Experiment set39S348 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO3 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS10475 -4.9 -1.4 mammalian cell entry protein compare
BPHYT_RS28305 -3.7 -1.0 protein tyrosine phosphatase compare
BPHYT_RS26525 -3.6 -1.0 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS26465 -3.4 -0.9 metallophosphoesterase compare
BPHYT_RS02985 -3.2 -2.1 MaoC family dehydratase compare
BPHYT_RS36385 -3.1 -0.8 TetR family transcriptional regulator compare
BPHYT_RS00980 -3.0 -0.8 GCN5 family acetyltransferase compare
BPHYT_RS01485 -2.9 -1.1 histidine kinase compare
BPHYT_RS26490 -2.9 -0.8 hypothetical protein compare
BPHYT_RS34810 -2.8 -2.1 RND transporter compare
BPHYT_RS24655 -2.8 -1.3 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS31050 -2.8 -0.8 epimerase compare
BPHYT_RS32210 -2.8 -1.1 hypothetical protein compare
BPHYT_RS33580 -2.7 -3.4 geranyltranstransferase compare
BPHYT_RS18760 -2.7 -1.6 flagellar biosynthesis protein FliT compare
BPHYT_RS09860 -2.7 -0.7 pilus assembly protein PilP compare
BPHYT_RS26820 -2.6 -1.0 LysR family transcriptional regulator compare
BPHYT_RS23315 -2.6 -1.0 hypothetical protein compare
BPHYT_RS27800 -2.6 -2.1 esterase compare
BPHYT_RS18590 -2.6 -0.7 hypothetical protein compare
BPHYT_RS27850 -2.6 -1.0 hemerythrin compare
BPHYT_RS29745 -2.6 -1.6 phosphonopyruvate decarboxylase compare
BPHYT_RS29655 -2.5 -1.7 polysaccharide deacetylase compare
BPHYT_RS20235 -2.5 -4.8 iron ABC transporter compare
BPHYT_RS07660 -2.5 -1.5 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS01625 -2.5 -1.7 chemotaxis protein CheY compare
BPHYT_RS14865 -2.5 -1.2 UDP-glucose 6-dehydrogenase compare
BPHYT_RS09585 -2.5 -0.9 hypothetical protein compare
BPHYT_RS14670 -2.4 -0.9 hypothetical protein compare
BPHYT_RS36365 -2.4 -1.1 hypothetical protein compare
BPHYT_RS21485 -2.4 -0.9 hypothetical protein compare
BPHYT_RS01975 -2.3 -1.1 hypothetical protein compare
BPHYT_RS02570 -2.3 -6.9 phosphocarrier protein HPr compare
BPHYT_RS02755 -2.3 -1.3 cyd operon protein YbgT compare
BPHYT_RS11635 -2.3 -0.6 RNA polymerase subunit sigma-24 compare
BPHYT_RS17830 -2.3 -3.3 histidine kinase compare
BPHYT_RS20245 -2.3 -3.2 iron ABC transporter substrate-binding protein compare
BPHYT_RS21385 -2.3 -1.1 short-chain dehydrogenase compare
BPHYT_RS22940 -2.3 -1.1 pilus assembly protein TadE compare
BPHYT_RS21350 -2.3 -1.2 ADP-glucose pyrophosphorylase compare
BPHYT_RS14060 -2.2 -1.0 peptidase M23 compare
BPHYT_RS16555 -2.2 -3.2 cation transporter compare
BPHYT_RS02285 -2.2 -4.6 cell division protein compare
BPHYT_RS26750 -2.2 -1.1 aldolase compare
BPHYT_RS12550 -2.2 -0.6 GTP-binding protein HflX compare
BPHYT_RS18660 -2.1 -1.5 hypothetical protein compare
BPHYT_RS08235 -2.1 -0.6 nucleoprotein, Hfg, host factor I compare
BPHYT_RS29870 -2.1 -1.0 2-dehydropantoate 2-reductase compare
BPHYT_RS19985 -2.1 -0.8 CoA-transferase compare
BPHYT_RS06200 -2.0 -4.3 glycosyl transferase compare
BPHYT_RS26025 -2.0 -0.5 hypothetical protein compare
BPHYT_RS11970 -2.0 -0.9 cupin compare
BPHYT_RS33135 -1.9 -1.8 LysR family transcriptional regulator compare
BPHYT_RS10005 -1.9 -0.7 hypothetical protein compare
BPHYT_RS27430 -1.9 -0.9 LysR family transcriptional regulator compare
BPHYT_RS28945 -1.9 -2.2 endo-1,4-D-glucanase compare
BPHYT_RS28910 -1.9 -1.3 diguanylate phosphodiesterase compare
BPHYT_RS04450 -1.9 -4.0 UDP-glucose 4-epimerase compare
BPHYT_RS36130 -1.9 -1.0 hypothetical protein compare
BPHYT_RS18610 -1.9 -3.2 lytic transglycosylase compare
BPHYT_RS27155 -1.9 -0.9 peroxiredoxin compare
BPHYT_RS10705 -1.9 -2.9 MFS transporter compare
BPHYT_RS21855 -1.9 -2.6 hypothetical protein compare
BPHYT_RS13605 -1.8 -0.7 tRNA-Pro compare
BPHYT_RS22000 -1.8 -1.5 hypothetical protein compare
BPHYT_RS33225 -1.8 -5.8 NAD-dependent epimerase/dehydratase compare
BPHYT_RS30315 -1.8 -2.0 LysR family transcriptional regulator compare
BPHYT_RS13390 -1.8 -0.7 IclR family transcriptional regulator compare
BPHYT_RS09100 -1.8 -5.3 stationary phase survival protein SurE compare
BPHYT_RS30610 -1.8 -1.6 major facilitator transporter compare
BPHYT_RS23445 -1.8 -1.4 hexuronate transporter compare
BPHYT_RS11265 -1.8 -1.0 hypothetical protein compare
BPHYT_RS12615 -1.8 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS28485 -1.8 -0.5 GntR family transcriptional regulator compare
BPHYT_RS09920 -1.8 -1.5 amino acid permease compare
BPHYT_RS10270 -1.8 -1.8 D-amino acid dehydrogenase compare
BPHYT_RS30745 -1.7 -1.5 hypothetical protein compare
BPHYT_RS09565 -1.7 -1.0 acetyl-CoA acetyltransferase compare
BPHYT_RS23100 -1.7 -1.3 sugar ABC transporter substrate-binding protein compare
BPHYT_RS21975 -1.7 -2.0 2-dehydropantoate 2-reductase compare
BPHYT_RS36525 -1.7 -1.1 hypothetical protein compare
BPHYT_RS02415 -1.7 -3.0 cytochrome C550 compare
BPHYT_RS06320 -1.7 -0.6 chemotaxis protein CheY compare
BPHYT_RS09465 -1.7 -1.1 transcriptional regulator compare
BPHYT_RS07500 -1.7 -2.5 amidohydrolase compare
BPHYT_RS26355 -1.7 -0.9 hypothetical protein compare
BPHYT_RS00940 -1.7 -1.9 transposase compare
BPHYT_RS35205 -1.7 -1.3 hypothetical protein compare
BPHYT_RS22855 -1.6 -2.2 aldehyde-activating protein compare
BPHYT_RS02575 -1.6 -7.5 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS10940 -1.6 -2.3 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase compare
BPHYT_RS11155 -1.6 -0.8 hypothetical protein compare
BPHYT_RS03655 -1.6 -0.9 membrane protein compare
BPHYT_RS07480 -1.6 -0.8 FAD-dependent oxidoreductase compare
BPHYT_RS34780 -1.6 -2.1 phytoene synthase compare
BPHYT_RS35385 -1.6 -3.0 GntR family transcriptional regulator compare
BPHYT_RS25585 -1.6 -1.2 membrane protein compare
BPHYT_RS05285 -1.6 -0.8 hypothetical protein compare
BPHYT_RS01950 -1.6 -2.5 phosphoheptose isomerase compare
BPHYT_RS07845 -1.6 -1.7 LysR family transcriptional regulator compare
BPHYT_RS24220 -1.6 -1.2 alpha/beta hydrolase compare
BPHYT_RS22215 -1.6 -1.6 hypothetical protein compare
BPHYT_RS02860 -1.6 -0.4 membrane protein compare
BPHYT_RS20850 -1.6 -2.5 multidrug DMT transporter permease compare
BPHYT_RS25780 -1.6 -0.4 DeoR faimly transcriptional regulator compare
BPHYT_RS28110 -1.6 -1.0 hypothetical protein compare
BPHYT_RS15915 -1.6 -6.8 ornithine carbamoyltransferase compare
BPHYT_RS23740 -1.6 -3.4 AraC family transcriptional regulator compare
BPHYT_RS19620 -1.6 -2.7 general secretion pathway protein GspH compare
BPHYT_RS11125 -1.6 -0.7 alkylhydroperoxidase compare
BPHYT_RS06255 -1.6 -1.8 spore coat protein U compare
BPHYT_RS25220 -1.5 -1.7 ferredoxin oxidoreductase compare
BPHYT_RS01180 -1.5 -2.2 AraC family transcriptional regulator compare
BPHYT_RS09905 -1.5 -0.6 hypothetical protein compare
BPHYT_RS14550 -1.5 -0.6 tRNA-Asn compare
BPHYT_RS11805 -1.5 -1.2 hypothetical protein compare
BPHYT_RS23520 -1.5 -1.0 peroxidase compare
BPHYT_RS25140 -1.5 -0.5 hypothetical protein compare
BPHYT_RS23415 -1.5 -3.2 GDSL family lipase compare
BPHYT_RS23675 -1.5 -0.9 lysine transporter LysE compare
BPHYT_RS20095 -1.5 -0.7 transcriptional regulator compare
BPHYT_RS22200 -1.5 -1.9 cardiolipin synthetase compare
BPHYT_RS30790 -1.5 -2.5 porin compare
BPHYT_RS24955 -1.5 -1.2 cytochrome C peroxidase compare
BPHYT_RS22530 -1.5 -1.1 N5,N10-methylene tetrahydromethanopterin reductase compare
BPHYT_RS17240 -1.5 -0.4 cell division protein FtsW compare
BPHYT_RS09365 -1.5 -1.4 cytochrome C2 compare
BPHYT_RS28680 -1.5 -1.5 porin compare
BPHYT_RS27760 -1.5 -1.1 ABC transporter compare
BPHYT_RS27410 -1.5 -1.1 amidohydrolase compare
BPHYT_RS28705 -1.5 -0.9 IclR family transcriptional regulator compare
BPHYT_RS27060 -1.5 -0.9 photosystem reaction center subunit H compare
BPHYT_RS13315 -1.5 -1.2 dihydropyrimidine dehydrogenase subunit A compare
BPHYT_RS03410 -1.4 -1.1 queuine tRNA-ribosyltransferase compare
BPHYT_RS29750 -1.4 -1.4 phosphoenolpyruvate phosphomutase compare
BPHYT_RS17745 -1.4 -6.1 toluene tolerance family protein compare
BPHYT_RS09185 -1.4 -1.5 hypothetical protein compare
BPHYT_RS30140 -1.4 -0.5 3-methylitaconate isomerase compare
BPHYT_RS36010 -1.4 -2.9 hypothetical protein compare
BPHYT_RS35300 -1.4 -1.8 flavin reductase compare
BPHYT_RS28300 -1.4 -0.5 histone nucleoid-structuring protein H-NS compare
BPHYT_RS14245 -1.4 -0.5 membrane protein compare
BPHYT_RS34155 -1.4 -1.0 3-hydroxybutyryl-CoA dehydrogenase compare
BPHYT_RS28660 -1.4 -0.8 polyvinylalcohol dehydrogenase compare
BPHYT_RS33050 -1.4 -1.7 LuxR family transcriptional regulator compare
BPHYT_RS22205 -1.4 -1.3 hypothetical protein compare
BPHYT_RS11110 -1.4 -3.0 chemotaxis protein CheY compare
BPHYT_RS17620 -1.4 -5.3 cytochrome C compare
BPHYT_RS33805 -1.4 -0.6 hypothetical protein compare
BPHYT_RS09655 -1.4 -3.6 mechanosensitive ion channel protein MscS compare
BPHYT_RS33465 -1.3 -3.6 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS23990 -1.3 -0.7 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS33155 -1.3 -1.1 hypothetical protein compare
BPHYT_RS28690 -1.3 -1.4 diguanylate phosphodiesterase compare
BPHYT_RS33685 -1.3 -4.3 molybdate ABC transporter substrate-binding protein compare
BPHYT_RS35800 -1.3 -1.9 TetR family transcriptional regulator compare
BPHYT_RS24205 -1.3 -1.8 aldolase compare
BPHYT_RS06990 -1.3 -0.5 membrane protein compare
BPHYT_RS34295 -1.3 -0.7 fimbrial protein compare
BPHYT_RS26380 -1.3 -0.9 cobalamin biosynthesis protein CobT compare
BPHYT_RS26540 -1.3 -0.9 hypothetical protein compare
BPHYT_RS34410 -1.3 -1.0 hypothetical protein compare
BPHYT_RS03100 -1.3 -1.5 peptidase compare
BPHYT_RS32275 -1.3 -3.3 membrane protein compare
BPHYT_RS03170 -1.3 -0.6 membrane protein compare
BPHYT_RS00855 -1.3 -1.1 hypothetical protein compare
BPHYT_RS17760 -1.3 -4.9 ABC transporter permease compare
BPHYT_RS20065 -1.3 -1.4 hypothetical protein compare
BPHYT_RS07400 -1.3 -1.1 hypothetical protein compare
BPHYT_RS10635 -1.3 -1.0 transcriptional regulator compare
BPHYT_RS30145 -1.3 -2.2 aconitate hydratase compare
BPHYT_RS36275 -1.3 -0.6 hypothetical protein compare
BPHYT_RS33585 -1.3 -1.3 exodeoxyribonuclease VII small subunit compare
BPHYT_RS27455 -1.3 -0.7 rod shape-determining protein MreB compare
BPHYT_RS17630 -1.3 -5.2 ubiquinol-cytochrome C reductase compare
BPHYT_RS05895 -1.3 -0.6 hypothetical protein compare
BPHYT_RS05845 -1.3 -1.9 hypothetical protein compare
BPHYT_RS02765 -1.3 -0.8 cytochrome BD oxidase subunit I compare
BPHYT_RS10750 -1.3 -0.5 LysR family transcriptional regulator compare
BPHYT_RS29620 -1.3 -0.6 hypothetical protein compare
BPHYT_RS23770 -1.2 -0.9 GntR family transcriptional regulator compare
BPHYT_RS01115 -1.2 -1.1 hypothetical protein compare
BPHYT_RS10240 -1.2 -0.6 translation initiation inhibitor compare
BPHYT_RS17625 -1.2 -8.2 cytochrome B compare
BPHYT_RS32360 -1.2 -0.7 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS06900 -1.2 -2.7 aspartate aminotransferase compare
BPHYT_RS11335 -1.2 -1.1 hypothetical protein compare
BPHYT_RS25135 -1.2 -1.0 hypothetical protein compare
BPHYT_RS17805 -1.2 -1.6 hypothetical protein compare
BPHYT_RS17765 -1.2 -4.0 toluene ABC transporter ATP-binding protein compare
BPHYT_RS08130 -1.2 -0.7 transposase compare
BPHYT_RS28955 -1.2 -0.8 hypothetical protein compare
BPHYT_RS14840 -1.2 -3.9 lytic transglycosylase compare
BPHYT_RS27160 -1.2 -0.7 hypothetical protein compare
BPHYT_RS34400 -1.2 -1.1 hypothetical protein compare
BPHYT_RS17675 -1.2 -1.6 phosphoribosyl-AMP cyclohydrolase compare
BPHYT_RS17095 -1.2 -1.9 proline--tRNA ligase compare
BPHYT_RS31110 -1.2 -1.2 hypothetical protein compare
BPHYT_RS01780 -1.2 -3.8 hypothetical protein compare
BPHYT_RS34815 -1.2 -0.6 ABC transporter compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments