Experiment set39S337 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO1 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS19985 -3.6 -1.1 CoA-transferase compare
BPHYT_RS33805 -3.5 -1.1 hypothetical protein compare
BPHYT_RS21625 -3.1 -1.0 LysR family transcriptional regulator compare
BPHYT_RS34490 -3.0 -0.9 hypothetical protein compare
BPHYT_RS04010 -3.0 -0.9 glycosyl transferase compare
BPHYT_RS29520 -2.9 -0.9 hypothetical protein compare
BPHYT_RS12510 -2.9 -1.5 RNA-binding protein compare
BPHYT_RS00690 -2.8 -0.9 transcriptional regulator compare
BPHYT_RS34810 -2.8 -2.3 RND transporter compare
BPHYT_RS31050 -2.7 -0.9 epimerase compare
BPHYT_RS14920 -2.6 -2.2 hypothetical protein compare
BPHYT_RS16065 -2.4 -0.8 LacI family transcriptional regulator compare
BPHYT_RS21485 -2.4 -1.0 hypothetical protein compare
BPHYT_RS29810 -2.4 -1.0 hexapeptide transferase compare
BPHYT_RS05895 -2.3 -1.0 hypothetical protein compare
BPHYT_RS03655 -2.3 -1.0 membrane protein compare
BPHYT_RS01975 -2.3 -1.2 hypothetical protein compare
BPHYT_RS33765 -2.3 -0.7 membrane protein compare
BPHYT_RS11125 -2.3 -1.0 alkylhydroperoxidase compare
BPHYT_RS10115 -2.2 -1.5 hypothetical protein compare
BPHYT_RS08645 -2.2 -1.3 sulfonate ABC transporter compare
BPHYT_RS36525 -2.2 -1.2 hypothetical protein compare
BPHYT_RS25335 -2.2 -0.7 hypothetical protein compare
BPHYT_RS08235 -2.1 -0.6 nucleoprotein, Hfg, host factor I compare
BPHYT_RS30040 -2.1 -0.9 hypothetical protein compare
BPHYT_RS18660 -2.1 -1.5 hypothetical protein compare
BPHYT_RS33360 -2.1 -1.9 formyl-CoA transferase compare
BPHYT_RS35205 -2.1 -1.9 hypothetical protein compare
BPHYT_RS11150 -2.0 -1.4 LysR family transcriptional regulator compare
BPHYT_RS07095 -2.0 -1.4 LysR family transcriptional regulator compare
BPHYT_RS03280 -2.0 -0.9 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS26135 -2.0 -0.9 ABC transporter permease compare
BPHYT_RS12060 -2.0 -1.0 hypothetical protein compare
BPHYT_RS22910 -2.0 -0.6 hypothetical protein compare
BPHYT_RS24590 -1.9 -0.8 DeoR faimly transcriptional regulator compare
BPHYT_RS23315 -1.9 -1.0 hypothetical protein compare
BPHYT_RS06550 -1.9 -1.3 acetolactate synthase compare
BPHYT_RS17745 -1.9 -6.0 toluene tolerance family protein compare
BPHYT_RS09000 -1.9 -0.8 competence protein ComE compare
BPHYT_RS02570 -1.8 -5.9 phosphocarrier protein HPr compare
BPHYT_RS28600 -1.8 -1.1 ArsC family transcriptional regulator compare
BPHYT_RS17395 -1.8 -1.6 anthranilate synthase subunit II compare
BPHYT_RS26925 -1.8 -1.1 NIPSNAP family containing protein compare
BPHYT_RS35245 -1.8 -2.4 hypothetical protein compare
BPHYT_RS09655 -1.8 -4.2 mechanosensitive ion channel protein MscS compare
BPHYT_RS18610 -1.8 -3.7 lytic transglycosylase compare
BPHYT_RS28485 -1.8 -0.5 GntR family transcriptional regulator compare
BPHYT_RS31700 -1.8 -2.7 porin compare
BPHYT_RS12615 -1.7 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS20245 -1.7 -3.8 iron ABC transporter substrate-binding protein compare
BPHYT_RS09870 -1.7 -2.1 membrane protein compare
BPHYT_RS25875 -1.7 -0.7 type III secretion protein compare
BPHYT_RS25500 -1.7 -1.1 hypothetical protein compare
BPHYT_RS25080 -1.7 -1.0 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS19545 -1.6 -2.2 nuclear protein SET compare
BPHYT_RS14180 -1.6 -1.1 membrane protein compare
BPHYT_RS12820 -1.6 -4.7 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS01095 -1.6 -1.0 hypothetical protein compare
BPHYT_RS01625 -1.6 -1.5 chemotaxis protein CheY compare
BPHYT_RS25705 -1.6 -1.7 aldehyde dehydrogenase compare
BPHYT_RS10065 -1.6 -0.8 cytochrome C oxidase subunit I compare
BPHYT_RS27505 -1.6 -1.8 hypothetical protein compare
BPHYT_RS22930 -1.6 -0.7 type II secretion system protein compare
BPHYT_RS21770 -1.5 -1.5 aldehyde dehydrogenase compare
BPHYT_RS20235 -1.5 -3.0 iron ABC transporter compare
BPHYT_RS00980 -1.5 -0.6 GCN5 family acetyltransferase compare
BPHYT_RS26470 -1.5 -0.6 MFS transporter compare
BPHYT_RS23395 -1.5 -1.1 glycosyl transferase compare
BPHYT_RS05650 -1.5 -1.1 hypothetical protein compare
BPHYT_RS28305 -1.5 -0.8 protein tyrosine phosphatase compare
BPHYT_RS28280 -1.5 -1.1 hypothetical protein compare
BPHYT_RS20590 -1.5 -1.8 methionine sulfoxide reductase A compare
BPHYT_RS12670 -1.5 -1.9 cell division protein FtsB compare
BPHYT_RS21170 -1.5 -1.3 LysR family transcriptional regulator compare
BPHYT_RS11810 -1.5 -1.4 LysR family transcriptional regulator compare
BPHYT_RS17240 -1.5 -0.4 cell division protein FtsW compare
BPHYT_RS31495 -1.5 -2.2 transposase compare
BPHYT_RS07595 -1.4 -1.2 membrane protein compare
BPHYT_RS02285 -1.4 -4.0 cell division protein compare
BPHYT_RS34780 -1.4 -2.1 phytoene synthase compare
BPHYT_RS08995 -1.4 -0.6 hypothetical protein compare
BPHYT_RS33690 -1.4 -1.5 molybdate ABC transporter permease compare
BPHYT_RS14840 -1.4 -4.9 lytic transglycosylase compare
BPHYT_RS07325 -1.4 -0.4 GntR family transcriptional regulator compare
BPHYT_RS14245 -1.4 -0.6 membrane protein compare
BPHYT_RS25815 -1.4 -1.2 deoxyribose-phosphate aldolase compare
BPHYT_RS33845 -1.4 -0.9 bacteriocin production protein compare
BPHYT_RS17760 -1.4 -5.0 ABC transporter permease compare
BPHYT_RS19945 -1.4 -1.8 hypothetical protein compare
BPHYT_RS12280 -1.4 -0.8 RNA helicase compare
BPHYT_RS12785 -1.4 -1.4 Rrf2 family transcriptional regulator compare
BPHYT_RS22940 -1.4 -1.0 pilus assembly protein TadE compare
BPHYT_RS34760 -1.4 -3.1 sensor histidine kinase compare
BPHYT_RS10650 -1.4 -0.7 membrane protein compare
BPHYT_RS13705 -1.3 -1.9 chorismate synthase compare
BPHYT_RS21940 -1.3 -1.9 hemolysin D compare
BPHYT_RS06990 -1.3 -0.6 membrane protein compare
BPHYT_RS29850 -1.3 -0.8 protein tyrosine kinase compare
BPHYT_RS31805 -1.3 -2.3 beta-lactamase compare
BPHYT_RS09100 -1.3 -3.1 stationary phase survival protein SurE compare
BPHYT_RS06710 -1.3 -0.7 hypothetical protein compare
BPHYT_RS21235 -1.3 -3.1 hypothetical protein compare
BPHYT_RS08335 -1.3 -0.7 hypothetical protein compare
BPHYT_RS33460 -1.3 -0.7 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS26990 -1.3 -2.1 GntR family transcriptional regulator compare
BPHYT_RS06790 -1.3 -5.2 hypothetical protein compare
BPHYT_RS25370 -1.3 -0.9 acyl-CoA dehydrogenase compare
BPHYT_RS03170 -1.3 -0.7 membrane protein compare
BPHYT_RS28480 -1.3 -1.7 hydroxyglutarate oxidase compare
BPHYT_RS23445 -1.3 -1.2 hexuronate transporter compare
BPHYT_RS17905 -1.3 -1.4 fimbrial assembly family protein compare
BPHYT_RS24670 -1.3 -1.6 ABC transporter permease compare
BPHYT_RS28885 -1.3 -0.9 betaine-aldehyde dehydrogenase compare
BPHYT_RS10240 -1.3 -0.7 translation initiation inhibitor compare
BPHYT_RS21350 -1.3 -1.2 ADP-glucose pyrophosphorylase compare
BPHYT_RS31950 -1.3 -1.5 short-chain dehydrogenase compare
BPHYT_RS11745 -1.3 -0.7 (2Fe-2S)-binding protein compare
BPHYT_RS17765 -1.2 -4.6 toluene ABC transporter ATP-binding protein compare
BPHYT_RS36365 -1.2 -0.8 hypothetical protein compare
BPHYT_RS31890 -1.2 -1.1 transposase compare
BPHYT_RS21615 -1.2 -1.3 FMN-dependent NADH-azoreductase compare
BPHYT_RS23460 -1.2 -0.5 AraC family transcriptional regulator compare
BPHYT_RS17625 -1.2 -8.5 cytochrome B compare
BPHYT_RS32340 -1.2 -1.4 LrgA family protein compare
BPHYT_RS24315 -1.2 -0.8 phosphoribosyltransferase compare
BPHYT_RS30775 -1.2 -1.0 gluconate 2-dehydrogenase compare
BPHYT_RS02575 -1.2 -6.7 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS31545 -1.2 -1.9 membrane protein compare
BPHYT_RS16195 -1.2 -2.2 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS05405 -1.2 -1.7 GCN5 family acetyltransferase compare
BPHYT_RS30795 -1.2 -1.0 short-chain dehydrogenase compare
BPHYT_RS10925 -1.2 -1.5 aldehyde dehydrogenase compare
BPHYT_RS18705 -1.2 -1.0 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS11335 -1.2 -1.1 hypothetical protein compare
BPHYT_RS05825 -1.2 -1.2 hypothetical protein compare
BPHYT_RS01945 -1.2 -2.3 hypothetical protein compare
BPHYT_RS09765 -1.2 -1.7 G-D-S-L family lipolytic protein compare
BPHYT_RS21255 -1.2 -3.0 spermidine/putrescine ABC transporter ATP-binding protein compare
BPHYT_RS33155 -1.2 -1.4 hypothetical protein compare
BPHYT_RS07480 -1.2 -0.7 FAD-dependent oxidoreductase compare
BPHYT_RS04330 -1.2 -5.6 hypothetical protein compare
BPHYT_RS20015 -1.1 -1.7 MFS transporter compare
BPHYT_RS11155 -1.1 -0.7 hypothetical protein compare
BPHYT_RS10475 -1.1 -1.0 mammalian cell entry protein compare
BPHYT_RS13390 -1.1 -0.6 IclR family transcriptional regulator compare
BPHYT_RS13565 -1.1 -1.3 bacterioferritin compare
BPHYT_RS34410 -1.1 -1.0 hypothetical protein compare
BPHYT_RS21905 -1.1 -0.5 IclR family transcriptional regulator compare
BPHYT_RS26355 -1.1 -0.8 hypothetical protein compare
BPHYT_RS10390 -1.1 -2.0 nitrate ABC transporter substrate-binding protein compare
BPHYT_RS00770 -1.1 -0.9 conjugal transfer protein TraC compare
BPHYT_RS29640 -1.1 -2.2 NAD-dependent deacetylase compare
BPHYT_RS11765 -1.1 -0.5 polyamine ABC transporter permease compare
BPHYT_RS30825 -1.1 -1.2 extradiol dioxygenase compare
BPHYT_RS33060 -1.1 -1.2 hypothetical protein compare
BPHYT_RS26540 -1.1 -0.9 hypothetical protein compare
BPHYT_RS29015 -1.1 -0.9 RND transporter compare
BPHYT_RS08165 -1.1 -1.0 pilus assembly protein TadE compare
BPHYT_RS18760 -1.1 -0.9 flagellar biosynthesis protein FliT compare
BPHYT_RS34235 -1.1 -1.3 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) compare
BPHYT_RS28920 -1.1 -0.7 cellulose synthase compare
BPHYT_RS23265 -1.1 -2.5 methylcrotonoyl-CoA carboxylase compare
BPHYT_RS25135 -1.1 -1.1 hypothetical protein compare
BPHYT_RS05565 -1.1 -1.0 membrane protein compare
BPHYT_RS34655 -1.1 -0.8 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS13935 -1.1 -0.5 mannosyltransferase compare
BPHYT_RS22100 -1.1 -2.8 ribonuclease BN compare
BPHYT_RS23230 -1.0 -1.3 histidine kinase compare
BPHYT_RS23730 -1.0 -1.8 multidrug DMT transporter permease compare
BPHYT_RS23525 -1.0 -0.6 hypothetical protein compare
BPHYT_RS03255 -1.0 -1.7 glutathione S-transferase compare
BPHYT_RS35675 -1.0 -1.4 short-chain dehydrogenase compare
BPHYT_RS28630 -1.0 -1.3 IclR family transcriptional regulator compare
BPHYT_RS02760 -1.0 -0.6 cytochrome BD oxidase subunit II compare
BPHYT_RS06105 -1.0 -0.8 hypothetical protein compare
BPHYT_RS22370 -1.0 -2.8 alpha/beta hydrolase compare
BPHYT_RS15915 -1.0 -5.4 ornithine carbamoyltransferase compare
BPHYT_RS20225 -1.0 -3.8 taurine catabolism dioxygenase tauD/tfdA compare
BPHYT_RS10125 -1.0 -0.8 hypothetical protein compare
BPHYT_RS29420 -1.0 -1.6 GntR family transcriptional regulator compare
BPHYT_RS31400 -1.0 -0.8 methyl-accepting chemotaxis protein compare
BPHYT_RS02245 -1.0 -2.0 MerR family transcriptional regulator compare
BPHYT_RS17620 -1.0 -4.8 cytochrome C compare
BPHYT_RS11050 -1.0 -1.0 molecular chaperone compare
BPHYT_RS31690 -1.0 -2.0 hypothetical protein compare
BPHYT_RS25545 -1.0 -2.0 hypothetical protein compare
BPHYT_RS27410 -1.0 -0.9 amidohydrolase compare
BPHYT_RS07165 -1.0 -0.9 peptide ABC transporter permease compare
BPHYT_RS27860 -1.0 -0.8 membrane protein compare
BPHYT_RS16215 -1.0 -2.8 sensor histidine kinase compare
BPHYT_RS20920 -1.0 -1.6 oxidoreductase compare
BPHYT_RS21470 -1.0 -0.9 6-hydroxynicotinate reductase compare
BPHYT_RS20865 -1.0 -1.1 2-hydroxyacid dehydrogenase compare
BPHYT_RS14605 -1.0 -1.5 sodium transporter compare
BPHYT_RS30375 -1.0 -2.3 hypothetical protein compare
BPHYT_RS23675 -1.0 -0.8 lysine transporter LysE compare
BPHYT_RS30055 -0.9 -1.0 hypothetical protein compare
BPHYT_RS14060 -0.9 -0.8 peptidase M23 compare
BPHYT_RS22885 -0.9 -1.5 hypothetical protein compare
BPHYT_RS04865 -0.9 -0.9 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments