Experiment set39S355 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS11705		+4.1	3.0	hypothetical protein
BPHYT_RS14140		+3.7	6.2	phosphate transporter permease subunit PstC
BPHYT_RS19565		+3.3	18.0	gamma-glutamyl:cysteine ligase
BPHYT_RS19570		+3.2	26.1	sodium/hydrogen exchanger
BPHYT_RS33820		+2.9	28.0	histidine kinase
BPHYT_RS09500		+2.8	11.1	glucose-6-phosphate isomerase
BPHYT_RS06530		+2.6	2.8	membrane protein
BPHYT_RS14855		+2.5	1.0	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS18655		+2.5	13.1	3-oxoacyl-ACP synthase
BPHYT_RS04945		+2.5	21.0	membrane protein
BPHYT_RS05575		+2.4	19.0	Fis family transcriptional regulator
BPHYT_RS04950		+2.4	18.6	hypothetical protein
BPHYT_RS06175		+2.4	6.3	LPS biosynthesis
BPHYT_RS02595		+2.4	3.3	sulfurtransferase
BPHYT_RS03725		+2.3	1.7	serine hydroxymethyltransferase
BPHYT_RS04965		+2.3	15.2	ATP-binding protein
BPHYT_RS14400		+2.2	4.5	anti-sigma factor
BPHYT_RS01435		+2.2	19.8	LysR family transcriptional regulator
BPHYT_RS33920		+2.1	14.8	type II citrate synthase
BPHYT_RS02905		+2.1	18.7	RNA polymerase subunit sigma-54
BPHYT_RS25935		+2.1	1.7	type III secretion protein
BPHYT_RS04335		+2.1	1.7	membrane protein
BPHYT_RS08850		+2.1	0.9	transcriptional regulator
BPHYT_RS05590		+2.1	14.1	trehalose-6-phosphate synthase
BPHYT_RS23910		+2.0	4.7	phosphoribosyl-dephospho-CoA transferase
BPHYT_RS05610		+2.0	9.1	DNA-cytosine methyltransferase
BPHYT_RS05560		+2.0	8.5	Fis family transcriptional regulator
BPHYT_RS28620		+2.0	2.4	enoyl-CoA hydratase
BPHYT_RS09330		+2.0	18.6	phytoene synthase
BPHYT_RS16175		+2.0	1.4	hemolysin D
BPHYT_RS08995		+2.0	1.8	hypothetical protein
BPHYT_RS02860		+1.9	1.0	membrane protein
BPHYT_RS02865		+1.9	1.1	hypothetical protein
BPHYT_RS04290		+1.9	0.9	glycosyl transferase family 2
BPHYT_RS04940		+1.9	3.3	hypothetical protein
BPHYT_RS12845		+1.8	13.4	ATPase
BPHYT_RS04385		+1.8	4.0	nucleoside-diphosphate sugar oxidoreductase
BPHYT_RS06075		+1.8	12.7	hypothetical protein
BPHYT_RS01455		+1.8	2.0	peptide deformylase
BPHYT_RS04370		+1.8	0.5	glycosyl transferase
BPHYT_RS04285		+1.8	0.7	rhamnosyltransferase
BPHYT_RS16390		+1.8	6.2	MarR family transcriptional regulator
BPHYT_RS09815		+1.8	2.0	malate synthase
BPHYT_RS06610		+1.7	1.5	triosephosphate isomerase
BPHYT_RS05615		+1.7	1.2	hypothetical protein
BPHYT_RS14135		+1.7	5.8	phosphate transporter permease subunit PtsA
BPHYT_RS21475		+1.7	1.9	hypothetical protein
BPHYT_RS09480		+1.7	0.8	peptidyl-prolyl cis-trans isomerase
BPHYT_RS09660		+1.7	7.6	trehalose-6-phosphate synthase
BPHYT_RS03455		+1.6	2.7	paraquat-inducible protein A
BPHYT_RS31615		+1.6	1.6	thiamine pyrophosphate protein
BPHYT_RS33515		+1.6	11.1	porin
BPHYT_RS16345		+1.6	4.0	succinyl-CoA ligase [ADP-forming] subunit beta
BPHYT_RS26470		+1.6	1.4	MFS transporter
BPHYT_RS10005		+1.6	2.0	hypothetical protein
BPHYT_RS12725		+1.6	12.8	regulator
BPHYT_RS07840		+1.6	1.6	muconate cycloisomerase
BPHYT_RS17100		+1.6	6.9	RNA pyrophosphohydrolase
BPHYT_RS24095		+1.6	3.5	membrane protein
BPHYT_RS29850		+1.6	1.9	protein tyrosine kinase
BPHYT_RS14145		+1.5	7.1	phosphate ABC transporter substrate-binding protein
BPHYT_RS05320		+1.5	1.8	beta-lactamase
BPHYT_RS05025		+1.5	1.5	sugar ABC transporter substrate-binding protein
BPHYT_RS14845		+1.5	0.9	cysteine synthase
BPHYT_RS16060		+1.5	4.2	ribonucleotide-diphosphate reductase subunit alpha
BPHYT_RS30750		+1.5	1.2	GntR family transcriptional regulator
BPHYT_RS26300		+1.5	1.8	ATP-dependent DNA ligase
BPHYT_RS14395		+1.5	6.4	sugar dehydratase
BPHYT_RS28670		+1.5	1.6	MFS transporter
BPHYT_RS28595		+1.5	1.5	glyoxalase
BPHYT_RS23395		+1.5	0.8	glycosyl transferase
BPHYT_RS05155		+1.5	6.0	acetyltransferase GCN5
BPHYT_RS03090		+1.4	1.8	hypothetical protein
BPHYT_RS02005		+1.4	2.2	diguanylate phosphodiesterase
BPHYT_RS11815		+1.4	1.5	alcohol dehydrogenase
BPHYT_RS17640		+1.4	0.9	2-alkenal reductase
BPHYT_RS17035		+1.4	0.9	sugar kinase
BPHYT_RS06985		+1.4	8.1	fumarate hydratase
BPHYT_RS34485		+1.4	2.2	diguanylate phosphodiesterase
BPHYT_RS25095		+1.4	1.7	AraC family transcriptional regulator
BPHYT_RS05705		+1.4	1.4	hypothetical protein
BPHYT_RS14195		+1.4	2.2	carbamoyl phosphate synthase small subunit
BPHYT_RS22420		+1.3	2.3	membrane protein
BPHYT_RS06195		+1.3	1.6	membrane protein
BPHYT_RS18600		+1.3	2.1	glutathione S-transferase
BPHYT_RS28505		+1.3	1.7	5-deoxyglucuronate isomerase
BPHYT_RS04340		+1.3	2.7	hypothetical protein
BPHYT_RS26685		+1.3	1.1	precorrin-8X methylmutase
BPHYT_RS09445		+1.3	3.9	trigger factor
BPHYT_RS11040		+1.3	2.1	GntR family transcriptional regulator
BPHYT_RS08510		+1.3	1.5	acyl-CoA dehydrogenase
BPHYT_RS04315		+1.3	5.2	UDP-N-acetylglucosamine 2-epimerase
BPHYT_RS05905		+1.3	1.1	hypothetical protein
BPHYT_RS21910		+1.3	2.5	ABC transporter permease
BPHYT_RS21055		+1.2	1.6	S-formylglutathione hydrolase
BPHYT_RS33965		+1.2	1.9	methylcitrate synthase
BPHYT_RS05670		+1.2	1.8	hypothetical protein
BPHYT_RS26930		+1.2	5.6	mechanosensitive ion channel protein
BPHYT_RS12535		+1.2	0.8	membrane protein
BPHYT_RS33390		+1.2	1.8	phosphate ABC transporter substrate-binding protein
BPHYT_RS07255		+1.2	1.2	4-oxalocrotonate decarboxylase
BPHYT_RS21445		+1.2	2.2	sugar ABC transporter ATP-binding protein
BPHYT_RS34035		+1.2	1.6	type II and III secretion system outermembrane protein, secretin
BPHYT_RS13200		+1.2	2.2	molybdopterin binding oxidoreductase
BPHYT_RS16840		+1.2	2.3	transketolase
BPHYT_RS16290		+1.2	1.7	hypothetical protein
BPHYT_RS15620		+1.2	3.7	peptidyl-prolyl cis-trans isomerase
BPHYT_RS36000		+1.2	1.4	hypothetical protein
BPHYT_RS31130		+1.2	2.5	hypothetical protein
BPHYT_RS02650		+1.2	2.8	membrane protein
BPHYT_RS21925		+1.2	3.2	formimidoylglutamase
BPHYT_RS03450		+1.2	4.1	paraquat-inducible protein A
BPHYT_RS24630		+1.2	2.0	(2Fe-2S)-binding protein
BPHYT_RS23435		+1.2	2.3	MFS transporter
BPHYT_RS20885		+1.2	3.2	nuclear protein SET
BPHYT_RS34495		+1.2	2.1	phenol degradation protein meta
BPHYT_RS08945		+1.2	5.7	hypothetical protein
BPHYT_RS17290		+1.2	7.3	porin
BPHYT_RS26025		+1.2	0.6	hypothetical protein
BPHYT_RS09440		+1.2	1.7	glycerate kinase
BPHYT_RS25030		+1.2	1.5	gluconate 2-dehydrogenase
BPHYT_RS15145		+1.2	2.0	3-oxoacyl-ACP synthase
BPHYT_RS12280		+1.1	1.3	RNA helicase
BPHYT_RS07850		+1.1	1.7	catechol 1,2-dioxygenase
BPHYT_RS10400		+1.1	1.0	taurine ABC transporter permease
BPHYT_RS34185		+1.1	2.9	cold-shock protein
BPHYT_RS27345		+1.1	2.4	aldehyde dehydrogenase
BPHYT_RS03480		+1.1	3.5	ferritin
BPHYT_RS11965		+1.1	3.4	alkylhydroperoxidase
BPHYT_RS07190		+1.1	2.4	acetyltransferase
BPHYT_RS02525		+1.1	4.7	membrane protein
BPHYT_RS25370		+1.1	1.5	acyl-CoA dehydrogenase
BPHYT_RS07760		+1.1	0.8	diguanylate phosphodiesterase
BPHYT_RS35310		+1.1	1.4	GCN5 family N-acetyltransferase
BPHYT_RS21215		+1.1	3.1	Crp/Fnr family transcriptional regulator
BPHYT_RS12150		+1.1	8.1	PII uridylyl-transferase
BPHYT_RS10395		+1.1	0.9	sulfonate ABC transporter
BPHYT_RS29800		+1.1	1.5	hypothetical protein
BPHYT_RS15105		+1.1	2.7	FAD-dependent oxidoreductase
BPHYT_RS25210		+1.1	1.2	drug:proton antiporter
BPHYT_RS34025		+1.1	1.2	hypothetical protein
BPHYT_RS11955		+1.1	1.3	hemolysin D
BPHYT_RS16335		+1.1	2.5	membrane protein
BPHYT_RS10145		+1.1	2.2	Mn-containing catalase
BPHYT_RS27580		+1.1	1.8	F0F1 ATP synthase subunit alpha
BPHYT_RS20055		+1.1	0.9	hypothetical protein
BPHYT_RS09905		+1.1	0.8	hypothetical protein
BPHYT_RS09280		+1.1	0.7	pyridoxal-5'-phosphate-dependent protein subunit beta
BPHYT_RS02135		+1.1	1.7	glyoxylate reductase
BPHYT_RS30140		+1.1	0.6	3-methylitaconate isomerase
BPHYT_RS26895		+1.0	2.4	nicotinate phosphoribosyltransferase
BPHYT_RS28870		+1.0	1.4	MarR family transcriptional regulator
BPHYT_RS15135		+1.0	4.1	3-ketoacyl-ACP reductase
BPHYT_RS24135		+1.0	1.4	alpha-dehydro-beta-deoxy-D-glucarate aldolase
BPHYT_RS12990		+1.0	2.2	iron transporter
BPHYT_RS32150		+1.0	1.4	hypothetical protein
BPHYT_RS16570		+1.0	1.0	glutathione S-transferase
BPHYT_RS25970		+1.0	0.6	urea amidolyase
BPHYT_RS13765		+1.0	2.5	LysR family transcriptional regulator
BPHYT_RS23250		+1.0	0.8	hypothetical protein
BPHYT_RS15200		+1.0	4.3	hypothetical protein
BPHYT_RS36075		+1.0	2.6	hypothetical protein
BPHYT_RS33370		+1.0	1.1	LysR family transcriptional regulator
BPHYT_RS09145		+1.0	6.7	poly-beta-hydroxybutyrate polymerase
BPHYT_RS32690		+1.0	1.4	acyl-CoA dehydrogenase
BPHYT_RS02150		+1.0	1.6	biotin synthase
BPHYT_RS00960		+1.0	2.5	recombinase RecA
BPHYT_RS28740		+1.0	1.5	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
BPHYT_RS06070		+1.0	5.9	cytochrome C
BPHYT_RS11685		+1.0	0.7	phasin family protein
BPHYT_RS09640		+1.0	3.9	DNAase
BPHYT_RS04095		+1.0	1.0	SAM-dependent methyltransferase PhcB
BPHYT_RS07140		+1.0	1.3	hypothetical protein
BPHYT_RS31600		+1.0	1.8	hypothetical protein
BPHYT_RS06065		+1.0	4.7	cytochrome C
BPHYT_RS22060		+1.0	8.2	amino acid transporter
BPHYT_RS06375		+1.0	2.1	ribonuclease
BPHYT_RS32960		+1.0	1.7	short-chain dehydrogenase
BPHYT_RS35355		+1.0	3.0	amidohydrolase
BPHYT_RS07690		+1.0	1.5	AraC family transcriptional regulator
BPHYT_RS10830		+1.0	1.8	carbon monoxide dehydrogenase
BPHYT_RS27295		+1.0	1.5	hypothetical protein
BPHYT_RS10740		+1.0	0.8	LuxR family transcriptional regulator
BPHYT_RS35550		+1.0	1.1	nitrile hydratase
BPHYT_RS36470		+1.0	0.5	hypothetical protein
BPHYT_RS01620		+1.0	4.4	sensor histidine kinase
BPHYT_RS28000		+1.0	1.3	permease
BPHYT_RS15155		+1.0	3.0	hypothetical protein
BPHYT_RS04430		+1.0	1.2	amino acid ABC transporter ATPase
BPHYT_RS35230		+1.0	1.6	type 11 methyltransferase
BPHYT_RS08685		+0.9	1.8	hypothetical protein
BPHYT_RS33765		+0.9	0.5	membrane protein
BPHYT_RS13080		+0.9	1.4	hypothetical protein
BPHYT_RS15195		+0.9	5.4	glycerol acyltransferase
BPHYT_RS02640		+0.9	6.8	cytochrome C oxidase
BPHYT_RS32820		+0.9	2.1	xylose ABC transporter substrate-binding protein
BPHYT_RS02530		+0.9	3.5	hypothetical protein
BPHYT_RS16180		+0.9	0.5	TetR family transcriptional regulator
BPHYT_RS08335		+0.9	0.8	hypothetical protein
BPHYT_RS12185		+0.9	3.6	succinyldiaminopimelate aminotransferase

Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments