Experiment set39S358 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO10 MOI 10

200 most important genes:

  gene name fitness t score description  
BPHYT_RS17095 -5.9 -4.1 proline--tRNA ligase compare
BPHYT_RS36525 -4.3 -1.3 hypothetical protein compare
BPHYT_RS01975 -4.3 -1.3 hypothetical protein compare
BPHYT_RS06410 -4.2 -2.2 transcriptional regulator compare
BPHYT_RS35530 -4.0 -2.1 arsenate reductase compare
BPHYT_RS08165 -3.2 -1.4 pilus assembly protein TadE compare
BPHYT_RS30040 -3.2 -1.0 hypothetical protein compare
BPHYT_RS08335 -3.2 -1.0 hypothetical protein compare
BPHYT_RS24590 -3.2 -1.0 DeoR faimly transcriptional regulator compare
BPHYT_RS04320 -3.1 -10.7 hypothetical protein compare
BPHYT_RS06335 -3.1 -1.0 CopG family transcriptional regulator compare
BPHYT_RS36360 -3.1 -2.3 hypothetical protein compare
BPHYT_RS13605 -3.1 -1.0 tRNA-Pro compare
BPHYT_RS30490 -3.0 -0.9 2-haloalkanoic acid dehalogenase compare
BPHYT_RS23600 -3.0 -2.2 hypothetical protein compare
BPHYT_RS33185 -3.0 -5.1 methyltransferase type 11 compare
BPHYT_RS13450 -2.9 -1.3 GntR family transcriptional regulator compare
BPHYT_RS04365 -2.8 -7.7 membrane protein compare
BPHYT_RS26750 -2.8 -1.3 aldolase compare
BPHYT_RS10135 -2.8 -0.9 hypothetical protein compare
BPHYT_RS07705 -2.8 -2.6 arginine succinyltransferase compare
BPHYT_RS29015 -2.8 -1.2 RND transporter compare
BPHYT_RS00980 -2.8 -0.9 GCN5 family acetyltransferase compare
BPHYT_RS28680 -2.7 -1.6 porin compare
BPHYT_RS29920 -2.7 -0.8 hypothetical protein compare
BPHYT_RS01485 -2.7 -1.2 histidine kinase compare
BPHYT_RS11680 -2.6 -1.2 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS05635 -2.6 -7.8 hypothetical protein compare
BPHYT_RS32395 -2.6 -0.8 hypothetical protein compare
BPHYT_RS03645 -2.6 -1.9 tRNA dimethylallyltransferase compare
BPHYT_RS10095 -2.5 -1.3 integrase compare
BPHYT_RS26305 -2.4 -1.7 exonuclease compare
BPHYT_RS08385 -2.4 -1.0 secretion protein compare
BPHYT_RS20185 -2.4 -0.9 sugar transferase compare
BPHYT_RS36365 -2.4 -1.0 hypothetical protein compare
BPHYT_RS23315 -2.4 -1.0 hypothetical protein compare
BPHYT_RS27495 -2.4 -0.7 hypothetical protein compare
BPHYT_RS36385 -2.3 -0.7 TetR family transcriptional regulator compare
BPHYT_RS18590 -2.3 -0.7 hypothetical protein compare
BPHYT_RS23100 -2.3 -1.6 sugar ABC transporter substrate-binding protein compare
BPHYT_RS26575 -2.3 -1.3 hypothetical protein compare
BPHYT_RS02570 -2.2 -7.6 phosphocarrier protein HPr compare
BPHYT_RS18910 -2.2 -1.2 FlgN compare
BPHYT_RS25180 -2.2 -1.9 serine hydroxymethyltransferase compare
BPHYT_RS33690 -2.2 -1.6 molybdate ABC transporter permease compare
BPHYT_RS31840 -2.1 -1.6 anhydrase compare
BPHYT_RS05285 -2.1 -0.9 hypothetical protein compare
BPHYT_RS12465 -2.1 -1.2 inositol monophosphatase compare
BPHYT_RS06550 -2.1 -1.4 acetolactate synthase compare
BPHYT_RS21950 -2.1 -1.2 RND transporter compare
BPHYT_RS03410 -2.1 -1.5 queuine tRNA-ribosyltransferase compare
BPHYT_RS00815 -2.1 -0.9 hypothetical protein compare
BPHYT_RS33765 -2.1 -0.6 membrane protein compare
BPHYT_RS29380 -2.0 -1.5 hypothetical protein compare
BPHYT_RS21350 -2.0 -1.2 ADP-glucose pyrophosphorylase compare
BPHYT_RS21330 -2.0 -1.2 hypothetical protein compare
BPHYT_RS35835 -2.0 -1.0 hypothetical protein compare
BPHYT_RS23525 -2.0 -0.9 hypothetical protein compare
BPHYT_RS25335 -2.0 -0.6 hypothetical protein compare
BPHYT_RS30290 -1.9 -1.3 MFS transporter compare
BPHYT_RS16990 -1.9 -4.6 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BPHYT_RS06950 -1.9 -2.8 LysR family transcriptional regulator compare
BPHYT_RS32055 -1.9 -1.6 hypothetical protein compare
BPHYT_RS25815 -1.9 -1.1 deoxyribose-phosphate aldolase compare
BPHYT_RS29840 -1.9 -0.8 polysaccharide biosynthesis protein compare
BPHYT_RS20440 -1.9 -0.8 IclR family transcriptional regulator compare
BPHYT_RS30285 -1.9 -1.5 succinate-semialdehyde dehydrogenase compare
BPHYT_RS08235 -1.8 -0.6 nucleoprotein, Hfg, host factor I compare
BPHYT_RS30800 -1.8 -1.0 MFS transporter compare
BPHYT_RS02365 -1.8 -1.1 hypothetical protein compare
BPHYT_RS24315 -1.8 -1.0 phosphoribosyltransferase compare
BPHYT_RS14060 -1.8 -1.0 peptidase M23 compare
BPHYT_RS31260 -1.8 -1.0 histidine kinase compare
BPHYT_RS19985 -1.8 -0.8 CoA-transferase compare
BPHYT_RS36185 -1.8 -1.7 hypothetical protein compare
BPHYT_RS20235 -1.8 -3.3 iron ABC transporter compare
BPHYT_RS26525 -1.8 -0.8 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS02765 -1.8 -1.0 cytochrome BD oxidase subunit I compare
BPHYT_RS22135 -1.8 -1.1 3-ketoacyl-ACP reductase compare
BPHYT_RS35100 -1.8 -1.5 ABC transporter substrate-binding protein compare
BPHYT_RS23035 -1.8 -1.6 hypothetical protein compare
BPHYT_RS07475 -1.8 -0.9 nitrate reductase compare
BPHYT_RS10240 -1.8 -0.8 translation initiation inhibitor compare
BPHYT_RS21685 -1.8 -1.5 cobalamin biosynthesis protein CobS compare
BPHYT_RS30130 -1.8 -2.4 AraC family transcriptional regulator compare
BPHYT_RS04860 -1.7 -2.9 ABC transporter ATP-binding protein compare
BPHYT_RS29245 -1.7 -2.0 peptidase M23 compare
BPHYT_RS07760 -1.7 -0.8 diguanylate phosphodiesterase compare
BPHYT_RS23395 -1.7 -1.1 glycosyl transferase compare
BPHYT_RS04955 -1.7 -1.9 methionyl-tRNA synthetase compare
BPHYT_RS03280 -1.7 -0.8 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS05620 -1.7 -0.9 CsbD family protein compare
BPHYT_RS11970 -1.7 -0.9 cupin compare
BPHYT_RS22910 -1.7 -0.5 hypothetical protein compare
BPHYT_RS20220 -1.7 -1.0 antibiotic synthesis protein MbtH compare
BPHYT_RS09355 -1.7 -1.2 LysR family transcriptional regulator compare
BPHYT_RS33580 -1.7 -2.1 geranyltranstransferase compare
BPHYT_RS18760 -1.7 -1.2 flagellar biosynthesis protein FliT compare
BPHYT_RS35005 -1.6 -3.7 molecular chaperone DnaJ compare
BPHYT_RS03375 -1.6 -1.0 NAD(P) transhydrogenase compare
BPHYT_RS02575 -1.6 -7.0 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS20245 -1.6 -3.0 iron ABC transporter substrate-binding protein compare
BPHYT_RS10300 -1.6 -2.1 racemase compare
BPHYT_RS16985 -1.6 -4.7 esterase compare
BPHYT_RS31415 -1.6 -1.0 amino acid ABC transporter permease compare
BPHYT_RS33615 -1.6 -1.6 decarboxylase compare
BPHYT_RS08545 -1.6 -1.0 oxidoreductase compare
BPHYT_RS24500 -1.6 -0.6 histidine kinase compare
BPHYT_RS30775 -1.6 -1.2 gluconate 2-dehydrogenase compare
BPHYT_RS19435 -1.6 -2.6 16S rRNA methyltransferase compare
BPHYT_RS27060 -1.6 -1.1 photosystem reaction center subunit H compare
BPHYT_RS09000 -1.6 -0.7 competence protein ComE compare
BPHYT_RS29290 -1.6 -3.2 D-amino acid oxidase compare
BPHYT_RS19610 -1.6 -0.9 general secretion pathway protein GspC compare
BPHYT_RS05825 -1.6 -1.3 hypothetical protein compare
BPHYT_RS21170 -1.5 -1.3 LysR family transcriptional regulator compare
BPHYT_RS26990 -1.5 -2.4 GntR family transcriptional regulator compare
BPHYT_RS22260 -1.5 -1.0 hypothetical protein compare
BPHYT_RS12225 -1.5 -1.8 carnitine dehydratase compare
BPHYT_RS12615 -1.5 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS23990 -1.5 -0.8 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS27030 -1.5 -0.7 transcriptional regulator compare
BPHYT_RS06320 -1.5 -0.6 chemotaxis protein CheY compare
BPHYT_RS31255 -1.5 -0.8 cytochrome B561 compare
BPHYT_RS05315 -1.5 -3.0 hydrolase compare
BPHYT_RS35205 -1.5 -1.6 hypothetical protein compare
BPHYT_RS07860 -1.5 -1.5 benzoate 1,2-dioxygenase subunit beta compare
BPHYT_RS26880 -1.5 -1.1 ketosteroid isomerase compare
BPHYT_RS09880 -1.5 -1.5 MFS transporter compare
BPHYT_RS28245 -1.4 -1.1 MFS transporter compare
BPHYT_RS14755 -1.4 -1.4 tRNA (guanine-N(1)-)-methyltransferase compare
BPHYT_RS17830 -1.4 -1.6 histidine kinase compare
BPHYT_RS33180 -1.4 -3.2 hypothetical protein compare
BPHYT_RS18630 -1.4 -1.4 allophanate hydrolase compare
BPHYT_RS04445 -1.4 -3.6 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS21485 -1.4 -0.7 hypothetical protein compare
BPHYT_RS08410 -1.4 -0.6 dehydrogenase compare
BPHYT_RS33360 -1.4 -1.3 formyl-CoA transferase compare
BPHYT_RS01095 -1.4 -0.8 hypothetical protein compare
BPHYT_RS28605 -1.4 -1.2 NADPH-dependent FMN reductase compare
BPHYT_RS22885 -1.4 -1.7 hypothetical protein compare
BPHYT_RS02130 -1.4 -0.9 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS14660 -1.4 -1.4 hypothetical protein compare
BPHYT_RS09655 -1.4 -3.0 mechanosensitive ion channel protein MscS compare
BPHYT_RS13320 -1.4 -0.7 allantoate amidohydrolase compare
BPHYT_RS25500 -1.4 -0.9 hypothetical protein compare
BPHYT_RS25780 -1.4 -0.4 DeoR faimly transcriptional regulator compare
BPHYT_RS24175 -1.4 -1.4 C4-dicarboxylate ABC transporter compare
BPHYT_RS01950 -1.3 -2.0 phosphoheptose isomerase compare
BPHYT_RS09135 -1.3 -3.7 ribosomal large subunit pseudouridine synthase D compare
BPHYT_RS21625 -1.3 -0.6 LysR family transcriptional regulator compare
BPHYT_RS15890 -1.3 -0.7 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS12855 -1.3 -1.0 hypothetical protein compare
BPHYT_RS16555 -1.3 -2.3 cation transporter compare
BPHYT_RS34490 -1.3 -0.6 hypothetical protein compare
BPHYT_RS34780 -1.3 -2.0 phytoene synthase compare
BPHYT_RS08150 -1.3 -0.6 membrane protein compare
BPHYT_RS14945 -1.3 -1.4 phosphoglycolate phosphatase compare
BPHYT_RS07540 -1.3 -0.6 hypothetical protein compare
BPHYT_RS07090 -1.3 -1.0 hypothetical protein compare
BPHYT_RS28480 -1.3 -1.1 hydroxyglutarate oxidase compare
BPHYT_RS17050 -1.3 -1.3 hypothetical protein compare
BPHYT_RS03135 -1.3 -5.9 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
BPHYT_RS04010 -1.3 -0.6 glycosyl transferase compare
BPHYT_RS19920 -1.3 -0.9 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS11825 -1.3 -0.5 cytosine deaminase compare
BPHYT_RS09980 -1.3 -0.7 TetR family transcriptional regulator compare
BPHYT_RS34305 -1.3 -1.6 succinate-semialdehyde dehydrogenase compare
BPHYT_RS33130 -1.3 -1.8 transcriptional regulator compare
BPHYT_RS09155 -1.3 -3.2 3-ketoacyl-ACP reductase compare
BPHYT_RS32815 -1.3 -1.6 sugar ABC transporter compare
BPHYT_RS11980 -1.3 -1.6 LysR family transcriptional regulator compare
BPHYT_RS08665 -1.3 -0.5 hypothetical protein compare
BPHYT_RS04630 -1.3 -1.7 amino acid ABC transporter permease compare
BPHYT_RS27160 -1.3 -0.8 hypothetical protein compare
BPHYT_RS21595 -1.3 -1.8 TetR family transcriptional regulator compare
BPHYT_RS33225 -1.2 -2.8 NAD-dependent epimerase/dehydratase compare
BPHYT_RS00855 -1.2 -1.1 hypothetical protein compare
BPHYT_RS33365 -1.2 -1.8 PAS sensor protein compare
BPHYT_RS02285 -1.2 -3.5 cell division protein compare
BPHYT_RS31650 -1.2 -0.9 FAD-binding protein compare
BPHYT_RS08765 -1.2 -0.6 ABC transporter ATP-binding protein compare
BPHYT_RS36485 -1.2 -2.3 hypothetical protein compare
BPHYT_RS27860 -1.2 -0.9 membrane protein compare
BPHYT_RS31905 -1.2 -1.0 hypothetical protein compare
BPHYT_RS10895 -1.2 -1.6 transcriptional regulator compare
BPHYT_RS17525 -1.2 -1.1 glutaredoxin compare
BPHYT_RS30890 -1.2 -1.0 hypothetical protein compare
BPHYT_RS07870 -1.2 -1.4 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
BPHYT_RS27170 -1.2 -2.4 hypothetical protein compare
BPHYT_RS13000 -1.2 -2.1 phosphodiesterase compare
BPHYT_RS10305 -1.2 -0.8 hypothetical protein compare
BPHYT_RS16320 -1.2 -2.8 cyclic pyranopterin monophosphate synthase accessory protein compare
BPHYT_RS12295 -1.2 -1.2 LysR family transcriptional regulator compare
BPHYT_RS06415 -1.2 -1.4 uracil phosphoribosyltransferase compare
BPHYT_RS10040 -1.2 -0.7 hypothetical protein compare
BPHYT_RS30650 -1.2 -1.9 hypothetical protein compare
BPHYT_RS26955 -1.2 -0.8 succinylglutamate desuccinylase compare
BPHYT_RS28000 -1.2 -1.0 permease compare
BPHYT_RS15285 -1.2 -1.5 transcription elongation factor GreB compare


Specific Phenotypes

For 5 genes in this experiment