Experiment set39S366 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS11705		+3.7	2.8	hypothetical protein
BPHYT_RS14140		+3.4	6.1	phosphate transporter permease subunit PstC
BPHYT_RS19570		+3.1	23.2	sodium/hydrogen exchanger
BPHYT_RS19565		+3.1	16.4	gamma-glutamyl:cysteine ligase
BPHYT_RS16065		+3.0	2.7	LacI family transcriptional regulator
BPHYT_RS09500		+3.0	12.9	glucose-6-phosphate isomerase
BPHYT_RS33820		+2.9	27.8	histidine kinase
BPHYT_RS06530		+2.8	4.1	membrane protein
BPHYT_RS04965		+2.7	16.8	ATP-binding protein
BPHYT_RS25935		+2.6	1.7	type III secretion protein
BPHYT_RS05575		+2.5	19.9	Fis family transcriptional regulator
BPHYT_RS06175		+2.5	4.2	LPS biosynthesis
BPHYT_RS04945		+2.4	21.1	membrane protein
BPHYT_RS02595		+2.4	3.3	sulfurtransferase
BPHYT_RS14855		+2.4	1.0	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS01455		+2.4	3.0	peptide deformylase
BPHYT_RS18655		+2.3	10.0	3-oxoacyl-ACP synthase
BPHYT_RS04950		+2.3	18.2	hypothetical protein
BPHYT_RS12900		+2.3	2.7	transposase
BPHYT_RS05590		+2.2	16.7	trehalose-6-phosphate synthase
BPHYT_RS05560		+2.2	9.6	Fis family transcriptional regulator
BPHYT_RS06075		+2.2	14.4	hypothetical protein
BPHYT_RS02905		+2.2	19.2	RNA polymerase subunit sigma-54
BPHYT_RS33920		+2.1	15.0	type II citrate synthase
BPHYT_RS12845		+2.1	16.3	ATPase
BPHYT_RS09330		+2.1	17.6	phytoene synthase
BPHYT_RS16710		+2.1	0.9	LysR family transcriptional regulator
BPHYT_RS08850		+2.0	0.8	transcriptional regulator
BPHYT_RS09815		+2.0	2.1	malate synthase
BPHYT_RS26025		+2.0	1.3	hypothetical protein
BPHYT_RS02865		+2.0	1.5	hypothetical protein
BPHYT_RS01435		+1.9	17.4	LysR family transcriptional regulator
BPHYT_RS14400		+1.9	3.9	anti-sigma factor
BPHYT_RS23910		+1.9	4.5	phosphoribosyl-dephospho-CoA transferase
BPHYT_RS16175		+1.9	1.3	hemolysin D
BPHYT_RS08415		+1.8	2.1	hypothetical protein
BPHYT_RS21340		+1.8	3.0	2OG-Fe(II) oxygenase
BPHYT_RS05155		+1.8	10.3	acetyltransferase GCN5
BPHYT_RS04290		+1.8	0.9	glycosyl transferase family 2
BPHYT_RS16675		+1.8	1.6	dihydroorotase
BPHYT_RS16335		+1.8	4.9	membrane protein
BPHYT_RS05610		+1.7	11.3	DNA-cytosine methyltransferase
BPHYT_RS04940		+1.7	2.7	hypothetical protein
BPHYT_RS00815		+1.7	2.0	hypothetical protein
BPHYT_RS09660		+1.7	8.3	trehalose-6-phosphate synthase
BPHYT_RS02435		+1.7	3.4	hypothetical protein
BPHYT_RS04285		+1.7	0.7	rhamnosyltransferase
BPHYT_RS14145		+1.7	7.8	phosphate ABC transporter substrate-binding protein
BPHYT_RS12725		+1.7	12.9	regulator
BPHYT_RS17240		+1.7	0.8	cell division protein FtsW
BPHYT_RS14395		+1.7	6.1	sugar dehydratase
BPHYT_RS07840		+1.7	1.9	muconate cycloisomerase
BPHYT_RS06985		+1.6	6.6	fumarate hydratase
BPHYT_RS30995		+1.6	0.7	glucose-1-phosphate thymidylyltransferase
BPHYT_RS26390		+1.6	1.6	antibiotic resistance protein
BPHYT_RS17035		+1.6	1.6	sugar kinase
BPHYT_RS32260		+1.6	1.5	hypothetical protein
BPHYT_RS16390		+1.6	5.4	MarR family transcriptional regulator
BPHYT_RS28670		+1.6	1.8	MFS transporter
BPHYT_RS05615		+1.6	1.1	hypothetical protein
BPHYT_RS22835		+1.5	1.8	flagellar motor protein MotA
BPHYT_RS07255		+1.5	1.7	4-oxalocrotonate decarboxylase
BPHYT_RS31615		+1.5	1.4	thiamine pyrophosphate protein
BPHYT_RS12840		+1.5	4.0	pyruvate dehydrogenase
BPHYT_RS25095		+1.5	2.2	AraC family transcriptional regulator
BPHYT_RS08945		+1.5	8.7	hypothetical protein
BPHYT_RS09650		+1.5	1.4	hypothetical protein
BPHYT_RS05025		+1.4	1.9	sugar ABC transporter substrate-binding protein
BPHYT_RS14845		+1.4	0.8	cysteine synthase
BPHYT_RS09445		+1.4	3.6	trigger factor
BPHYT_RS02540		+1.4	3.1	hypothetical protein
BPHYT_RS34035		+1.4	3.1	type II and III secretion system outermembrane protein, secretin
BPHYT_RS28470		+1.4	1.3	hypothetical protein
BPHYT_RS02525		+1.3	7.5	membrane protein
BPHYT_RS16290		+1.3	2.0	hypothetical protein
BPHYT_RS33515		+1.3	7.1	porin
BPHYT_RS22860		+1.3	1.6	chemotaxis protein CheY
BPHYT_RS12150		+1.3	8.9	PII uridylyl-transferase
BPHYT_RS30865		+1.3	2.7	sugar ABC transporter ATP-binding protein
BPHYT_RS17640		+1.3	0.9	2-alkenal reductase
BPHYT_RS21475		+1.3	1.4	hypothetical protein
BPHYT_RS15620		+1.3	3.5	peptidyl-prolyl cis-trans isomerase
BPHYT_RS03460		+1.3	7.2	mammalian cell entry protein
BPHYT_RS08510		+1.3	2.0	acyl-CoA dehydrogenase
BPHYT_RS32495		+1.3	2.8	ABC transporter
BPHYT_RS30085		+1.3	1.6	hypothetical protein
BPHYT_RS32200		+1.3	1.9	lytic transglycosylase
BPHYT_RS28215		+1.3	2.7	D-ribose transporter ATP binding protein
BPHYT_RS13200		+1.3	2.4	molybdopterin binding oxidoreductase
BPHYT_RS20630		+1.3	2.6	patatin
BPHYT_RS33390		+1.3	2.2	phosphate ABC transporter substrate-binding protein
BPHYT_RS03725		+1.3	0.6	serine hydroxymethyltransferase
BPHYT_RS34920		+1.3	1.1	IclR family transcriptional regulator
BPHYT_RS01960		+1.3	3.4	cytochrome C
BPHYT_RS16840		+1.3	2.6	transketolase
BPHYT_RS14195		+1.3	1.3	carbamoyl phosphate synthase small subunit
BPHYT_RS31225		+1.3	2.1	D-alanyl-D-alanine dipeptidase
BPHYT_RS11535		+1.3	1.9	membrane protein
BPHYT_RS16060		+1.3	1.8	ribonucleotide-diphosphate reductase subunit alpha
BPHYT_RS23540		+1.2	3.1	RND transporter
BPHYT_RS05670		+1.2	2.1	hypothetical protein
BPHYT_RS02860		+1.2	0.6	membrane protein
BPHYT_RS10400		+1.2	1.1	taurine ABC transporter permease
BPHYT_RS06195		+1.2	1.4	membrane protein
BPHYT_RS01340		+1.2	1.4	ChrB domain-containing protein
BPHYT_RS20055		+1.2	0.9	hypothetical protein
BPHYT_RS02100		+1.2	2.5	AsnC family transcriptional regulator
BPHYT_RS31515		+1.2	1.7	agmatinase
BPHYT_RS34485		+1.2	1.8	diguanylate phosphodiesterase
BPHYT_RS17290		+1.2	7.9	porin
BPHYT_RS01985		+1.2	2.3	hypothetical protein
BPHYT_RS18255		+1.2	1.8	phenylacetate-CoA oxygenase subunit PaaB
BPHYT_RS03480		+1.2	3.7	ferritin
BPHYT_RS31040		+1.2	1.4	sugar transporter
BPHYT_RS23395		+1.2	1.3	glycosyl transferase
BPHYT_RS09860		+1.1	0.8	pilus assembly protein PilP
BPHYT_RS35255		+1.1	4.5	AraC family transcriptional regulator
BPHYT_RS29410		+1.1	2.5	HPr kinase
BPHYT_RS30450		+1.1	0.8	ABC transporter permease
BPHYT_RS03400		+1.1	0.5	ATP-dependent DNA helicase RecG
BPHYT_RS16570		+1.1	1.2	glutathione S-transferase
BPHYT_RS05585		+1.1	4.2	hypothetical protein
BPHYT_RS09480		+1.1	0.5	peptidyl-prolyl cis-trans isomerase
BPHYT_RS11815		+1.1	1.3	alcohol dehydrogenase
BPHYT_RS23460		+1.1	0.8	AraC family transcriptional regulator
BPHYT_RS16340		+1.1	4.1	succinyl-CoA synthetase subunit alpha
BPHYT_RS33695		+1.1	1.4	molybdenum ABC transporter ATPase
BPHYT_RS14135		+1.1	4.6	phosphate transporter permease subunit PtsA
BPHYT_RS04095		+1.1	1.1	SAM-dependent methyltransferase PhcB
BPHYT_RS15200		+1.1	2.9	hypothetical protein
BPHYT_RS28945		+1.1	2.0	endo-1,4-D-glucanase
BPHYT_RS08525		+1.1	0.8	SAM-dependent methyltransferase
BPHYT_RS03780		+1.1	3.8	acyl-CoA dehydrogenase
BPHYT_RS24095		+1.1	2.9	membrane protein
BPHYT_RS28535		+1.1	1.1	response regulator receiver
BPHYT_RS09610		+1.1	3.3	hypothetical protein
BPHYT_RS34185		+1.1	4.1	cold-shock protein
BPHYT_RS26930		+1.1	6.0	mechanosensitive ion channel protein
BPHYT_RS08060		+1.1	4.1	ribosome maturation factor RimP
BPHYT_RS33175		+1.1	1.3	hypothetical protein
BPHYT_RS06320		+1.1	0.5	chemotaxis protein CheY
BPHYT_RS15180		+1.1	4.3	membrane protein
BPHYT_RS18590		+1.1	0.7	hypothetical protein
BPHYT_RS12635		+1.1	1.9	translation factor Sua5
BPHYT_RS16345		+1.1	3.1	succinyl-CoA ligase [ADP-forming] subunit beta
BPHYT_RS13645		+1.1	8.6	threonine--tRNA ligase
BPHYT_RS18910		+1.1	1.3	FlgN
BPHYT_RS02650		+1.1	2.5	membrane protein
BPHYT_RS34815		+1.0	1.2	ABC transporter
BPHYT_RS04970		+1.0	2.8	superoxide dismutase
BPHYT_RS34495		+1.0	2.1	phenol degradation protein meta
BPHYT_RS15865		+1.0	1.2	exodeoxyribonuclease VII large subunit
BPHYT_RS15175		+1.0	5.2	AMP-dependent synthetase
BPHYT_RS36275		+1.0	0.7	hypothetical protein
BPHYT_RS03995		+1.0	1.4	protein tyrosine kinase
BPHYT_RS11790		+1.0	3.8	fumarylacetoacetase
BPHYT_RS18265		+1.0	3.5	phenylacetate-CoA oxygenase subunit PaaJ
BPHYT_RS34275		+1.0	3.2	peptide chain release factor 3
BPHYT_RS33400		+1.0	1.9	magnesium transporter CorA
BPHYT_RS09145		+1.0	6.3	poly-beta-hydroxybutyrate polymerase
BPHYT_RS14485		+1.0	2.5	ribonuclease E
BPHYT_RS15155		+1.0	3.0	hypothetical protein
BPHYT_RS20380		+1.0	1.9	LysR family transcriptional regulator
BPHYT_RS02640		+1.0	7.1	cytochrome C oxidase
BPHYT_RS31755		+1.0	3.3	amino acid ABC transporter ATPase
BPHYT_RS06065		+1.0	5.1	cytochrome C
BPHYT_RS24630		+1.0	1.2	(2Fe-2S)-binding protein
BPHYT_RS21910		+1.0	1.7	ABC transporter permease
BPHYT_RS27370		+1.0	1.5	CoA transferase
BPHYT_RS06070		+1.0	6.2	cytochrome C
BPHYT_RS14895		+1.0	1.2	3-phosphoshikimate 1-carboxyvinyltransferase
BPHYT_RS07490		+1.0	2.0	aldehyde dehydrogenase
BPHYT_RS02530		+1.0	3.2	hypothetical protein
BPHYT_RS10250		+1.0	2.6	inosine-5-monophosphate dehydrogenase
BPHYT_RS14130		+1.0	2.3	phosphate ABC transporter ATP-binding protein
BPHYT_RS04315		+1.0	4.1	UDP-N-acetylglucosamine 2-epimerase
BPHYT_RS35550		+1.0	1.2	nitrile hydratase
BPHYT_RS05320		+1.0	1.1	beta-lactamase
BPHYT_RS23455		+1.0	0.9	phosphorylase
BPHYT_RS35480		+1.0	1.1	salicylyl-CoA 5-hydroxylase
BPHYT_RS04365		+1.0	6.0	membrane protein
BPHYT_RS24135		+1.0	1.4	alpha-dehydro-beta-deoxy-D-glucarate aldolase
BPHYT_RS12520		+1.0	2.2	nicotinate phosphoribosyltransferase
BPHYT_RS25250		+1.0	2.0	porin
BPHYT_RS17530		+1.0	2.9	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BPHYT_RS17920		+1.0	1.3	protein CyaY
BPHYT_RS33850		+0.9	0.6	sporulation protein
BPHYT_RS09640		+0.9	4.4	DNAase
BPHYT_RS25080		+0.9	0.5	glycine/betaine ABC transporter substrate-binding protein
BPHYT_RS07925		+0.9	1.9	glutamine amidotransferase
BPHYT_RS30485		+0.9	1.1	ABC transporter ATP-binding protein
BPHYT_RS12290		+0.9	1.5	universal stress protein UspA
BPHYT_RS15415		+0.9	5.7	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
BPHYT_RS26555		+0.9	1.4	multidrug MFS transporter
BPHYT_RS08395		+0.9	2.3	DSBA oxidoreductase
BPHYT_RS10470		+0.9	1.6	hypothetical protein
BPHYT_RS02685		+0.9	3.9	cytochrome C oxidase subunit I
BPHYT_RS02760		+0.9	0.6	cytochrome BD oxidase subunit II
BPHYT_RS09315		+0.9	0.3	chemotaxis protein CheY
BPHYT_RS23860		+0.9	1.1	malonic semialdehyde reductase

Specific Phenotypes

For 2 genes in this experiment