Experiment set39S344 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO2 MOI 0.1

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS11705 +3.5 2.6 hypothetical protein compare
BPHYT_RS19570 +3.1 27.3 sodium/hydrogen exchanger compare
BPHYT_RS19565 +3.0 22.0 gamma-glutamyl:cysteine ligase compare
BPHYT_RS14140 +2.8 6.5 phosphate transporter permease subunit PstC compare
BPHYT_RS33820 +2.7 25.3 histidine kinase compare
BPHYT_RS02905 +2.3 21.3 RNA polymerase subunit sigma-54 compare
BPHYT_RS02595 +2.1 2.9 sulfurtransferase compare
BPHYT_RS05575 +2.1 14.4 Fis family transcriptional regulator compare
BPHYT_RS09330 +2.1 16.6 phytoene synthase compare
BPHYT_RS25935 +2.0 1.6 type III secretion protein compare
BPHYT_RS05560 +2.0 13.6 Fis family transcriptional regulator compare
BPHYT_RS04945 +2.0 17.5 membrane protein compare
BPHYT_RS13645 +1.9 17.2 threonine--tRNA ligase compare
BPHYT_RS33920 +1.9 15.0 type II citrate synthase compare
BPHYT_RS06075 +1.9 10.4 hypothetical protein compare
BPHYT_RS12845 +1.9 14.2 ATPase compare
BPHYT_RS18655 +1.8 7.6 3-oxoacyl-ACP synthase compare
BPHYT_RS04950 +1.8 13.3 hypothetical protein compare
BPHYT_RS05590 +1.8 13.3 trehalose-6-phosphate synthase compare
BPHYT_RS09500 +1.8 8.0 glucose-6-phosphate isomerase compare
BPHYT_RS22455 +1.8 1.6 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS09815 +1.7 1.9 malate synthase compare
BPHYT_RS06530 +1.7 2.1 membrane protein compare
BPHYT_RS18590 +1.7 1.4 hypothetical protein compare
BPHYT_RS12725 +1.7 13.7 regulator compare
BPHYT_RS06175 +1.6 3.4 LPS biosynthesis compare
BPHYT_RS23910 +1.6 4.0 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS30085 +1.6 2.5 hypothetical protein compare
BPHYT_RS30995 +1.6 0.8 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS05610 +1.6 11.9 DNA-cytosine methyltransferase compare
BPHYT_RS08995 +1.5 1.5 hypothetical protein compare
BPHYT_RS28670 +1.5 2.2 MFS transporter compare
BPHYT_RS09660 +1.5 9.4 trehalose-6-phosphate synthase compare
BPHYT_RS10400 +1.5 1.6 taurine ABC transporter permease compare
BPHYT_RS25770 +1.5 1.2 hypothetical protein compare
BPHYT_RS04940 +1.5 2.5 hypothetical protein compare
BPHYT_RS14485 +1.5 4.7 ribonuclease E compare
BPHYT_RS14395 +1.5 7.2 sugar dehydratase compare
BPHYT_RS13605 +1.5 1.5 tRNA-Pro compare
BPHYT_RS12590 +1.5 2.1 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS06435 +1.4 3.0 hypothetical protein compare
BPHYT_RS03620 +1.4 7.8 poly(A) polymerase compare
BPHYT_RS04885 +1.4 1.5 threonine-phosphate decarboxylase compare
BPHYT_RS05155 +1.4 4.8 acetyltransferase GCN5 compare
BPHYT_RS02640 +1.4 9.9 cytochrome C oxidase compare
BPHYT_RS20715 +1.4 2.3 peptidase compare
BPHYT_RS01455 +1.4 1.6 peptide deformylase compare
BPHYT_RS27890 +1.4 0.7 hypothetical protein compare
BPHYT_RS25970 +1.4 1.0 urea amidolyase compare
BPHYT_RS05615 +1.4 1.3 hypothetical protein compare
BPHYT_RS08850 +1.4 0.6 transcriptional regulator compare
BPHYT_RS06985 +1.4 8.0 fumarate hydratase compare
BPHYT_RS07840 +1.3 1.8 muconate cycloisomerase compare
BPHYT_RS26025 +1.3 0.9 hypothetical protein compare
BPHYT_RS12840 +1.3 3.3 pyruvate dehydrogenase compare
BPHYT_RS02525 +1.3 6.3 membrane protein compare
BPHYT_RS08945 +1.3 10.2 hypothetical protein compare
BPHYT_RS02650 +1.3 3.7 membrane protein compare
BPHYT_RS15710 +1.3 0.8 ATP-dependent Clp protease ATP-binding protein compare
BPHYT_RS14855 +1.3 0.5 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS34185 +1.3 3.0 cold-shock protein compare
BPHYT_RS35770 +1.3 1.5 glyoxalase compare
BPHYT_RS28485 +1.3 0.8 GntR family transcriptional regulator compare
BPHYT_RS12465 +1.3 1.9 inositol monophosphatase compare
BPHYT_RS02435 +1.3 2.2 hypothetical protein compare
BPHYT_RS35230 +1.3 2.9 type 11 methyltransferase compare
BPHYT_RS12150 +1.3 9.8 PII uridylyl-transferase compare
BPHYT_RS12535 +1.3 1.0 membrane protein compare
BPHYT_RS27455 +1.2 0.9 rod shape-determining protein MreB compare
BPHYT_RS20545 +1.2 1.6 hypothetical protein compare
BPHYT_RS14145 +1.2 6.4 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS24095 +1.2 3.9 membrane protein compare
BPHYT_RS15620 +1.2 3.3 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS20115 +1.2 2.5 transcriptional regulator compare
BPHYT_RS28965 +1.2 1.8 hypothetical protein compare
BPHYT_RS16390 +1.2 4.2 MarR family transcriptional regulator compare
BPHYT_RS17640 +1.2 1.4 2-alkenal reductase compare
BPHYT_RS09640 +1.2 4.5 DNAase compare
BPHYT_RS06610 +1.2 1.7 triosephosphate isomerase compare
BPHYT_RS33610 +1.2 1.6 DNA polymerase I compare
BPHYT_RS14400 +1.2 3.7 anti-sigma factor compare
BPHYT_RS20440 +1.2 1.2 IclR family transcriptional regulator compare
BPHYT_RS28245 +1.1 1.9 MFS transporter compare
BPHYT_RS36000 +1.1 1.9 hypothetical protein compare
BPHYT_RS31615 +1.1 1.4 thiamine pyrophosphate protein compare
BPHYT_RS10645 +1.1 1.0 cyanate hydratase compare
BPHYT_RS29850 +1.1 1.3 protein tyrosine kinase compare
BPHYT_RS10065 +1.1 1.1 cytochrome C oxidase subunit I compare
BPHYT_RS17100 +1.1 4.7 RNA pyrophosphohydrolase compare
BPHYT_RS29410 +1.1 5.3 HPr kinase compare
BPHYT_RS02865 +1.1 0.7 hypothetical protein compare
BPHYT_RS03625 +1.1 5.4 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS29720 +1.1 1.6 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS05670 +1.1 2.3 hypothetical protein compare
BPHYT_RS02635 +1.1 6.4 membrane protein compare
BPHYT_RS23035 +1.1 2.4 hypothetical protein compare
BPHYT_RS10720 +1.1 1.0 hypothetical protein compare
BPHYT_RS08415 +1.1 2.0 hypothetical protein compare
BPHYT_RS29855 +1.1 1.2 protein-tyrosine-phosphatase compare
BPHYT_RS04290 +1.1 0.6 glycosyl transferase family 2 compare
BPHYT_RS22870 +1.1 0.7 copper transporter compare
BPHYT_RS33390 +1.1 2.0 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS02530 +1.1 6.3 hypothetical protein compare
BPHYT_RS13555 +1.1 2.1 acyl-CoA dehydrogenase compare
BPHYT_RS31225 +1.1 2.0 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS08335 +1.1 1.1 hypothetical protein compare
BPHYT_RS24135 +1.1 1.9 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS33460 +1.1 1.0 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS20055 +1.1 2.2 hypothetical protein compare
BPHYT_RS28470 +1.0 0.9 hypothetical protein compare
BPHYT_RS25645 +1.0 1.8 dehydrogenase compare
BPHYT_RS12990 +1.0 2.5 iron transporter compare
BPHYT_RS36440 +1.0 1.6 hypothetical protein compare
BPHYT_RS28085 +1.0 3.9 Fis family transcriptional regulator compare
BPHYT_RS15325 +1.0 2.5 ribonuclease PH compare
BPHYT_RS29520 +1.0 0.9 hypothetical protein compare
BPHYT_RS25490 +1.0 3.1 hypothetical protein compare
BPHYT_RS04285 +1.0 0.5 rhamnosyltransferase compare
BPHYT_RS07255 +1.0 1.1 4-oxalocrotonate decarboxylase compare
BPHYT_RS18835 +1.0 1.3 flagellar biosynthesis protein FliR compare
BPHYT_RS23455 +1.0 1.0 phosphorylase compare
BPHYT_RS20060 +1.0 1.2 hypothetical protein compare
BPHYT_RS07190 +1.0 1.8 acetyltransferase compare
BPHYT_RS14135 +1.0 5.6 phosphate transporter permease subunit PtsA compare
BPHYT_RS25845 +1.0 0.9 RND transporter MFP subunit compare
BPHYT_RS09905 +1.0 0.8 hypothetical protein compare
BPHYT_RS05850 +1.0 1.5 hypothetical protein compare
BPHYT_RS08665 +1.0 0.8 hypothetical protein compare
BPHYT_RS31550 +1.0 1.8 hypothetical protein compare
BPHYT_RS06455 +1.0 1.9 potassium-transporting ATPase C chain compare
BPHYT_RS28660 +1.0 1.2 polyvinylalcohol dehydrogenase compare
BPHYT_RS10985 +1.0 1.9 MFS transporter compare
BPHYT_RS27370 +1.0 1.1 CoA transferase compare
BPHYT_RS10320 +1.0 3.4 hypothetical protein compare
BPHYT_RS06065 +1.0 5.0 cytochrome C compare
BPHYT_RS03505 +1.0 1.9 FAD-binding protein compare
BPHYT_RS14585 +0.9 1.7 hypothetical protein compare
BPHYT_RS09970 +0.9 2.2 glutathione S-transferase compare
BPHYT_RS04010 +0.9 0.8 glycosyl transferase compare
BPHYT_RS28320 +0.9 2.1 molecular chaperone DnaJ compare
BPHYT_RS23940 +0.9 0.7 GntR family transcriptional regulator compare
BPHYT_RS19325 +0.9 1.8 glycine cleavage system H protein compare
BPHYT_RS31060 +0.9 1.2 capsular polysaccharide biosynthesis protein compare
BPHYT_RS21475 +0.9 1.1 hypothetical protein compare
BPHYT_RS02540 +0.9 2.1 hypothetical protein compare
BPHYT_RS28065 +0.9 0.9 hypothetical protein compare
BPHYT_RS16175 +0.9 0.6 hemolysin D compare
BPHYT_RS25070 +0.9 1.4 choline ABC transporter permease compare
BPHYT_RS01620 +0.9 4.4 sensor histidine kinase compare
BPHYT_RS27295 +0.9 1.6 hypothetical protein compare
BPHYT_RS31130 +0.9 1.5 hypothetical protein compare
BPHYT_RS12635 +0.9 2.0 translation factor Sua5 compare
BPHYT_RS04990 +0.9 2.0 hypothetical protein compare
BPHYT_RS08510 +0.9 1.9 acyl-CoA dehydrogenase compare
BPHYT_RS09145 +0.9 6.2 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS34025 +0.9 1.2 hypothetical protein compare
BPHYT_RS32735 +0.9 2.8 hypothetical protein compare
BPHYT_RS02665 +0.9 6.4 MFS transporter compare
BPHYT_RS15320 +0.9 2.0 hypothetical protein compare
BPHYT_RS12550 +0.9 0.6 GTP-binding protein HflX compare
BPHYT_RS34080 +0.9 1.1 flagellar motor protein MotB compare
BPHYT_RS09000 +0.9 0.8 competence protein ComE compare
BPHYT_RS31785 +0.9 2.1 hypothetical protein compare
BPHYT_RS03450 +0.9 3.1 paraquat-inducible protein A compare
BPHYT_RS05585 +0.9 3.5 hypothetical protein compare
BPHYT_RS15890 +0.9 0.9 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS30845 +0.9 1.6 polyketide cyclase compare
BPHYT_RS08880 +0.9 3.5 phosphate transport regulator compare
BPHYT_RS33400 +0.9 2.1 magnesium transporter CorA compare
BPHYT_RS31515 +0.9 1.8 agmatinase compare
BPHYT_RS27155 +0.9 1.0 peroxiredoxin compare
BPHYT_RS03100 +0.9 1.0 peptidase compare
BPHYT_RS06070 +0.9 5.8 cytochrome C compare
BPHYT_RS08825 +0.9 1.1 tartronate semialdehyde reductase compare
BPHYT_RS23955 +0.9 1.7 LysR family transcriptional regulator compare
BPHYT_RS07490 +0.9 3.2 aldehyde dehydrogenase compare
BPHYT_RS01435 +0.9 7.8 LysR family transcriptional regulator compare
BPHYT_RS25140 +0.9 1.5 hypothetical protein compare
BPHYT_RS26930 +0.8 3.5 mechanosensitive ion channel protein compare
BPHYT_RS31910 +0.8 0.9 hypothetical protein compare
BPHYT_RS12055 +0.8 6.9 phosphoenolpyruvate synthase compare
BPHYT_RS14845 +0.8 0.5 cysteine synthase compare
BPHYT_RS32165 +0.8 3.9 type IV secretion system protein VirB9 compare
BPHYT_RS21330 +0.8 1.3 hypothetical protein compare
BPHYT_RS17885 +0.8 2.9 3-dehydroquinate synthase compare
BPHYT_RS36495 +0.8 3.3 peptidase compare
BPHYT_RS10750 +0.8 0.6 LysR family transcriptional regulator compare
BPHYT_RS36355 +0.8 0.9 hypothetical protein compare
BPHYT_RS17545 +0.8 3.5 cold-shock protein compare
BPHYT_RS28505 +0.8 1.0 5-deoxyglucuronate isomerase compare
BPHYT_RS16430 +0.8 7.2 cytochrome C compare
BPHYT_RS33885 +0.8 6.8 tRNA pseudouridine synthase A compare
BPHYT_RS27580 +0.8 3.4 F0F1 ATP synthase subunit alpha compare
BPHYT_RS34675 +0.8 2.3 DNA-binding protein compare
BPHYT_RS21770 +0.8 1.8 aldehyde dehydrogenase compare
BPHYT_RS21160 +0.8 2.0 NAD(P) transhydrogenase subunit beta compare
BPHYT_RS15120 +0.8 2.0 hypothetical protein compare
BPHYT_RS20105 +0.8 1.5 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS24820 +0.8 2.4 cobyrinic acid a,c-diamide synthase compare
BPHYT_RS04830 +0.8 1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments