Experiment set39S354 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO4 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS26115 -4.3 -2.0 polysaccharide deacetylase compare
BPHYT_RS18660 -3.9 -1.9 hypothetical protein compare
BPHYT_RS04910 -3.8 -1.1 phenylacetic acid degradation protein compare
BPHYT_RS32750 -3.8 -1.1 lipoprotein compare
BPHYT_RS07320 -3.5 -1.0 dihydrodipicolinate synthetase compare
BPHYT_RS23445 -3.3 -1.5 hexuronate transporter compare
BPHYT_RS26570 -3.3 -0.9 5'-nucleotidase compare
BPHYT_RS26465 -3.1 -0.9 metallophosphoesterase compare
BPHYT_RS24590 -3.0 -0.8 DeoR faimly transcriptional regulator compare
BPHYT_RS27920 -2.8 -0.8 tricarballylate utilization protein B compare
BPHYT_RS07540 -2.7 -0.8 hypothetical protein compare
BPHYT_RS21625 -2.7 -0.8 LysR family transcriptional regulator compare
BPHYT_RS01975 -2.7 -1.0 hypothetical protein compare
BPHYT_RS09970 -2.6 -2.0 glutathione S-transferase compare
BPHYT_RS03235 -2.6 -1.9 enoyl-CoA hydratase compare
BPHYT_RS01485 -2.5 -1.0 histidine kinase compare
BPHYT_RS36000 -2.5 -1.5 hypothetical protein compare
BPHYT_RS13395 -2.5 -1.2 endoribonuclease L-PSP compare
BPHYT_RS28365 -2.5 -1.0 Germin subfamily 1 member 15 compare
BPHYT_RS18705 -2.4 -1.1 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS02130 -2.4 -1.6 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS34085 -2.4 -1.6 polyamine ABC transporter permease compare
BPHYT_RS10750 -2.4 -0.7 LysR family transcriptional regulator compare
BPHYT_RS08525 -2.4 -0.7 SAM-dependent methyltransferase compare
BPHYT_RS31050 -2.4 -0.7 epimerase compare
BPHYT_RS08385 -2.3 -0.9 secretion protein compare
BPHYT_RS26820 -2.3 -0.9 LysR family transcriptional regulator compare
BPHYT_RS12510 -2.3 -1.0 RNA-binding protein compare
BPHYT_RS03730 -2.3 -1.4 transcriptional repressor NrdR compare
BPHYT_RS20725 -2.3 -1.1 histidine kinase compare
BPHYT_RS17095 -2.2 -2.6 proline--tRNA ligase compare
BPHYT_RS21335 -2.2 -0.9 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS09465 -2.2 -1.0 transcriptional regulator compare
BPHYT_RS11765 -2.2 -0.6 polyamine ABC transporter permease compare
BPHYT_RS16555 -2.1 -2.1 cation transporter compare
BPHYT_RS06350 -2.1 -1.0 chemotaxis protein CheY compare
BPHYT_RS29100 -2.1 -0.8 ketosteroid isomerase compare
BPHYT_RS34235 -2.1 -1.1 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) compare
BPHYT_RS15565 -2.1 -1.6 membrane protein compare
BPHYT_RS28685 -2.1 -1.8 GntR family transcriptional regulator compare
BPHYT_RS14505 -2.1 -1.1 membrane protein compare
BPHYT_RS09655 -2.0 -3.3 mechanosensitive ion channel protein MscS compare
BPHYT_RS13320 -2.0 -0.8 allantoate amidohydrolase compare
BPHYT_RS06550 -2.0 -1.2 acetolactate synthase compare
BPHYT_RS07595 -2.0 -1.1 membrane protein compare
BPHYT_RS28600 -2.0 -0.9 ArsC family transcriptional regulator compare
BPHYT_RS21385 -2.0 -0.9 short-chain dehydrogenase compare
BPHYT_RS10305 -1.9 -0.9 hypothetical protein compare
BPHYT_RS09980 -1.9 -0.8 TetR family transcriptional regulator compare
BPHYT_RS23430 -1.9 -1.1 bifunctional D-altronate/D-mannonate dehydratase compare
BPHYT_RS28305 -1.9 -0.7 protein tyrosine phosphatase compare
BPHYT_RS31385 -1.9 -1.5 ketoacyl reductase compare
BPHYT_RS36365 -1.9 -0.7 hypothetical protein compare
BPHYT_RS05565 -1.9 -0.9 membrane protein compare
BPHYT_RS31290 -1.9 -1.2 histidine kinase compare
BPHYT_RS36130 -1.8 -0.7 hypothetical protein compare
BPHYT_RS36385 -1.8 -0.5 TetR family transcriptional regulator compare
BPHYT_RS29840 -1.8 -0.7 polysaccharide biosynthesis protein compare
BPHYT_RS03330 -1.8 -1.9 hypothetical protein compare
BPHYT_RS12820 -1.8 -4.8 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS33280 -1.8 -1.1 membrane protein compare
BPHYT_RS08235 -1.8 -0.5 nucleoprotein, Hfg, host factor I compare
BPHYT_RS32360 -1.8 -0.8 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS13130 -1.8 -0.8 metallophosphatase compare
BPHYT_RS05440 -1.7 -1.3 hypothetical protein compare
BPHYT_RS34655 -1.7 -0.9 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS27160 -1.7 -0.8 hypothetical protein compare
BPHYT_RS06710 -1.7 -0.7 hypothetical protein compare
BPHYT_RS05370 -1.7 -1.1 aldehyde dehydrogenase compare
BPHYT_RS08220 -1.7 -2.4 hypothetical protein compare
BPHYT_RS10540 -1.7 -0.7 secretion protein compare
BPHYT_RS12500 -1.7 -1.8 hypothetical protein compare
BPHYT_RS26025 -1.6 -0.4 hypothetical protein compare
BPHYT_RS03280 -1.6 -0.6 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS11970 -1.6 -0.8 cupin compare
BPHYT_RS10125 -1.6 -0.9 hypothetical protein compare
BPHYT_RS09545 -1.6 -1.0 peptide methionine sulfoxide reductase compare
BPHYT_RS14060 -1.6 -0.8 peptidase M23 compare
BPHYT_RS35675 -1.6 -1.4 short-chain dehydrogenase compare
BPHYT_RS31905 -1.6 -1.1 hypothetical protein compare
BPHYT_RS25220 -1.6 -1.5 ferredoxin oxidoreductase compare
BPHYT_RS02570 -1.6 -6.4 phosphocarrier protein HPr compare
BPHYT_RS11400 -1.6 -1.0 hypothetical protein compare
BPHYT_RS22255 -1.6 -1.4 hypothetical protein compare
BPHYT_RS29175 -1.6 -1.5 ABC transporter ATP-binding protein compare
BPHYT_RS16180 -1.6 -0.4 TetR family transcriptional regulator compare
BPHYT_RS33385 -1.6 -1.2 major facilitator superfamily protein compare
BPHYT_RS20545 -1.6 -0.8 hypothetical protein compare
BPHYT_RS22910 -1.6 -0.4 hypothetical protein compare
BPHYT_RS17520 -1.5 -2.1 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS30490 -1.5 -0.6 2-haloalkanoic acid dehalogenase compare
BPHYT_RS25295 -1.5 -0.8 cobalt transporter compare
BPHYT_RS29380 -1.5 -0.8 hypothetical protein compare
BPHYT_RS30825 -1.5 -1.3 extradiol dioxygenase compare
BPHYT_RS27060 -1.5 -1.0 photosystem reaction center subunit H compare
BPHYT_RS02760 -1.5 -0.6 cytochrome BD oxidase subunit II compare
BPHYT_RS31900 -1.5 -1.3 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS26880 -1.5 -1.0 ketosteroid isomerase compare
BPHYT_RS00885 -1.5 -1.5 chemotaxis protein CheY compare
BPHYT_RS29450 -1.5 -0.8 phosphonate metabolism protein compare
BPHYT_RS07400 -1.5 -1.1 hypothetical protein compare
BPHYT_RS25400 -1.5 -1.5 butyryl-CoA dehydrogenase compare
BPHYT_RS33035 -1.5 -2.0 murein transglycosylase compare
BPHYT_RS07845 -1.5 -1.7 LysR family transcriptional regulator compare
BPHYT_RS03110 -1.4 -1.4 MarR family transcriptional regulator compare
BPHYT_RS06950 -1.4 -2.1 LysR family transcriptional regulator compare
BPHYT_RS35315 -1.4 -0.9 threonyl-tRNA synthetase compare
BPHYT_RS06900 -1.4 -3.3 aspartate aminotransferase compare
BPHYT_RS12295 -1.4 -1.1 LysR family transcriptional regulator compare
BPHYT_RS02575 -1.4 -7.3 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS19905 -1.4 -0.9 membrane protein compare
BPHYT_RS35205 -1.4 -1.4 hypothetical protein compare
BPHYT_RS10575 -1.4 -2.0 hypothetical protein compare
BPHYT_RS03410 -1.4 -1.0 queuine tRNA-ribosyltransferase compare
BPHYT_RS06320 -1.4 -0.5 chemotaxis protein CheY compare
BPHYT_RS24630 -1.4 -0.9 (2Fe-2S)-binding protein compare
BPHYT_RS14670 -1.4 -0.6 hypothetical protein compare
BPHYT_RS31805 -1.4 -2.9 beta-lactamase compare
BPHYT_RS00540 -1.4 -2.4 hypothetical protein compare
BPHYT_RS07850 -1.4 -1.6 catechol 1,2-dioxygenase compare
BPHYT_RS26260 -1.4 -2.2 histidine kinase compare
BPHYT_RS01530 -1.3 -1.8 penicillin-binding protein 2 compare
BPHYT_RS35300 -1.3 -1.7 flavin reductase compare
BPHYT_RS09100 -1.3 -4.6 stationary phase survival protein SurE compare
BPHYT_RS32335 -1.3 -0.8 AsnC family transcriptional regulator compare
BPHYT_RS10850 -1.3 -0.9 LysR family transcriptional regulator compare
BPHYT_RS28110 -1.3 -0.9 hypothetical protein compare
BPHYT_RS29810 -1.3 -0.6 hexapeptide transferase compare
BPHYT_RS28135 -1.3 -1.9 alcohol dehydrogenase compare
BPHYT_RS11155 -1.3 -0.6 hypothetical protein compare
BPHYT_RS22750 -1.3 -1.4 Flagellar brake protein YcgR 2 compare
BPHYT_RS01205 -1.3 -1.1 hypothetical protein compare
BPHYT_RS07480 -1.3 -0.6 FAD-dependent oxidoreductase compare
BPHYT_RS09905 -1.3 -0.5 hypothetical protein compare
BPHYT_RS28790 -1.3 -0.9 membrane protein compare
BPHYT_RS14840 -1.3 -5.0 lytic transglycosylase compare
BPHYT_RS12900 -1.3 -0.6 transposase compare
BPHYT_RS08965 -1.3 -2.2 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS04955 -1.3 -1.4 methionyl-tRNA synthetase compare
BPHYT_RS33370 -1.3 -0.9 LysR family transcriptional regulator compare
BPHYT_RS09260 -1.3 -2.3 histidine kinase compare
BPHYT_RS35585 -1.3 -1.6 hypothetical protein compare
BPHYT_RS09070 -1.3 -2.7 recombination protein RecR compare
BPHYT_RS32785 -1.3 -1.8 membrane protein compare
BPHYT_RS03065 -1.3 -0.8 LuxR family transcriptional regulator compare
BPHYT_RS32345 -1.3 -2.6 LrgB family protein compare
BPHYT_RS07760 -1.3 -0.8 diguanylate phosphodiesterase compare
BPHYT_RS00205 -1.3 -1.9 DeoR family transcriptional regulator compare
BPHYT_RS20120 -1.3 -1.3 porin compare
BPHYT_RS02480 -1.3 -1.1 alkaline phosphatase compare
BPHYT_RS27445 -1.3 -1.7 hypothetical protein compare
BPHYT_RS26340 -1.2 -1.6 cupin compare
BPHYT_RS10095 -1.2 -0.8 integrase compare
BPHYT_RS02285 -1.2 -3.0 cell division protein compare
BPHYT_RS11125 -1.2 -0.6 alkylhydroperoxidase compare
BPHYT_RS33155 -1.2 -1.1 hypothetical protein compare
BPHYT_RS05290 -1.2 -0.5 hypothetical protein compare
BPHYT_RS20155 -1.2 -0.5 hypothetical protein compare
BPHYT_RS27925 -1.2 -1.7 tricarballylate dehydrogenase compare
BPHYT_RS07690 -1.2 -1.1 AraC family transcriptional regulator compare
BPHYT_RS08665 -1.2 -0.5 hypothetical protein compare
BPHYT_RS19620 -1.2 -1.7 general secretion pathway protein GspH compare
BPHYT_RS25515 -1.2 -0.8 glutathione S-transferase compare
BPHYT_RS26225 -1.2 -1.1 hypothetical protein compare
BPHYT_RS05435 -1.2 -3.2 ABC transporter substrate-binding protein compare
BPHYT_RS00635 -1.2 -2.5 acetyltransferase compare
BPHYT_RS29920 -1.2 -0.5 hypothetical protein compare
BPHYT_RS21070 -1.2 -1.3 ferredoxin compare
BPHYT_RS30610 -1.2 -1.1 major facilitator transporter compare
BPHYT_RS20000 -1.2 -1.2 serine/threonine protein kinase compare
BPHYT_RS17630 -1.2 -4.6 ubiquinol-cytochrome C reductase compare
BPHYT_RS28535 -1.2 -0.6 response regulator receiver compare
BPHYT_RS35535 -1.2 -1.7 arsenic transporter compare
BPHYT_RS18610 -1.2 -2.8 lytic transglycosylase compare
BPHYT_RS24755 -1.2 -1.4 catalase compare
BPHYT_RS20905 -1.2 -1.2 hypothetical protein compare
BPHYT_RS17430 -1.2 -3.0 thiol:disulfide interchange protein compare
BPHYT_RS22290 -1.2 -3.0 membrane protein compare
BPHYT_RS25885 -1.2 -0.8 type III secretion protein compare
BPHYT_RS31840 -1.2 -1.2 anhydrase compare
BPHYT_RS04255 -1.2 -1.3 diadenosine tetraphosphatase compare
BPHYT_RS00980 -1.2 -0.4 GCN5 family acetyltransferase compare
BPHYT_RS03570 -1.1 -2.2 heat-inducible transcription repressor HrcA compare
BPHYT_RS15090 -1.1 -2.9 xanthine dehydrogenase accessory protein XdhC compare
BPHYT_RS30530 -1.1 -2.8 ABC transporter substrate-binding protein compare
BPHYT_RS03685 -1.1 -1.4 Tol system periplasmic component YbgF compare
BPHYT_RS25500 -1.1 -0.7 hypothetical protein compare
BPHYT_RS20085 -1.1 -1.0 mannosyltransferase compare
BPHYT_RS27995 -1.1 -1.0 hypothetical protein compare
BPHYT_RS13735 -1.1 -1.5 membrane protein compare
BPHYT_RS33585 -1.1 -1.1 exodeoxyribonuclease VII small subunit compare
BPHYT_RS31950 -1.1 -1.1 short-chain dehydrogenase compare
BPHYT_RS20925 -1.1 -3.8 dimethylallyltransferase compare
BPHYT_RS31545 -1.1 -1.3 membrane protein compare
BPHYT_RS29655 -1.1 -1.1 polysaccharide deacetylase compare
BPHYT_RS03090 -1.1 -0.9 hypothetical protein compare
BPHYT_RS35090 -1.1 -2.3 diaminopimelate decarboxylase compare
BPHYT_RS21135 -1.1 -3.0 NADH-ubiquinone oxidoreductase subunit 6 compare
BPHYT_RS26660 -1.1 -1.1 precorrin-4 C11-methyltransferase compare
BPHYT_RS25815 -1.1 -0.8 deoxyribose-phosphate aldolase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments