875		-1.6	-0.7	type III secretion protein
BPHYT_RS31260		-1.6	-0.9	histidine kinase
BPHYT_RS12500		-1.6	-2.0	hypothetical protein
BPHYT_RS28360		-1.6	-0.9	carboxymuconolactone decarboxylase
BPHYT_RS28485		-1.6	-0.5	GntR family transcriptional regulator
BPHYT_RS08355		-1.6	-0.8	hypothetical protein
BPHYT_RS35300		-1.6	-2.0	flavin reductase
BPHYT_RS26355		-1.6	-0.9	hypothetical protein
BPHYT_RS12615		-1.6	-0.4	dihydrodipicolinate synthase
BPHYT_RS20000		-1.6	-1.6	serine/threonine protein kinase
BPHYT_RS10645		-1.6	-0.6	cyanate hydratase
BPHYT_RS25020		-1.6	-1.3	phospholipid-binding protein
BPHYT_RS16555		-1.6	-2.3	cation transporter
BPHYT_RS05705		-1.5	-0.8	hypothetical protein
BPHYT_RS18610		-1.5	-2.7	lytic transglycosylase
BPHYT_RS32815		-1.5	-2.0	sugar ABC transporter
BPHYT_RS28140		-1.5	-1.5	translation initiation factor SUI1
BPHYT_RS10095		-1.5	-1.0	integrase
BPHYT_RS25780		-1.5	-0.4	DeoR faimly transcriptional regulator
BPHYT_RS21620		-1.5	-0.9	GCN5 family acetyltransferase
BPHYT_RS34155		-1.5	-1.0	3-hydroxybutyryl-CoA dehydrogenase
BPHYT_RS18630		-1.5	-2.0	allophanate hydrolase
BPHYT_RS08150		-1.5	-0.6	membrane protein
BPHYT_RS14550		-1.5	-0.6	tRNA-Asn
BPHYT_RS12510		-1.5	-1.0	RNA-binding protein
BPHYT_RS11125		-1.5	-0.7	alkylhydroperoxidase
BPHYT_RS09905		-1.4	-0.6	hypothetical protein
BPHYT_RS17525		-1.4	-0.9	glutaredoxin
BPHYT_RS31840		-1.4	-1.6	anhydrase
BPHYT_RS20845		-1.4	-0.9	peroxidase
BPHYT_RS05920		-1.4	-3.0	rod shape-determining protein RodA
BPHYT_RS20245		-1.4	-2.0	iron ABC transporter substrate-binding protein
BPHYT_RS29380		-1.4	-1.3	hypothetical protein
BPHYT_RS11825		-1.4	-0.6	cytosine deaminase
BPHYT_RS02570		-1.4	-5.3	phosphocarrier protein HPr
BPHYT_RS09980		-1.4	-0.7	TetR family transcriptional regulator
BPHYT_RS04955		-1.4	-1.6	methionyl-tRNA synthetase
BPHYT_RS04490		-1.4	-2.3	hypothetical protein
BPHYT_RS31700		-1.4	-2.2	porin
BPHYT_RS00740		-1.4	-2.4	hypothetical protein
BPHYT_RS36525		-1.4	-0.9	hypothetical protein
BPHYT_RS31600		-1.4	-1.6	hypothetical protein
BPHYT_RS13285		-1.4	-1.9	amino acid ABC transporter ATP-binding protein
BPHYT_RS00725		-1.4	-2.0	hypothetical protein
BPHYT_RS09895		-1.4	-0.8	LysR family transcriptional regulator
BPHYT_RS23445		-1.4	-1.0	hexuronate transporter
BPHYT_RS21590		-1.3	-1.7	NmrA family transcriptional regulator
BPHYT_RS02415		-1.3	-2.5	cytochrome C550
BPHYT_RS18660		-1.3	-1.2	hypothetical protein
BPHYT_RS26375		-1.3	-0.8	ATPase AAA
BPHYT_RS04830		-1.3	-2.3	hypothetical protein
BPHYT_RS01625		-1.3	-1.3	chemotaxis protein CheY
BPHYT_RS29520		-1.3	-0.5	hypothetical protein
BPHYT_RS25005		-1.3	-1.4	FMN reductase
BPHYT_RS31125		-1.3	-1.7	hypothetical protein
BPHYT_RS26305		-1.3	-1.1	exonuclease
BPHYT_RS21940		-1.3	-1.1	hemolysin D
BPHYT_RS11265		-1.3	-0.8	hypothetical protein
BPHYT_RS26815		-1.3	-1.7	1-aminocyclopropane-1-carboxylate deaminase
BPHYT_RS32395		-1.3	-0.5	hypothetical protein
BPHYT_RS33690		-1.3	-1.2	molybdate ABC transporter permease
BPHYT_RS28300		-1.3	-0.5	histone nucleoid-structuring protein H-NS
BPHYT_RS25370		-1.3	-0.8	acyl-CoA dehydrogenase
BPHYT_RS20790		-1.3	-0.5	TetR family transcriptional regulator
BPHYT_RS14245		-1.3	-0.5	membrane protein
BPHYT_RS22945		-1.3	-2.1	pilus assembly protein TadE
BPHYT_RS00325		-1.2	-1.2	hypothetical protein
BPHYT_RS02150		-1.2	-2.2	biotin synthase
BPHYT_RS07325		-1.2	-0.3	GntR family transcriptional regulator
BPHYT_RS29020		-1.2	-1.2	hypothetical protein
BPHYT_RS29750		-1.2	-1.2	phosphoenolpyruvate phosphomutase
BPHYT_RS28625		-1.2	-1.4	major facilitator transporter
BPHYT_RS09655		-1.2	-2.8	mechanosensitive ion channel protein MscS
BPHYT_RS02930		-1.2	-0.9	KpsF/GutQ family protein
BPHYT_RS31910		-1.2	-0.7	hypothetical protein
BPHYT_RS05065		-1.2	-1.6	DNA mismatch repair protein MutS
BPHYT_RS10570		-1.2	-1.1	LysR family transcriptional regulator
BPHYT_RS25230		-1.2	-2.0	formyltetrahydrofolate deformylase
BPHYT_RS02135		-1.2	-1.2	glyoxylate reductase
BPHYT_RS03410		-1.2	-0.9	queuine tRNA-ribosyltransferase
BPHYT_RS31680		-1.2	-2.5	dehydrogenase
BPHYT_RS23275		-1.2	-1.2	3-methylcrotonyl-CoA carboxylase subunit alpha
BPHYT_RS07705		-1.2	-1.3	arginine succinyltransferase
BPHYT_RS28680		-1.2	-1.3	porin
BPHYT_RS08545		-1.2	-0.8	oxidoreductase
BPHYT_RS26325		-1.2	-1.7	ATPase
BPHYT_RS27890		-1.2	-0.3	hypothetical protein
BPHYT_RS34655		-1.2	-0.7	2-amino-3-ketobutyrate CoA ligase
BPHYT_RS21530		-1.2	-0.9	RNA polymerase subunit sigma-24
BPHYT_RS34080		-1.2	-1.4	flagellar motor protein MotB
BPHYT_RS11930		-1.2	-0.7	3-hydroxybutyrate dehydrogenase
BPHYT_RS26750		-1.2	-0.9	aldolase
BPHYT_RS21495		-1.2	-0.7	ABC transporter
BPHYT_RS00205		-1.2	-1.9	DeoR family transcriptional regulator
BPHYT_RS24060		-1.2	-1.5	FAD-linked oxidase
BPHYT_RS32335		-1.1	-1.2	AsnC family transcriptional regulator
BPHYT_RS35090		-1.1	-2.1	diaminopimelate decarboxylase
BPHYT_RS22360		-1.1	-0.8	response regulator receiver
BPHYT_RS30945		-1.1	-1.8	LacI family transcriptional regulator
BPHYT_RS10125		-1.1	-0.8	hypothetical protein
BPHYT_RS30775		-1.1	-1.0	gluconate 2-dehydrogenase
BPHYT_RS26740		-1.1	-0.7	hypothetical protein
BPHYT_RS30825		-1.1	-1.3	extradiol dioxygenase
BPHYT_RS04060		-1.1	-2.4	glycosyl transferase
BPHYT_RS23520		-1.1	-0.7	peroxidase
BPHYT_RS11020		-1.1	-1.3	transporter
BPHYT_RS04990		-1.1	-1.2	hypothetical protein
BPHYT_RS07475		-1.1	-0.7	nitrate reductase
BPHYT_RS17620		-1.1	-5.6	cytochrome C
BPHYT_RS28685		-1.1	-1.3	GntR family transcriptional regulator
BPHYT_RS22530		-1.1	-0.9	N5,N10-methylene tetrahydromethanopterin reductase
BPHYT_RS10005		-1.1	-0.6	hypothetical protein
BPHYT_RS09230		-1.1	-2.0	NADPH:quinone reductase
BPHYT_RS12265		-1.1	-0.7	alanine acetyltransferase
BPHYT_RS13935		-1.1	-0.7	mannosyltransferase
BPHYT_RS22500		-1.1	-1.3	transcriptional regulator
BPHYT_RS21440		-1.1	-2.9	sugar ABC transporter permease
BPHYT_RS27995		-1.1	-1.0	hypothetical protein
BPHYT_RS25845		-1.1	-0.5	RND transporter MFP subunit
BPHYT_RS26965		-1.1	-0.8	L-lactate dehydrogenase, LldG subunit (from data)
BPHYT_RS15915		-1.1	-5.6	ornithine carbamoyltransferase
BPHYT_RS11335		-1.1	-1.4	hypothetical protein
BPHYT_RS22840		-1.1	-1.3	motility protein B
BPHYT_RS24945		-1.1	-2.1	alkylhydroperoxidase
BPHYT_RS06950		-1.1	-1.8	LysR family transcriptional regulator
BPHYT_RS32750		-1.0	-0.7	lipoprotein
BPHYT_RS29485		-1.0	-1.0	phosphonate ABC transporter ATP-binding protein
BPHYT_RS06775		-1.0	-1.5	nucleotide-binding protein
BPHYT_RS33155		-1.0	-1.2	hypothetical protein
BPHYT_RS08615		-1.0	-1.0	hypothetical protein
BPHYT_RS26540		-1.0	-0.8	hypothetical protein

Specific Phenotypes

For 2 genes in this experiment