Experiment set39S342 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO2 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS28955 -4.5 -1.1 hypothetical protein compare
BPHYT_RS01485 -4.4 -1.1 histidine kinase compare
BPHYT_RS29745 -4.3 -1.8 phosphonopyruvate decarboxylase compare
BPHYT_RS17265 -4.2 -1.0 cell division protein compare
BPHYT_RS04910 -4.2 -1.0 phenylacetic acid degradation protein compare
BPHYT_RS20235 -4.2 -2.4 iron ABC transporter compare
BPHYT_RS18760 -3.9 -1.7 flagellar biosynthesis protein FliT compare
BPHYT_RS28535 -3.7 -0.9 response regulator receiver compare
BPHYT_RS30810 -3.5 -1.2 transcriptional regulator compare
BPHYT_RS26465 -3.3 -0.8 metallophosphoesterase compare
BPHYT_RS06335 -3.3 -0.8 CopG family transcriptional regulator compare
BPHYT_RS13605 -3.2 -0.8 tRNA-Pro compare
BPHYT_RS11795 -3.2 -0.8 membrane protein compare
BPHYT_RS04330 -3.2 -8.8 hypothetical protein compare
BPHYT_RS27410 -3.1 -1.3 amidohydrolase compare
BPHYT_RS08150 -3.1 -0.8 membrane protein compare
BPHYT_RS21625 -3.1 -0.8 LysR family transcriptional regulator compare
BPHYT_RS10645 -3.0 -0.8 cyanate hydratase compare
BPHYT_RS07595 -3.0 -1.1 membrane protein compare
BPHYT_RS01975 -3.0 -1.1 hypothetical protein compare
BPHYT_RS28235 -3.0 -1.5 L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) (from data) compare
BPHYT_RS29920 -3.0 -0.7 hypothetical protein compare
BPHYT_RS10945 -2.9 -1.0 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS28300 -2.9 -0.7 histone nucleoid-structuring protein H-NS compare
BPHYT_RS23385 -2.9 -1.0 group 1 glycosyl transferase compare
BPHYT_RS07090 -2.9 -1.2 hypothetical protein compare
BPHYT_RS32395 -2.8 -0.7 hypothetical protein compare
BPHYT_RS27995 -2.8 -1.4 hypothetical protein compare
BPHYT_RS26490 -2.8 -0.7 hypothetical protein compare
BPHYT_RS26080 -2.8 -0.7 ABC transporter ATPase compare
BPHYT_RS21620 -2.7 -1.0 GCN5 family acetyltransferase compare
BPHYT_RS07605 -2.7 -2.5 hypothetical protein compare
BPHYT_RS04965 -2.7 -5.9 ATP-binding protein compare
BPHYT_RS10750 -2.7 -0.7 LysR family transcriptional regulator compare
BPHYT_RS23460 -2.6 -0.7 AraC family transcriptional regulator compare
BPHYT_RS09860 -2.6 -0.7 pilus assembly protein PilP compare
BPHYT_RS36385 -2.6 -0.6 TetR family transcriptional regulator compare
BPHYT_RS19610 -2.6 -0.9 general secretion pathway protein GspC compare
BPHYT_RS21905 -2.6 -0.6 IclR family transcriptional regulator compare
BPHYT_RS33185 -2.5 -4.3 methyltransferase type 11 compare
BPHYT_RS21335 -2.5 -0.9 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS18590 -2.5 -0.6 hypothetical protein compare
BPHYT_RS25590 -2.5 -2.3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
BPHYT_RS17920 -2.5 -1.1 protein CyaY compare
BPHYT_RS20245 -2.4 -3.7 iron ABC transporter substrate-binding protein compare
BPHYT_RS04630 -2.4 -1.8 amino acid ABC transporter permease compare
BPHYT_RS16065 -2.4 -0.6 LacI family transcriptional regulator compare
BPHYT_RS14865 -2.4 -1.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS34780 -2.3 -1.9 phytoene synthase compare
BPHYT_RS34410 -2.3 -1.2 hypothetical protein compare
BPHYT_RS12500 -2.3 -2.1 hypothetical protein compare
BPHYT_RS02285 -2.3 -4.3 cell division protein compare
BPHYT_RS11805 -2.3 -1.1 hypothetical protein compare
BPHYT_RS14670 -2.3 -0.8 hypothetical protein compare
BPHYT_RS03655 -2.3 -0.8 membrane protein compare
BPHYT_RS24955 -2.3 -1.9 cytochrome C peroxidase compare
BPHYT_RS31910 -2.3 -0.8 hypothetical protein compare
BPHYT_RS33765 -2.3 -0.6 membrane protein compare
BPHYT_RS22265 -2.2 -0.8 hypothetical protein compare
BPHYT_RS11635 -2.2 -0.5 RNA polymerase subunit sigma-24 compare
BPHYT_RS33180 -2.2 -5.4 hypothetical protein compare
BPHYT_RS21330 -2.2 -1.1 hypothetical protein compare
BPHYT_RS20590 -2.1 -1.8 methionine sulfoxide reductase A compare
BPHYT_RS11060 -2.1 -0.9 4-hydroxybenzoate 3-monooxygenase compare
BPHYT_RS26750 -2.1 -1.0 aldolase compare
BPHYT_RS33905 -2.1 -1.1 3-isopropylmalate dehydratase small subunit compare
BPHYT_RS08235 -2.1 -0.5 nucleoprotein, Hfg, host factor I compare
BPHYT_RS27875 -2.1 -1.4 CreA family protein compare
BPHYT_RS04365 -2.1 -7.3 membrane protein compare
BPHYT_RS09980 -2.1 -0.7 TetR family transcriptional regulator compare
BPHYT_RS10305 -2.1 -0.9 hypothetical protein compare
BPHYT_RS31650 -2.1 -1.0 FAD-binding protein compare
BPHYT_RS22810 -2.1 -1.3 biopolymer transporter ExbB compare
BPHYT_RS35400 -2.1 -2.6 ABC transporter compare
BPHYT_RS07770 -2.1 -1.7 hypothetical protein compare
BPHYT_RS14060 -2.1 -0.9 peptidase M23 compare
BPHYT_RS21035 -2.1 -2.5 ABC transporter permease compare
BPHYT_RS06950 -2.0 -2.5 LysR family transcriptional regulator compare
BPHYT_RS21805 -2.0 -1.6 transcriptional regulator compare
BPHYT_RS20725 -2.0 -1.0 histidine kinase compare
BPHYT_RS34805 -2.0 -6.4 ABC transporter compare
BPHYT_RS27230 -2.0 -0.7 hypothetical protein compare
BPHYT_RS35480 -2.0 -1.4 salicylyl-CoA 5-hydroxylase compare
BPHYT_RS10925 -2.0 -1.5 aldehyde dehydrogenase compare
BPHYT_RS35955 -2.0 -0.8 hypothetical protein compare
BPHYT_RS31590 -2.0 -1.0 hypothetical protein compare
BPHYT_RS17095 -2.0 -2.3 proline--tRNA ligase compare
BPHYT_RS03280 -2.0 -0.7 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS21970 -2.0 -1.5 nucleoside hydrolase compare
BPHYT_RS07050 -1.9 -0.9 membrane protein compare
BPHYT_RS22910 -1.9 -0.5 hypothetical protein compare
BPHYT_RS06710 -1.9 -0.7 hypothetical protein compare
BPHYT_RS23395 -1.9 -0.9 glycosyl transferase compare
BPHYT_RS03065 -1.9 -0.9 LuxR family transcriptional regulator compare
BPHYT_RS33655 -1.9 -1.9 MarR family transcriptional regulator compare
BPHYT_RS34810 -1.9 -1.8 RND transporter compare
BPHYT_RS23770 -1.9 -0.9 GntR family transcriptional regulator compare
BPHYT_RS08490 -1.8 -1.2 Crp/Fnr family transcriptional regulator compare
BPHYT_RS34745 -1.8 -0.6 hypothetical protein compare
BPHYT_RS03375 -1.8 -0.9 NAD(P) transhydrogenase compare
BPHYT_RS17905 -1.8 -1.5 fimbrial assembly family protein compare
BPHYT_RS21350 -1.8 -1.1 ADP-glucose pyrophosphorylase compare
BPHYT_RS06410 -1.8 -1.4 transcriptional regulator compare
BPHYT_RS11235 -1.8 -0.6 hypothetical protein compare
BPHYT_RS34300 -1.8 -3.0 major facilitator transporter compare
BPHYT_RS28150 -1.8 -2.9 methylmalonate-semialdehyde dehydrogenase compare
BPHYT_RS29750 -1.8 -1.2 phosphoenolpyruvate phosphomutase compare
BPHYT_RS29915 -1.8 -1.5 GntR family transcriptional regulator compare
BPHYT_RS28485 -1.8 -0.4 GntR family transcriptional regulator compare
BPHYT_RS29020 -1.8 -1.2 hypothetical protein compare
BPHYT_RS27405 -1.8 -1.5 aldehyde dehydrogenase compare
BPHYT_RS29005 -1.7 -1.7 transporter compare
BPHYT_RS09100 -1.7 -5.8 stationary phase survival protein SurE compare
BPHYT_RS26385 -1.7 -0.8 glutamine amidotransferase compare
BPHYT_RS22540 -1.7 -1.3 metal ABC transporter permease compare
BPHYT_RS26925 -1.7 -0.8 NIPSNAP family containing protein compare
BPHYT_RS11840 -1.7 -2.0 LysR family transcriptional regulator compare
BPHYT_RS06320 -1.7 -0.6 chemotaxis protein CheY compare
BPHYT_RS20745 -1.7 -2.7 ribose ABC transporter permease compare
BPHYT_RS20225 -1.7 -5.4 taurine catabolism dioxygenase tauD/tfdA compare
BPHYT_RS23740 -1.7 -2.5 AraC family transcriptional regulator compare
BPHYT_RS20070 -1.6 -0.7 hypothetical protein compare
BPHYT_RS03330 -1.6 -1.8 hypothetical protein compare
BPHYT_RS31905 -1.6 -1.1 hypothetical protein compare
BPHYT_RS26355 -1.6 -0.8 hypothetical protein compare
BPHYT_RS29740 -1.6 -2.9 2-aminoethylphosphonate aminotransferase compare
BPHYT_RS04595 -1.6 -1.0 cytoplasmic protein compare
BPHYT_RS02575 -1.6 -7.6 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS09465 -1.6 -0.9 transcriptional regulator compare
BPHYT_RS25780 -1.6 -0.4 DeoR faimly transcriptional regulator compare
BPHYT_RS16250 -1.6 -0.7 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS36360 -1.6 -1.5 hypothetical protein compare
BPHYT_RS02600 -1.6 -0.8 glutaredoxin compare
BPHYT_RS33580 -1.6 -2.0 geranyltranstransferase compare
BPHYT_RS01280 -1.6 -1.0 hypothetical protein compare
BPHYT_RS09890 -1.6 -2.1 choline dehydrogenase compare
BPHYT_RS32815 -1.6 -1.7 sugar ABC transporter compare
BPHYT_RS24540 -1.6 -1.7 DMSO reductase compare
BPHYT_RS07480 -1.6 -0.7 FAD-dependent oxidoreductase compare
BPHYT_RS05290 -1.6 -0.5 hypothetical protein compare
BPHYT_RS02415 -1.6 -2.9 cytochrome C550 compare
BPHYT_RS35800 -1.6 -1.9 TetR family transcriptional regulator compare
BPHYT_RS01625 -1.5 -1.4 chemotaxis protein CheY compare
BPHYT_RS32360 -1.5 -0.8 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS02570 -1.5 -4.6 phosphocarrier protein HPr compare
BPHYT_RS22205 -1.5 -1.6 hypothetical protein compare
BPHYT_RS12820 -1.5 -3.3 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS23170 -1.5 -1.1 XRE family transcriptional regulator compare
BPHYT_RS21070 -1.5 -1.5 ferredoxin compare
BPHYT_RS07660 -1.5 -1.1 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS26660 -1.5 -1.6 precorrin-4 C11-methyltransferase compare
BPHYT_RS36000 -1.5 -1.3 hypothetical protein compare
BPHYT_RS11155 -1.5 -0.6 hypothetical protein compare
BPHYT_RS29085 -1.5 -0.9 LysR family transcriptional regulator compare
BPHYT_RS07870 -1.5 -1.4 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
BPHYT_RS29950 -1.5 -0.8 hypothetical protein compare
BPHYT_RS22530 -1.5 -1.0 N5,N10-methylene tetrahydromethanopterin reductase compare
BPHYT_RS03830 -1.5 -1.4 hypothetical protein compare
BPHYT_RS23750 -1.5 -3.4 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS30775 -1.5 -1.0 gluconate 2-dehydrogenase compare
BPHYT_RS04430 -1.5 -0.9 amino acid ABC transporter ATPase compare
BPHYT_RS28285 -1.5 -1.0 MFS transporter compare
BPHYT_RS30610 -1.5 -1.1 major facilitator transporter compare
BPHYT_RS21045 -1.5 -1.5 bis(5'-nucleosyl)-tetraphosphatase compare
BPHYT_RS25515 -1.5 -0.9 glutathione S-transferase compare
BPHYT_RS04010 -1.5 -0.5 glycosyl transferase compare
BPHYT_RS17525 -1.5 -1.1 glutaredoxin compare
BPHYT_RS26200 -1.5 -1.6 acetate kinase compare
BPHYT_RS28945 -1.5 -1.5 endo-1,4-D-glucanase compare
BPHYT_RS35205 -1.4 -1.4 hypothetical protein compare
BPHYT_RS30990 -1.4 -0.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BPHYT_RS06120 -1.4 -2.4 heat-shock protein compare
BPHYT_RS35315 -1.4 -1.2 threonyl-tRNA synthetase compare
BPHYT_RS29520 -1.4 -0.5 hypothetical protein compare
BPHYT_RS06105 -1.4 -0.7 hypothetical protein compare
BPHYT_RS10630 -1.4 -2.1 oxidoreductase compare
BPHYT_RS15530 -1.4 -2.5 glutathione ABC transporter permease compare
BPHYT_RS07325 -1.4 -0.3 GntR family transcriptional regulator compare
BPHYT_RS14070 -1.4 -1.8 hypothetical protein compare
BPHYT_RS36130 -1.4 -0.7 hypothetical protein compare
BPHYT_RS10705 -1.4 -2.2 MFS transporter compare
BPHYT_RS23210 -1.4 -1.4 MFS transporter compare
BPHYT_RS28600 -1.4 -0.8 ArsC family transcriptional regulator compare
BPHYT_RS30140 -1.4 -0.5 3-methylitaconate isomerase compare
BPHYT_RS29840 -1.4 -0.7 polysaccharide biosynthesis protein compare
BPHYT_RS01950 -1.4 -2.8 phosphoheptose isomerase compare
BPHYT_RS24430 -1.4 -2.0 type VI secretion protein ImpA compare
BPHYT_RS21595 -1.3 -1.7 TetR family transcriptional regulator compare
BPHYT_RS20165 -1.3 -1.2 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BPHYT_RS35525 -1.3 -3.0 hypothetical protein compare
BPHYT_RS11310 -1.3 -0.8 LysR family transcriptional regulator compare
BPHYT_RS05650 -1.3 -0.8 hypothetical protein compare
BPHYT_RS02245 -1.3 -1.6 MerR family transcriptional regulator compare
BPHYT_RS05775 -1.3 -1.6 hypothetical protein compare
BPHYT_RS05645 -1.3 -2.7 hypothetical protein compare
BPHYT_RS30055 -1.3 -0.9 hypothetical protein compare
BPHYT_RS35530 -1.3 -1.1 arsenate reductase compare
BPHYT_RS20475 -1.3 -1.0 hypothetical protein compare
BPHYT_RS04325 -1.3 -2.8 acyltransferase 3 compare
BPHYT_RS06990 -1.3 -0.4 membrane protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments