Experiment set39S344 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO2 MOI 0.1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS32360 -4.2 -1.4 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS21485 -3.9 -1.3 hypothetical protein compare
BPHYT_RS33805 -3.6 -1.2 hypothetical protein compare
BPHYT_RS24590 -3.4 -1.1 DeoR faimly transcriptional regulator compare
BPHYT_RS06335 -3.4 -1.1 CopG family transcriptional regulator compare
BPHYT_RS10135 -3.1 -1.0 hypothetical protein compare
BPHYT_RS33360 -3.0 -2.2 formyl-CoA transferase compare
BPHYT_RS26490 -2.9 -0.9 hypothetical protein compare
BPHYT_RS21350 -2.9 -1.2 ADP-glucose pyrophosphorylase compare
BPHYT_RS29745 -2.8 -2.1 phosphonopyruvate decarboxylase compare
BPHYT_RS11960 -2.8 -0.9 MarR family transcriptional regulator compare
BPHYT_RS31050 -2.7 -0.9 epimerase compare
BPHYT_RS25870 -2.7 -0.9 type III secretion system ATPase compare
BPHYT_RS09280 -2.7 -0.9 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS25500 -2.7 -1.5 hypothetical protein compare
BPHYT_RS14865 -2.6 -1.4 UDP-glucose 6-dehydrogenase compare
BPHYT_RS03655 -2.4 -1.0 membrane protein compare
BPHYT_RS24315 -2.4 -1.3 phosphoribosyltransferase compare
BPHYT_RS00940 -2.3 -2.9 transposase compare
BPHYT_RS14060 -2.3 -1.3 peptidase M23 compare
BPHYT_RS11635 -2.3 -0.7 RNA polymerase subunit sigma-24 compare
BPHYT_RS11155 -2.3 -1.0 hypothetical protein compare
BPHYT_RS27655 -2.3 -1.0 potassium transporter compare
BPHYT_RS13320 -2.3 -1.0 allantoate amidohydrolase compare
BPHYT_RS28955 -2.3 -1.3 hypothetical protein compare
BPHYT_RS28680 -2.2 -2.0 porin compare
BPHYT_RS25335 -2.2 -0.7 hypothetical protein compare
BPHYT_RS34655 -2.1 -1.3 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS33370 -2.0 -1.3 LysR family transcriptional regulator compare
BPHYT_RS07515 -2.0 -1.2 photosystem reaction center subunit H compare
BPHYT_RS22910 -2.0 -0.6 hypothetical protein compare
BPHYT_RS16180 -2.0 -0.6 TetR family transcriptional regulator compare
BPHYT_RS16555 -2.0 -2.2 cation transporter compare
BPHYT_RS22360 -1.9 -1.0 response regulator receiver compare
BPHYT_RS11970 -1.9 -1.1 cupin compare
BPHYT_RS26305 -1.9 -1.9 exonuclease compare
BPHYT_RS08385 -1.9 -1.1 secretion protein compare
BPHYT_RS10740 -1.8 -0.8 LuxR family transcriptional regulator compare
BPHYT_RS30490 -1.8 -0.8 2-haloalkanoic acid dehalogenase compare
BPHYT_RS12615 -1.8 -0.6 dihydrodipicolinate synthase compare
BPHYT_RS11795 -1.8 -0.8 membrane protein compare
BPHYT_RS20235 -1.7 -4.2 iron ABC transporter compare
BPHYT_RS05290 -1.7 -0.8 hypothetical protein compare
BPHYT_RS01485 -1.7 -1.1 histidine kinase compare
BPHYT_RS12510 -1.7 -1.3 RNA-binding protein compare
BPHYT_RS25095 -1.7 -1.4 AraC family transcriptional regulator compare
BPHYT_RS02365 -1.7 -1.2 hypothetical protein compare
BPHYT_RS25780 -1.7 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS32525 -1.6 -1.4 hypothetical protein compare
BPHYT_RS10850 -1.6 -1.3 LysR family transcriptional regulator compare
BPHYT_RS02985 -1.6 -1.8 MaoC family dehydratase compare
BPHYT_RS21620 -1.6 -1.0 GCN5 family acetyltransferase compare
BPHYT_RS31905 -1.6 -1.3 hypothetical protein compare
BPHYT_RS22930 -1.6 -0.7 type II secretion system protein compare
BPHYT_RS31260 -1.6 -1.0 histidine kinase compare
BPHYT_RS03065 -1.6 -1.1 LuxR family transcriptional regulator compare
BPHYT_RS07595 -1.6 -1.1 membrane protein compare
BPHYT_RS22255 -1.6 -1.7 hypothetical protein compare
BPHYT_RS27970 -1.5 -2.6 sugar ABC transporter permease compare
BPHYT_RS24670 -1.5 -1.7 ABC transporter permease compare
BPHYT_RS17240 -1.5 -0.5 cell division protein FtsW compare
BPHYT_RS14550 -1.5 -0.7 tRNA-Asn compare
BPHYT_RS10165 -1.5 -0.7 transcriptional regulator compare
BPHYT_RS10680 -1.5 -1.6 LysR family transcriptional regulator compare
BPHYT_RS29920 -1.5 -0.7 hypothetical protein compare
BPHYT_RS28620 -1.5 -1.3 enoyl-CoA hydratase compare
BPHYT_RS30795 -1.5 -1.2 short-chain dehydrogenase compare
BPHYT_RS18610 -1.5 -3.0 lytic transglycosylase compare
BPHYT_RS14920 -1.5 -1.7 hypothetical protein compare
BPHYT_RS21685 -1.5 -1.6 cobalamin biosynthesis protein CobS compare
BPHYT_RS00835 -1.4 -1.6 plasmid stabilization protein compare
BPHYT_RS20245 -1.4 -3.5 iron ABC transporter substrate-binding protein compare
BPHYT_RS31830 -1.4 -1.7 hypothetical protein compare
BPHYT_RS14245 -1.4 -0.6 membrane protein compare
BPHYT_RS28905 -1.4 -0.9 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS02765 -1.4 -1.0 cytochrome BD oxidase subunit I compare
BPHYT_RS05565 -1.4 -1.3 membrane protein compare
BPHYT_RS28300 -1.4 -0.6 histone nucleoid-structuring protein H-NS compare
BPHYT_RS14210 -1.4 -2.6 hydroxyacylglutathione hydrolase compare
BPHYT_RS30515 -1.4 -1.0 sorbose dehydrogenase compare
BPHYT_RS27850 -1.4 -0.9 hemerythrin compare
BPHYT_RS18660 -1.4 -1.4 hypothetical protein compare
BPHYT_RS22265 -1.4 -0.8 hypothetical protein compare
BPHYT_RS09585 -1.4 -1.0 hypothetical protein compare
BPHYT_RS30130 -1.4 -3.0 AraC family transcriptional regulator compare
BPHYT_RS27405 -1.3 -2.1 aldehyde dehydrogenase compare
BPHYT_RS23570 -1.3 -2.1 chemotaxis protein CheY compare
BPHYT_RS13160 -1.3 -0.8 membrane protein compare
BPHYT_RS26855 -1.3 -0.9 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS04330 -1.3 -4.8 hypothetical protein compare
BPHYT_RS11150 -1.3 -1.3 LysR family transcriptional regulator compare
BPHYT_RS33580 -1.3 -2.6 geranyltranstransferase compare
BPHYT_RS27305 -1.3 -0.5 hypothetical protein compare
BPHYT_RS19335 -1.3 -0.9 hypothetical protein compare
BPHYT_RS06710 -1.3 -0.7 hypothetical protein compare
BPHYT_RS03375 -1.3 -1.0 NAD(P) transhydrogenase compare
BPHYT_RS12295 -1.2 -1.4 LysR family transcriptional regulator compare
BPHYT_RS12820 -1.2 -4.3 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS31255 -1.2 -0.8 cytochrome B561 compare
BPHYT_RS15565 -1.2 -1.5 membrane protein compare
BPHYT_RS23990 -1.2 -0.8 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS03090 -1.2 -1.3 hypothetical protein compare
BPHYT_RS29620 -1.2 -0.7 hypothetical protein compare
BPHYT_RS34410 -1.2 -1.1 hypothetical protein compare
BPHYT_RS25805 -1.2 -2.2 deoxyribose kinase (EC 2.7.1.15) (from data) compare
BPHYT_RS26715 -1.2 -1.8 GTP-binding protein compare
BPHYT_RS05530 -1.2 -1.9 hypothetical protein compare
BPHYT_RS34305 -1.2 -2.0 succinate-semialdehyde dehydrogenase compare
BPHYT_RS25585 -1.2 -1.1 membrane protein compare
BPHYT_RS21940 -1.2 -1.1 hemolysin D compare
BPHYT_RS07475 -1.2 -0.8 nitrate reductase compare
BPHYT_RS30450 -1.2 -0.5 ABC transporter permease compare
BPHYT_RS28280 -1.2 -1.0 hypothetical protein compare
BPHYT_RS33185 -1.2 -3.8 methyltransferase type 11 compare
BPHYT_RS01975 -1.2 -0.9 hypothetical protein compare
BPHYT_RS17745 -1.2 -4.5 toluene tolerance family protein compare
BPHYT_RS00740 -1.2 -1.7 hypothetical protein compare
BPHYT_RS11890 -1.1 -1.6 hypothetical protein compare
BPHYT_RS11235 -1.1 -0.6 hypothetical protein compare
BPHYT_RS28840 -1.1 -1.8 oxidoreductase compare
BPHYT_RS08600 -1.1 -1.1 hypothetical protein compare
BPHYT_RS23210 -1.1 -1.7 MFS transporter compare
BPHYT_RS21295 -1.1 -3.2 AraC family transcriptional regulator compare
BPHYT_RS09545 -1.1 -0.9 peptide methionine sulfoxide reductase compare
BPHYT_RS21905 -1.1 -0.5 IclR family transcriptional regulator compare
BPHYT_RS14665 -1.1 -1.1 hypothetical protein compare
BPHYT_RS08490 -1.1 -1.2 Crp/Fnr family transcriptional regulator compare
BPHYT_RS14840 -1.1 -5.0 lytic transglycosylase compare
BPHYT_RS27465 -1.1 -2.4 DSBA oxidoreductase compare
BPHYT_RS14505 -1.1 -1.2 membrane protein compare
BPHYT_RS33060 -1.1 -1.2 hypothetical protein compare
BPHYT_RS02285 -1.1 -3.6 cell division protein compare
BPHYT_RS15365 -1.1 -3.4 Bcr/CflA family drug resistance efflux transporter compare
BPHYT_RS20845 -1.1 -0.8 peroxidase compare
BPHYT_RS24430 -1.1 -2.5 type VI secretion protein ImpA compare
BPHYT_RS27495 -1.1 -0.5 hypothetical protein compare
BPHYT_RS02575 -1.1 -7.3 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS09355 -1.1 -0.9 LysR family transcriptional regulator compare
BPHYT_RS31840 -1.1 -1.5 anhydrase compare
BPHYT_RS24750 -1.1 -2.2 hypothetical protein compare
BPHYT_RS16195 -1.1 -1.9 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS28140 -1.1 -1.4 translation initiation factor SUI1 compare
BPHYT_RS12925 -1.1 -0.5 exodeoxyribonuclease III compare
BPHYT_RS17620 -1.1 -7.0 cytochrome C compare
BPHYT_RS23425 -1.1 -2.8 mannitol dehydrogenase compare
BPHYT_RS03830 -1.1 -1.3 hypothetical protein compare
BPHYT_RS21195 -1.1 -2.6 hypothetical protein compare
BPHYT_RS24755 -1.1 -1.4 catalase compare
BPHYT_RS04595 -1.1 -0.9 cytoplasmic protein compare
BPHYT_RS10895 -1.1 -1.8 transcriptional regulator compare
BPHYT_RS27330 -1.1 -0.8 hypothetical protein compare
BPHYT_RS26660 -1.1 -1.3 precorrin-4 C11-methyltransferase compare
BPHYT_RS15915 -1.1 -3.9 ornithine carbamoyltransferase compare
BPHYT_RS10540 -1.1 -0.6 secretion protein compare
BPHYT_RS02760 -1.1 -0.6 cytochrome BD oxidase subunit II compare
BPHYT_RS35835 -1.1 -0.9 hypothetical protein compare
BPHYT_RS05690 -1.0 -1.0 hypothetical protein compare
BPHYT_RS23730 -1.0 -1.7 multidrug DMT transporter permease compare
BPHYT_RS26355 -1.0 -0.8 hypothetical protein compare
BPHYT_RS24505 -1.0 -2.4 glyoxalase compare
BPHYT_RS04965 -1.0 -3.9 ATP-binding protein compare
BPHYT_RS11680 -1.0 -0.8 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS21335 -1.0 -0.7 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS11125 -1.0 -0.6 alkylhydroperoxidase compare
BPHYT_RS22730 -1.0 -1.3 serine/threonine kinase compare
BPHYT_RS25515 -1.0 -0.9 glutathione S-transferase compare
BPHYT_RS20225 -1.0 -3.4 taurine catabolism dioxygenase tauD/tfdA compare
BPHYT_RS29320 -1.0 -0.4 histidine kinase compare
BPHYT_RS30825 -1.0 -1.3 extradiol dioxygenase compare
BPHYT_RS07090 -1.0 -1.0 hypothetical protein compare
BPHYT_RS14715 -1.0 -3.0 molybdenum cofactor biosynthesis protein MogA compare
BPHYT_RS05765 -1.0 -2.7 portal protein compare
BPHYT_RS03320 -1.0 -1.2 lactoylglutathione lyase compare
BPHYT_RS23695 -1.0 -1.9 peptidase S53 compare
BPHYT_RS28715 -1.0 -1.5 cupin compare
BPHYT_RS23090 -1.0 -0.9 histidine kinase compare
BPHYT_RS27995 -1.0 -1.1 hypothetical protein compare
BPHYT_RS03645 -1.0 -0.9 tRNA dimethylallyltransferase compare
BPHYT_RS10095 -1.0 -0.8 integrase compare
BPHYT_RS15280 -1.0 -2.8 porin compare
BPHYT_RS05175 -1.0 -1.4 hypothetical protein compare
BPHYT_RS06350 -1.0 -0.8 chemotaxis protein CheY compare
BPHYT_RS35315 -1.0 -1.2 threonyl-tRNA synthetase compare
BPHYT_RS29540 -1.0 -0.6 aldolase compare
BPHYT_RS36220 -1.0 -0.6 hypothetical protein compare
BPHYT_RS17830 -0.9 -2.0 histidine kinase compare
BPHYT_RS16320 -0.9 -2.1 cyclic pyranopterin monophosphate synthase accessory protein compare
BPHYT_RS00855 -0.9 -1.0 hypothetical protein compare
BPHYT_RS08360 -0.9 -0.9 LysR family transcriptional regulator compare
BPHYT_RS34260 -0.9 -1.3 hypothetical protein compare
BPHYT_RS24255 -0.9 -1.0 hypothetical protein compare
BPHYT_RS27720 -0.9 -0.9 hypothetical protein compare
BPHYT_RS32825 -0.9 -2.5 Xylose isomerase (EC 5.3.1.5) (from data) compare
BPHYT_RS15075 -0.9 -0.5 dihydrokaempferol 4-reductase compare
BPHYT_RS05320 -0.9 -0.6 beta-lactamase compare
BPHYT_RS29870 -0.9 -0.7 2-dehydropantoate 2-reductase compare
BPHYT_RS21860 -0.9 -0.7 hypothetical protein compare
BPHYT_RS17625 -0.9 -6.0 cytochrome B compare
BPHYT_RS02570 -0.9 -4.1 phosphocarrier protein HPr compare
BPHYT_RS35590 -0.9 -2.3 tryptophanyl-tRNA synthetase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments