Experiment set39S342 for Burkholderia phytofirmans PsJN

200 most detrimental genes:

gene	name	fitness	t score	description
BPHYT_RS11705		+4.5	2.9	hypothetical protein
BPHYT_RS19570		+4.1	33.4	sodium/hydrogen exchanger
BPHYT_RS19565		+4.1	21.1	gamma-glutamyl:cysteine ligase
BPHYT_RS09500		+3.6	15.9	glucose-6-phosphate isomerase
BPHYT_RS06175		+3.3	9.2	LPS biosynthesis
BPHYT_RS33820		+3.3	30.2	histidine kinase
BPHYT_RS12985		+2.9	3.0	amino acid acetyltransferase
BPHYT_RS16710		+2.9	1.2	LysR family transcriptional regulator
BPHYT_RS02595		+2.8	3.2	sulfurtransferase
BPHYT_RS23910		+2.6	10.5	phosphoribosyl-dephospho-CoA transferase
BPHYT_RS27890		+2.6	1.3	hypothetical protein
BPHYT_RS18655		+2.6	11.8	3-oxoacyl-ACP synthase
BPHYT_RS33920		+2.6	16.0	type II citrate synthase
BPHYT_RS05575		+2.6	21.0	Fis family transcriptional regulator
BPHYT_RS12845		+2.4	18.3	ATPase
BPHYT_RS03455		+2.4	5.5	paraquat-inducible protein A
BPHYT_RS25935		+2.4	1.8	type III secretion protein
BPHYT_RS05610		+2.3	12.5	DNA-cytosine methyltransferase
BPHYT_RS14395		+2.3	10.4	sugar dehydratase
BPHYT_RS14140		+2.3	3.6	phosphate transporter permease subunit PstC
BPHYT_RS14400		+2.3	6.7	anti-sigma factor
BPHYT_RS02905		+2.2	19.1	RNA polymerase subunit sigma-54
BPHYT_RS04945		+2.2	17.0	membrane protein
BPHYT_RS05560		+2.2	12.3	Fis family transcriptional regulator
BPHYT_RS08850		+2.2	0.9	transcriptional regulator
BPHYT_RS14855		+2.1	0.8	ADP-L-glycero-D-manno-heptose-6-epimerase
BPHYT_RS06530		+2.1	2.7	membrane protein
BPHYT_RS09280		+2.1	1.5	pyridoxal-5'-phosphate-dependent protein subunit beta
BPHYT_RS12465		+2.1	3.6	inositol monophosphatase
BPHYT_RS05155		+2.0	8.6	acetyltransferase GCN5
BPHYT_RS06975		+2.0	2.0	glutamate racemase
BPHYT_RS02435		+2.0	1.7	hypothetical protein
BPHYT_RS06985		+2.0	6.9	fumarate hydratase
BPHYT_RS08130		+2.0	2.4	transposase
BPHYT_RS09330		+2.0	16.6	phytoene synthase
BPHYT_RS13645		+1.9	15.4	threonine--tRNA ligase
BPHYT_RS04950		+1.9	12.8	hypothetical protein
BPHYT_RS12725		+1.9	15.8	regulator
BPHYT_RS17240		+1.9	0.9	cell division protein FtsW
BPHYT_RS05615		+1.9	1.5	hypothetical protein
BPHYT_RS32860		+1.9	1.5	hypothetical protein
BPHYT_RS06075		+1.9	14.9	hypothetical protein
BPHYT_RS12900		+1.9	1.7	transposase
BPHYT_RS05670		+1.8	3.5	hypothetical protein
BPHYT_RS25210		+1.8	2.1	drug:proton antiporter
BPHYT_RS05590		+1.8	11.1	trehalose-6-phosphate synthase
BPHYT_RS33150		+1.7	1.8	beta-lactamase
BPHYT_RS20665		+1.7	1.0	LysR family transcriptional regulator
BPHYT_RS09815		+1.7	1.8	malate synthase
BPHYT_RS34185		+1.7	4.3	cold-shock protein
BPHYT_RS20095		+1.6	1.5	transcriptional regulator
BPHYT_RS12150		+1.6	11.1	PII uridylyl-transferase
BPHYT_RS31615		+1.6	1.6	thiamine pyrophosphate protein
BPHYT_RS16335		+1.6	3.8	membrane protein
BPHYT_RS09660		+1.6	7.8	trehalose-6-phosphate synthase
BPHYT_RS25870		+1.6	1.1	type III secretion system ATPase
BPHYT_RS32495		+1.6	3.1	ABC transporter
BPHYT_RS13200		+1.6	2.5	molybdopterin binding oxidoreductase
BPHYT_RS28670		+1.6	1.6	MFS transporter
BPHYT_RS27330		+1.5	1.8	hypothetical protein
BPHYT_RS03620		+1.5	6.9	poly(A) polymerase
BPHYT_RS07140		+1.5	1.5	hypothetical protein
BPHYT_RS26930		+1.5	7.4	mechanosensitive ion channel protein
BPHYT_RS12290		+1.5	2.8	universal stress protein UspA
BPHYT_RS08415		+1.5	1.8	hypothetical protein
BPHYT_RS21475		+1.5	1.4	hypothetical protein
BPHYT_RS01455		+1.5	1.4	peptide deformylase
BPHYT_RS10320		+1.5	3.4	hypothetical protein
BPHYT_RS11170		+1.4	0.9	hypothetical protein
BPHYT_RS04290		+1.4	0.6	glycosyl transferase family 2
BPHYT_RS02865		+1.4	0.9	hypothetical protein
BPHYT_RS20060		+1.4	1.4	hypothetical protein
BPHYT_RS04940		+1.4	2.0	hypothetical protein
BPHYT_RS14145		+1.4	6.7	phosphate ABC transporter substrate-binding protein
BPHYT_RS05025		+1.4	1.2	sugar ABC transporter substrate-binding protein
BPHYT_RS11815		+1.4	1.4	alcohol dehydrogenase
BPHYT_RS12635		+1.4	3.0	translation factor Sua5
BPHYT_RS06190		+1.4	1.2	heptosyltransferase
BPHYT_RS02640		+1.4	8.7	cytochrome C oxidase
BPHYT_RS03505		+1.4	1.8	FAD-binding protein
BPHYT_RS04385		+1.4	2.3	nucleoside-diphosphate sugar oxidoreductase
BPHYT_RS03625		+1.3	5.0	Histidinol-phosphatase (EC:3.1.3.15) (from data)
BPHYT_RS04285		+1.3	0.5	rhamnosyltransferase
BPHYT_RS04315		+1.3	6.1	UDP-N-acetylglucosamine 2-epimerase
BPHYT_RS17545		+1.3	5.0	cold-shock protein
BPHYT_RS34920		+1.3	2.1	IclR family transcriptional regulator
BPHYT_RS16390		+1.3	3.8	MarR family transcriptional regulator
BPHYT_RS06195		+1.3	1.4	membrane protein
BPHYT_RS25095		+1.3	1.6	AraC family transcriptional regulator
BPHYT_RS09640		+1.3	5.4	DNAase
BPHYT_RS05320		+1.3	1.4	beta-lactamase
BPHYT_RS16290		+1.3	1.7	hypothetical protein
BPHYT_RS30860		+1.3	2.3	sugar ABC transporter permease
BPHYT_RS34445		+1.3	2.6	GntR family transcriptional regulator
BPHYT_RS16345		+1.3	3.1	succinyl-CoA ligase [ADP-forming] subunit beta
BPHYT_RS29410		+1.3	4.6	HPr kinase
BPHYT_RS26570		+1.3	1.1	5'-nucleotidase
BPHYT_RS35215		+1.3	1.5	dehydrogenase
BPHYT_RS22230		+1.3	1.8	LuxR family transcriptional regulator
BPHYT_RS14340		+1.3	8.0	Fis family transcriptional regulator
BPHYT_RS07840		+1.3	1.0	muconate cycloisomerase
BPHYT_RS07515		+1.3	1.5	photosystem reaction center subunit H
BPHYT_RS05850		+1.2	2.2	hypothetical protein
BPHYT_RS16175		+1.2	0.6	hemolysin D
BPHYT_RS07255		+1.2	2.4	4-oxalocrotonate decarboxylase
BPHYT_RS32365		+1.2	3.0	branched-chain amino acid ABC transporter substrate-binding protein
BPHYT_RS33615		+1.2	1.9	decarboxylase
BPHYT_RS02650		+1.2	2.6	membrane protein
BPHYT_RS27580		+1.2	2.0	F0F1 ATP synthase subunit alpha
BPHYT_RS14485		+1.2	2.2	ribonuclease E
BPHYT_RS25280		+1.2	2.9	diguanylate cyclase
BPHYT_RS11825		+1.2	0.8	cytosine deaminase
BPHYT_RS04300		+1.2	6.7	family 2 glycosyl transferase
BPHYT_RS17035		+1.2	1.0	sugar kinase
BPHYT_RS19920		+1.2	1.3	peptidyl-prolyl cis-trans isomerase
BPHYT_RS04350		+1.2	6.0	membrane protein
BPHYT_RS14845		+1.2	0.6	cysteine synthase
BPHYT_RS33810		+1.2	2.2	membrane protein
BPHYT_RS18965		+1.2	1.6	chemotaxis protein CheY
BPHYT_RS03450		+1.2	5.3	paraquat-inducible protein A
BPHYT_RS16840		+1.2	2.1	transketolase
BPHYT_RS14895		+1.2	1.3	3-phosphoshikimate 1-carboxyvinyltransferase
BPHYT_RS07215		+1.2	1.9	LysR family transcriptional regulator
BPHYT_RS28860		+1.2	1.0	haloacid dehalogenase
BPHYT_RS06070		+1.1	8.2	cytochrome C
BPHYT_RS09445		+1.1	2.0	trigger factor
BPHYT_RS06065		+1.1	4.6	cytochrome C
BPHYT_RS02635		+1.1	5.7	membrane protein
BPHYT_RS20155		+1.1	0.9	hypothetical protein
BPHYT_RS14135		+1.1	2.2	phosphate transporter permease subunit PtsA
BPHYT_RS02410		+1.1	1.6	alpha/beta hydrolase
BPHYT_RS09160		+1.1	4.7	polyhydroxyalkanoate synthesis repressor PhaR
BPHYT_RS00295		+1.1	2.7	hypothetical protein
BPHYT_RS23455		+1.1	0.9	phosphorylase
BPHYT_RS16060		+1.1	1.3	ribonucleotide-diphosphate reductase subunit alpha
BPHYT_RS02300		+1.1	1.1	acid shock protein
BPHYT_RS08880		+1.1	4.7	phosphate transport regulator
BPHYT_RS24135		+1.1	2.4	alpha-dehydro-beta-deoxy-D-glucarate aldolase
BPHYT_RS34770		+1.1	1.4	chemotaxis protein
BPHYT_RS26135		+1.1	0.8	ABC transporter permease
BPHYT_RS08405		+1.1	1.4	hypothetical protein
BPHYT_RS08340		+1.1	1.7	chemotaxis protein CheY
BPHYT_RS03460		+1.1	4.3	mammalian cell entry protein
BPHYT_RS02505		+1.1	2.8	spermidine/putrescine ABC transporter ATPase
BPHYT_RS09145		+1.1	5.6	poly-beta-hydroxybutyrate polymerase
BPHYT_RS16340		+1.1	3.7	succinyl-CoA synthetase subunit alpha
BPHYT_RS15290		+1.1	2.0	tRNA-Arg
BPHYT_RS33390		+1.1	1.5	phosphate ABC transporter substrate-binding protein
BPHYT_RS25955		+1.1	1.0	transcriptional regulator
BPHYT_RS08825		+1.1	1.6	tartronate semialdehyde reductase
BPHYT_RS13110		+1.1	3.2	ABC transporter substrate-binding protein
BPHYT_RS30280		+1.1	2.2	hypothetical protein
BPHYT_RS34490		+1.1	0.7	hypothetical protein
BPHYT_RS09585		+1.1	0.5	hypothetical protein
BPHYT_RS17750		+1.1	7.4	VacJ family lipoprotein
BPHYT_RS11040		+1.1	1.4	GntR family transcriptional regulator
BPHYT_RS24640		+1.1	2.0	alcohol dehydrogenase
BPHYT_RS26025		+1.1	0.5	hypothetical protein
BPHYT_RS22580		+1.0	2.4	transcriptional regulator
BPHYT_RS05570		+1.0	2.9	hypothetical protein
BPHYT_RS31395		+1.0	2.8	thiamine pyrophosphate-binding protein
BPHYT_RS36340		+1.0	2.0	hypothetical protein
BPHYT_RS17825		+1.0	3.5	transcriptional regulator
BPHYT_RS35770		+1.0	1.0	glyoxalase
BPHYT_RS14130		+1.0	2.6	phosphate ABC transporter ATP-binding protein
BPHYT_RS02005		+1.0	1.4	diguanylate phosphodiesterase
BPHYT_RS20630		+1.0	1.7	patatin
BPHYT_RS08945		+1.0	3.1	hypothetical protein
BPHYT_RS05585		+1.0	3.2	hypothetical protein
BPHYT_RS22455		+1.0	0.6	phosphonate ABC transporter substrate-binding protein
BPHYT_RS34485		+1.0	1.6	diguanylate phosphodiesterase
BPHYT_RS05780		+1.0	2.8	hypothetical protein
BPHYT_RS21415		+1.0	1.8	3-oxoadipate CoA-transferase subunit A
BPHYT_RS11640		+1.0	1.7	hypothetical protein
BPHYT_RS12615		+1.0	0.4	dihydrodipicolinate synthase
BPHYT_RS27495		+1.0	0.6	hypothetical protein
BPHYT_RS33125		+1.0	1.9	hypothetical protein
BPHYT_RS05795		+1.0	1.6	hypothetical protein
BPHYT_RS29035		+1.0	1.1	arsenic transporter
BPHYT_RS09270		+1.0	5.7	histidine kinase
BPHYT_RS06305		+1.0	2.3	small mechanosensitive ion channel protein MscS
BPHYT_RS08510		+1.0	1.6	acyl-CoA dehydrogenase
BPHYT_RS17640		+1.0	0.6	2-alkenal reductase
BPHYT_RS34495		+1.0	1.9	phenol degradation protein meta
BPHYT_RS01620		+1.0	4.1	sensor histidine kinase
BPHYT_RS13885		+1.0	0.9	myo-inositol 2-dehydrogenase
BPHYT_RS33695		+1.0	1.4	molybdenum ABC transporter ATPase
BPHYT_RS28065		+1.0	0.7	hypothetical protein
BPHYT_RS07835		+1.0	1.2	muconolactone delta-isomerase
BPHYT_RS15865		+1.0	1.0	exodeoxyribonuclease VII large subunit
BPHYT_RS05010		+1.0	1.8	RpiR family transcriptional regulator
BPHYT_RS02010		+1.0	1.9	copper homeostasis protein CutC
BPHYT_RS19770		+1.0	2.8	ArsR family transcriptional regulator
BPHYT_RS02665		+1.0	6.3	MFS transporter
BPHYT_RS09645		+1.0	1.2	ankyrin
BPHYT_RS11755		+1.0	2.0	spermidine/putrescine ABC transporter substrate-binding protein
BPHYT_RS10950		+1.0	1.9	transcriptional regulator
BPHYT_RS00895		+1.0	1.9	MFS transporter
BPHYT_RS02525		+1.0	5.1	membrane protein
BPHYT_RS29090		+1.0	2.4	oxidoreductase

Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments