Experiment set39S355 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO4 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS21385 -4.2 -1.2 short-chain dehydrogenase compare
BPHYT_RS01485 -4.1 -1.2 histidine kinase compare
BPHYT_RS32750 -3.9 -1.1 lipoprotein compare
BPHYT_RS05620 -3.9 -1.1 CsbD family protein compare
BPHYT_RS27430 -3.8 -1.1 LysR family transcriptional regulator compare
BPHYT_RS13160 -3.8 -1.1 membrane protein compare
BPHYT_RS08020 -3.8 -1.8 hypothetical protein compare
BPHYT_RS11400 -3.5 -1.6 hypothetical protein compare
BPHYT_RS14735 -3.4 -1.0 hypothetical protein compare
BPHYT_RS23090 -3.3 -1.3 histidine kinase compare
BPHYT_RS09000 -3.1 -0.9 competence protein ComE compare
BPHYT_RS13605 -3.0 -0.9 tRNA-Pro compare
BPHYT_RS00940 -2.8 -2.7 transposase compare
BPHYT_RS29520 -2.8 -0.8 hypothetical protein compare
BPHYT_RS08250 -2.5 -2.2 hypothetical protein compare
BPHYT_RS12510 -2.5 -1.2 RNA-binding protein compare
BPHYT_RS09860 -2.5 -0.7 pilus assembly protein PilP compare
BPHYT_RS25870 -2.5 -0.7 type III secretion system ATPase compare
BPHYT_RS09895 -2.5 -1.0 LysR family transcriptional regulator compare
BPHYT_RS36385 -2.4 -0.7 TetR family transcriptional regulator compare
BPHYT_RS23460 -2.4 -0.7 AraC family transcriptional regulator compare
BPHYT_RS11170 -2.4 -0.7 hypothetical protein compare
BPHYT_RS21905 -2.4 -0.7 IclR family transcriptional regulator compare
BPHYT_RS31255 -2.4 -1.0 cytochrome B561 compare
BPHYT_RS23650 -2.3 -0.7 hypothetical protein compare
BPHYT_RS07660 -2.3 -1.5 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS13470 -2.3 -0.6 arylsulfate sulfotransferase compare
BPHYT_RS36525 -2.2 -1.1 hypothetical protein compare
BPHYT_RS07095 -2.2 -1.3 LysR family transcriptional regulator compare
BPHYT_RS14865 -2.1 -1.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS11155 -2.1 -0.9 hypothetical protein compare
BPHYT_RS35835 -2.1 -1.8 hypothetical protein compare
BPHYT_RS20130 -2.1 -1.5 diguanylate phosphodiesterase compare
BPHYT_RS35885 -2.0 -2.0 hypothetical protein compare
BPHYT_RS11635 -2.0 -0.6 RNA polymerase subunit sigma-24 compare
BPHYT_RS03410 -2.0 -1.3 queuine tRNA-ribosyltransferase compare
BPHYT_RS11125 -2.0 -0.8 alkylhydroperoxidase compare
BPHYT_RS07400 -2.0 -1.4 hypothetical protein compare
BPHYT_RS28305 -2.0 -0.8 protein tyrosine phosphatase compare
BPHYT_RS28110 -2.0 -1.1 hypothetical protein compare
BPHYT_RS10985 -2.0 -2.0 MFS transporter compare
BPHYT_RS23525 -2.0 -0.8 hypothetical protein compare
BPHYT_RS28790 -2.0 -1.3 membrane protein compare
BPHYT_RS25335 -2.0 -0.6 hypothetical protein compare
BPHYT_RS31545 -1.9 -2.1 membrane protein compare
BPHYT_RS02180 -1.9 -1.3 hypothetical protein compare
BPHYT_RS27330 -1.9 -0.7 hypothetical protein compare
BPHYT_RS30315 -1.9 -2.4 LysR family transcriptional regulator compare
BPHYT_RS30040 -1.9 -0.8 hypothetical protein compare
BPHYT_RS19620 -1.9 -2.6 general secretion pathway protein GspH compare
BPHYT_RS08235 -1.9 -0.5 nucleoprotein, Hfg, host factor I compare
BPHYT_RS17095 -1.9 -2.3 proline--tRNA ligase compare
BPHYT_RS33360 -1.9 -1.3 formyl-CoA transferase compare
BPHYT_RS24315 -1.9 -0.9 phosphoribosyltransferase compare
BPHYT_RS10120 -1.9 -1.5 membrane protein compare
BPHYT_RS22835 -1.8 -0.7 flagellar motor protein MotA compare
BPHYT_RS29945 -1.8 -1.0 histidine kinase compare
BPHYT_RS13395 -1.8 -1.1 endoribonuclease L-PSP compare
BPHYT_RS19660 -1.8 -1.0 hypothetical protein compare
BPHYT_RS24655 -1.8 -1.1 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS22750 -1.8 -1.6 Flagellar brake protein YcgR 2 compare
BPHYT_RS11745 -1.8 -0.7 (2Fe-2S)-binding protein compare
BPHYT_RS20235 -1.8 -4.0 iron ABC transporter compare
BPHYT_RS08965 -1.7 -3.1 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS10240 -1.7 -0.7 translation initiation inhibitor compare
BPHYT_RS31950 -1.7 -1.6 short-chain dehydrogenase compare
BPHYT_RS23170 -1.7 -1.4 XRE family transcriptional regulator compare
BPHYT_RS17890 -1.7 -0.8 shikimate kinase compare
BPHYT_RS22910 -1.7 -0.5 hypothetical protein compare
BPHYT_RS10185 -1.7 -1.4 MarR family transcriptional regulator compare
BPHYT_RS11235 -1.7 -0.7 hypothetical protein compare
BPHYT_RS10040 -1.7 -0.8 hypothetical protein compare
BPHYT_RS23880 -1.7 -0.8 sugar ABC transporter permease compare
BPHYT_RS06470 -1.6 -0.9 membrane protein compare
BPHYT_RS24285 -1.6 -1.1 TetR family transcriptional regulator compare
BPHYT_RS23940 -1.6 -0.6 GntR family transcriptional regulator compare
BPHYT_RS27155 -1.6 -0.8 peroxiredoxin compare
BPHYT_RS29915 -1.6 -1.6 GntR family transcriptional regulator compare
BPHYT_RS33655 -1.6 -1.9 MarR family transcriptional regulator compare
BPHYT_RS19610 -1.6 -0.9 general secretion pathway protein GspC compare
BPHYT_RS06950 -1.6 -2.2 LysR family transcriptional regulator compare
BPHYT_RS35655 -1.6 -1.5 hypothetical protein compare
BPHYT_RS35090 -1.6 -2.6 diaminopimelate decarboxylase compare
BPHYT_RS29745 -1.5 -1.2 phosphonopyruvate decarboxylase compare
BPHYT_RS34400 -1.5 -1.3 hypothetical protein compare
BPHYT_RS06410 -1.5 -1.5 transcriptional regulator compare
BPHYT_RS25875 -1.5 -0.6 type III secretion protein compare
BPHYT_RS02365 -1.5 -1.0 hypothetical protein compare
BPHYT_RS10175 -1.5 -1.2 membrane protein compare
BPHYT_RS12615 -1.5 -0.4 dihydrodipicolinate synthase compare
BPHYT_RS12900 -1.5 -0.7 transposase compare
BPHYT_RS09655 -1.5 -2.9 mechanosensitive ion channel protein MscS compare
BPHYT_RS02570 -1.5 -4.6 phosphocarrier protein HPr compare
BPHYT_RS33630 -1.5 -1.3 chromate transporter compare
BPHYT_RS27175 -1.5 -0.7 DNA-binding protein compare
BPHYT_RS23855 -1.5 -2.1 hypothetical protein compare
BPHYT_RS29695 -1.5 -1.0 hypothetical protein compare
BPHYT_RS35205 -1.5 -1.6 hypothetical protein compare
BPHYT_RS08165 -1.5 -1.0 pilus assembly protein TadE compare
BPHYT_RS10095 -1.5 -1.0 integrase compare
BPHYT_RS01240 -1.5 -1.3 hypothetical protein compare
BPHYT_RS16195 -1.5 -2.4 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS29810 -1.5 -0.7 hexapeptide transferase compare
BPHYT_RS32525 -1.5 -1.2 hypothetical protein compare
BPHYT_RS27920 -1.5 -0.6 tricarballylate utilization protein B compare
BPHYT_RS07320 -1.5 -0.7 dihydrodipicolinate synthetase compare
BPHYT_RS26750 -1.5 -1.0 aldolase compare
BPHYT_RS02755 -1.5 -1.0 cyd operon protein YbgT compare
BPHYT_RS07480 -1.5 -0.7 FAD-dependent oxidoreductase compare
BPHYT_RS33690 -1.4 -1.3 molybdate ABC transporter permease compare
BPHYT_RS21620 -1.4 -0.8 GCN5 family acetyltransferase compare
BPHYT_RS22300 -1.4 -1.0 hypothetical protein compare
BPHYT_RS06550 -1.4 -1.1 acetolactate synthase compare
BPHYT_RS09185 -1.4 -1.4 hypothetical protein compare
BPHYT_RS28350 -1.4 -1.0 fatty acid desaturase compare
BPHYT_RS28880 -1.4 -2.0 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase compare
BPHYT_RS03655 -1.4 -0.8 membrane protein compare
BPHYT_RS09465 -1.4 -0.9 transcriptional regulator compare
BPHYT_RS25780 -1.4 -0.4 DeoR faimly transcriptional regulator compare
BPHYT_RS32815 -1.4 -1.7 sugar ABC transporter compare
BPHYT_RS09755 -1.4 -0.8 glycosyl transferase family 1 compare
BPHYT_RS20590 -1.4 -1.6 methionine sulfoxide reductase A compare
BPHYT_RS30340 -1.4 -1.0 AraC family transcriptional regulator compare
BPHYT_RS12295 -1.4 -1.2 LysR family transcriptional regulator compare
BPHYT_RS22100 -1.4 -2.7 ribonuclease BN compare
BPHYT_RS20025 -1.4 -1.5 crotonase compare
BPHYT_RS14945 -1.4 -1.4 phosphoglycolate phosphatase compare
BPHYT_RS02300 -1.4 -0.8 acid shock protein compare
BPHYT_RS21590 -1.4 -1.7 NmrA family transcriptional regulator compare
BPHYT_RS22885 -1.4 -1.8 hypothetical protein compare
BPHYT_RS10125 -1.3 -0.8 hypothetical protein compare
BPHYT_RS02130 -1.3 -1.5 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS35405 -1.3 -1.4 hypothetical protein compare
BPHYT_RS22930 -1.3 -0.5 type II secretion system protein compare
BPHYT_RS36365 -1.3 -0.7 hypothetical protein compare
BPHYT_RS29135 -1.3 -3.3 acriflavin resistance protein compare
BPHYT_RS31760 -1.3 -2.5 aryldialkylphosphatase compare
BPHYT_RS30460 -1.3 -1.8 glycerate dehydrogenase compare
BPHYT_RS05440 -1.3 -1.7 hypothetical protein compare
BPHYT_RS36130 -1.3 -0.7 hypothetical protein compare
BPHYT_RS00980 -1.3 -0.5 GCN5 family acetyltransferase compare
BPHYT_RS20115 -1.3 -0.9 transcriptional regulator compare
BPHYT_RS09415 -1.3 -2.3 carboxylesterase compare
BPHYT_RS13185 -1.3 -2.0 2,4-dienoyl-CoA reductase compare
BPHYT_RS07605 -1.3 -1.5 hypothetical protein compare
BPHYT_RS14840 -1.3 -4.1 lytic transglycosylase compare
BPHYT_RS31815 -1.3 -2.1 hypothetical protein compare
BPHYT_RS27125 -1.3 -0.7 hypothetical protein compare
BPHYT_RS31560 -1.3 -2.5 hypothetical protein compare
BPHYT_RS00740 -1.3 -2.0 hypothetical protein compare
BPHYT_RS21685 -1.3 -1.4 cobalamin biosynthesis protein CobS compare
BPHYT_RS10165 -1.3 -0.5 transcriptional regulator compare
BPHYT_RS09100 -1.3 -4.4 stationary phase survival protein SurE compare
BPHYT_RS29085 -1.3 -0.8 LysR family transcriptional regulator compare
BPHYT_RS27800 -1.3 -1.2 esterase compare
BPHYT_RS17805 -1.2 -1.5 hypothetical protein compare
BPHYT_RS07860 -1.2 -1.2 benzoate 1,2-dioxygenase subunit beta compare
BPHYT_RS11310 -1.2 -0.9 LysR family transcriptional regulator compare
BPHYT_RS28025 -1.2 -0.8 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS22860 -1.2 -0.7 chemotaxis protein CheY compare
BPHYT_RS03570 -1.2 -3.2 heat-inducible transcription repressor HrcA compare
BPHYT_RS17800 -1.2 -1.9 hypothetical protein compare
BPHYT_RS26490 -1.2 -0.5 hypothetical protein compare
BPHYT_RS26660 -1.2 -1.5 precorrin-4 C11-methyltransferase compare
BPHYT_RS36035 -1.2 -0.9 hypothetical protein compare
BPHYT_RS34860 -1.2 -1.5 chemotaxis protein compare
BPHYT_RS18610 -1.2 -2.2 lytic transglycosylase compare
BPHYT_RS28245 -1.2 -0.9 MFS transporter compare
BPHYT_RS28830 -1.2 -0.5 LysR family transcriptional regulator compare
BPHYT_RS30890 -1.2 -0.9 hypothetical protein compare
BPHYT_RS27850 -1.2 -0.7 hemerythrin compare
BPHYT_RS02285 -1.2 -3.4 cell division protein compare
BPHYT_RS35735 -1.2 -1.1 nitroreductase compare
BPHYT_RS20475 -1.2 -1.0 hypothetical protein compare
BPHYT_RS28680 -1.2 -1.1 porin compare
BPHYT_RS03745 -1.2 -3.5 cleavage protein compare
BPHYT_RS04610 -1.2 -1.9 type VI secretion protein ImpA compare
BPHYT_RS00365 -1.2 -2.1 ABC transporter substrate-binding protein compare
BPHYT_RS23385 -1.2 -0.7 group 1 glycosyl transferase compare
BPHYT_RS24755 -1.2 -1.7 catalase compare
BPHYT_RS10680 -1.2 -1.1 LysR family transcriptional regulator compare
BPHYT_RS27910 -1.2 -2.8 aldolase compare
BPHYT_RS31630 -1.2 -1.9 hypothetical protein compare
BPHYT_RS15220 -1.2 -2.2 plasmid maintenance system antidote protein compare
BPHYT_RS32395 -1.2 -0.5 hypothetical protein compare
BPHYT_RS10650 -1.2 -0.6 membrane protein compare
BPHYT_RS08490 -1.1 -1.0 Crp/Fnr family transcriptional regulator compare
BPHYT_RS02575 -1.1 -5.7 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS03285 -1.1 -3.2 aminoglycoside phosphotransferase compare
BPHYT_RS36185 -1.1 -1.2 hypothetical protein compare
BPHYT_RS03235 -1.1 -0.9 enoyl-CoA hydratase compare
BPHYT_RS10390 -1.1 -1.9 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS06990 -1.1 -0.4 membrane protein compare
BPHYT_RS26815 -1.1 -1.3 1-aminocyclopropane-1-carboxylate deaminase compare
BPHYT_RS32675 -1.1 -0.8 2-methylcitrate dehydratase compare
BPHYT_RS09085 -1.1 -1.8 mannosyltransferase compare
BPHYT_RS31680 -1.1 -1.5 dehydrogenase compare
BPHYT_RS30530 -1.1 -2.6 ABC transporter substrate-binding protein compare
BPHYT_RS29990 -1.1 -3.1 hypothetical protein compare
BPHYT_RS19890 -1.1 -1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments