Experiment set39S336 for Burkholderia phytofirmans PsJN

Compare to:

36hr PHYTO1 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS36525 -4.0 -1.4 hypothetical protein compare
BPHYT_RS23445 -3.9 -2.3 hexuronate transporter compare
BPHYT_RS33805 -3.4 -1.2 hypothetical protein compare
BPHYT_RS06710 -3.4 -1.2 hypothetical protein compare
BPHYT_RS13390 -3.2 -1.2 IclR family transcriptional regulator compare
BPHYT_RS26185 -3.2 -1.2 thioesterase compare
BPHYT_RS28575 -3.2 -1.1 transcriptional regulator compare
BPHYT_RS23350 -3.1 -2.7 NAD-dependent epimerase/dehydratase compare
BPHYT_RS22260 -3.0 -1.5 hypothetical protein compare
BPHYT_RS29085 -3.0 -1.9 LysR family transcriptional regulator compare
BPHYT_RS34490 -3.0 -1.1 hypothetical protein compare
BPHYT_RS09690 -2.9 -1.5 phosphate starvation-inducible protein PsiF compare
BPHYT_RS13450 -2.9 -1.5 GntR family transcriptional regulator compare
BPHYT_RS10095 -2.8 -1.7 integrase compare
BPHYT_RS26490 -2.8 -1.0 hypothetical protein compare
BPHYT_RS28300 -2.8 -1.0 histone nucleoid-structuring protein H-NS compare
BPHYT_RS26115 -2.8 -2.0 polysaccharide deacetylase compare
BPHYT_RS32395 -2.7 -1.0 hypothetical protein compare
BPHYT_RS25270 -2.7 -2.3 multidrug MFS transporter compare
BPHYT_RS06350 -2.7 -1.6 chemotaxis protein CheY compare
BPHYT_RS09465 -2.7 -1.7 transcriptional regulator compare
BPHYT_RS09860 -2.7 -0.9 pilus assembly protein PilP compare
BPHYT_RS31050 -2.7 -0.9 epimerase compare
BPHYT_RS12535 -2.6 -0.9 membrane protein compare
BPHYT_RS19610 -2.6 -1.3 general secretion pathway protein GspC compare
BPHYT_RS02130 -2.6 -2.2 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS19905 -2.5 -1.6 membrane protein compare
BPHYT_RS25500 -2.5 -1.5 hypothetical protein compare
BPHYT_RS23650 -2.4 -0.9 hypothetical protein compare
BPHYT_RS26355 -2.4 -1.2 hypothetical protein compare
BPHYT_RS22815 -2.4 -1.8 TonB-denpendent receptor compare
BPHYT_RS05620 -2.4 -1.2 CsbD family protein compare
BPHYT_RS16555 -2.3 -2.4 cation transporter compare
BPHYT_RS14060 -2.2 -1.4 peptidase M23 compare
BPHYT_RS11635 -2.2 -0.8 RNA polymerase subunit sigma-24 compare
BPHYT_RS02765 -2.2 -1.3 cytochrome BD oxidase subunit I compare
BPHYT_RS04890 -2.2 -1.0 cobalamin biosynthesis protein CobD compare
BPHYT_RS02180 -2.1 -1.8 hypothetical protein compare
BPHYT_RS25335 -2.1 -0.7 hypothetical protein compare
BPHYT_RS13320 -2.0 -1.0 allantoate amidohydrolase compare
BPHYT_RS34080 -2.0 -2.4 flagellar motor protein MotB compare
BPHYT_RS25015 -2.0 -2.8 XRE family transcriptional regulator compare
BPHYT_RS05065 -2.0 -2.4 DNA mismatch repair protein MutS compare
BPHYT_RS10005 -1.9 -0.9 hypothetical protein compare
BPHYT_RS01485 -1.9 -1.2 histidine kinase compare
BPHYT_RS28245 -1.9 -1.4 MFS transporter compare
BPHYT_RS34260 -1.9 -2.1 hypothetical protein compare
BPHYT_RS09355 -1.9 -1.5 LysR family transcriptional regulator compare
BPHYT_RS31305 -1.9 -1.8 alcohol dehydrogenase compare
BPHYT_RS20900 -1.9 -1.8 phytanoyl-CoA dioxygenase compare
BPHYT_RS02760 -1.9 -0.9 cytochrome BD oxidase subunit II compare
BPHYT_RS23155 -1.9 -1.2 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS22910 -1.9 -0.6 hypothetical protein compare
BPHYT_RS05565 -1.9 -1.6 membrane protein compare
BPHYT_RS31830 -1.9 -2.0 hypothetical protein compare
BPHYT_RS22360 -1.9 -1.0 response regulator receiver compare
BPHYT_RS29745 -1.8 -1.9 phosphonopyruvate decarboxylase compare
BPHYT_RS02365 -1.8 -1.3 hypothetical protein compare
BPHYT_RS24955 -1.8 -1.9 cytochrome C peroxidase compare
BPHYT_RS19945 -1.7 -2.4 hypothetical protein compare
BPHYT_RS28485 -1.7 -0.6 GntR family transcriptional regulator compare
BPHYT_RS28365 -1.7 -1.1 Germin subfamily 1 member 15 compare
BPHYT_RS07760 -1.7 -1.4 diguanylate phosphodiesterase compare
BPHYT_RS28675 -1.7 -3.2 hypothetical protein compare
BPHYT_RS14180 -1.7 -1.1 membrane protein compare
BPHYT_RS31125 -1.7 -1.9 hypothetical protein compare
BPHYT_RS11970 -1.7 -1.0 cupin compare
BPHYT_RS04330 -1.6 -6.6 hypothetical protein compare
BPHYT_RS07660 -1.6 -1.5 sulfonate ABC transporter substrate-binding protein compare
BPHYT_RS24590 -1.6 -0.8 DeoR faimly transcriptional regulator compare
BPHYT_RS35235 -1.6 -1.7 amino acid transporter compare
BPHYT_RS09385 -1.6 -1.0 FAD-dependent oxidoreductase compare
BPHYT_RS02570 -1.6 -6.3 phosphocarrier protein HPr compare
BPHYT_RS01950 -1.6 -3.8 phosphoheptose isomerase compare
BPHYT_RS30725 -1.6 -1.4 hypothetical protein compare
BPHYT_RS21530 -1.5 -1.5 RNA polymerase subunit sigma-24 compare
BPHYT_RS35535 -1.5 -2.5 arsenic transporter compare
BPHYT_RS13160 -1.5 -0.9 membrane protein compare
BPHYT_RS25780 -1.5 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS26880 -1.5 -1.3 ketosteroid isomerase compare
BPHYT_RS01975 -1.5 -1.1 hypothetical protein compare
BPHYT_RS13900 -1.5 -1.6 ATPase compare
BPHYT_RS10175 -1.5 -1.2 membrane protein compare
BPHYT_RS10185 -1.5 -1.6 MarR family transcriptional regulator compare
BPHYT_RS33135 -1.5 -1.7 LysR family transcriptional regulator compare
BPHYT_RS07090 -1.5 -1.3 hypothetical protein compare
BPHYT_RS09970 -1.5 -1.3 glutathione S-transferase compare
BPHYT_RS10165 -1.5 -0.7 transcriptional regulator compare
BPHYT_RS20790 -1.5 -0.7 TetR family transcriptional regulator compare
BPHYT_RS28480 -1.4 -1.9 hydroxyglutarate oxidase compare
BPHYT_RS16385 -1.4 -2.7 hypothetical protein compare
BPHYT_RS33845 -1.4 -1.0 bacteriocin production protein compare
BPHYT_RS20965 -1.4 -2.1 photosystem reaction center subunit H compare
BPHYT_RS09105 -1.4 -4.9 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS14670 -1.4 -0.9 hypothetical protein compare
BPHYT_RS02285 -1.4 -3.6 cell division protein compare
BPHYT_RS06550 -1.4 -1.3 acetolactate synthase compare
BPHYT_RS16215 -1.4 -3.2 sensor histidine kinase compare
BPHYT_RS10645 -1.4 -0.7 cyanate hydratase compare
BPHYT_RS16250 -1.4 -0.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS07540 -1.4 -0.7 hypothetical protein compare
BPHYT_RS33125 -1.3 -1.9 hypothetical protein compare
BPHYT_RS10160 -1.3 -2.2 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
BPHYT_RS23605 -1.3 -2.0 hypothetical protein compare
BPHYT_RS08490 -1.3 -1.3 Crp/Fnr family transcriptional regulator compare
BPHYT_RS30810 -1.3 -1.1 transcriptional regulator compare
BPHYT_RS22135 -1.3 -1.0 3-ketoacyl-ACP reductase compare
BPHYT_RS27410 -1.3 -1.2 amidohydrolase compare
BPHYT_RS08680 -1.3 -1.1 hypothetical protein compare
BPHYT_RS25055 -1.3 -2.1 MFS transporter compare
BPHYT_RS01095 -1.3 -0.9 hypothetical protein compare
BPHYT_RS04860 -1.3 -2.0 ABC transporter ATP-binding protein compare
BPHYT_RS12380 -1.3 -1.7 ABC transporter permease compare
BPHYT_RS36470 -1.3 -0.9 hypothetical protein compare
BPHYT_RS12820 -1.3 -3.3 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS27890 -1.3 -0.4 hypothetical protein compare
BPHYT_RS15890 -1.3 -0.8 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS32860 -1.3 -0.6 hypothetical protein compare
BPHYT_RS28790 -1.3 -1.2 membrane protein compare
BPHYT_RS07855 -1.3 -3.0 benzoate 1,2-dioxygenase subunit alpha compare
BPHYT_RS30340 -1.2 -1.2 AraC family transcriptional regulator compare
BPHYT_RS31545 -1.2 -1.7 membrane protein compare
BPHYT_RS14840 -1.2 -4.8 lytic transglycosylase compare
BPHYT_RS07845 -1.2 -2.0 LysR family transcriptional regulator compare
BPHYT_RS34780 -1.2 -2.0 phytoene synthase compare
BPHYT_RS19890 -1.2 -1.4 hypothetical protein compare
BPHYT_RS20590 -1.2 -1.8 methionine sulfoxide reductase A compare
BPHYT_RS32710 -1.2 -3.1 hypothetical protein compare
BPHYT_RS31195 -1.2 -2.6 peptide ABC transporter permease compare
BPHYT_RS19545 -1.2 -1.8 nuclear protein SET compare
BPHYT_RS23760 -1.2 -1.0 phosphonate ABC transporter permease compare
BPHYT_RS26740 -1.2 -0.8 hypothetical protein compare
BPHYT_RS31055 -1.2 -1.3 glycosyl transferase compare
BPHYT_RS09100 -1.2 -3.7 stationary phase survival protein SurE compare
BPHYT_RS28840 -1.2 -1.4 oxidoreductase compare
BPHYT_RS01240 -1.2 -1.3 hypothetical protein compare
BPHYT_RS09155 -1.2 -2.5 3-ketoacyl-ACP reductase compare
BPHYT_RS24335 -1.2 -2.5 toxin HipA compare
BPHYT_RS28535 -1.2 -0.7 response regulator receiver compare
BPHYT_RS28110 -1.2 -1.0 hypothetical protein compare
BPHYT_RS03410 -1.2 -1.0 queuine tRNA-ribosyltransferase compare
BPHYT_RS10895 -1.2 -1.5 transcriptional regulator compare
BPHYT_RS30290 -1.2 -1.2 MFS transporter compare
BPHYT_RS06470 -1.2 -1.0 membrane protein compare
BPHYT_RS09585 -1.2 -1.0 hypothetical protein compare
BPHYT_RS36365 -1.2 -0.7 hypothetical protein compare
BPHYT_RS06900 -1.2 -2.5 aspartate aminotransferase compare
BPHYT_RS08385 -1.2 -0.8 secretion protein compare
BPHYT_RS08645 -1.2 -1.0 sulfonate ABC transporter compare
BPHYT_RS00440 -1.1 -3.2 ripening-induced protein-Zn-containing oxidoreductase compare
BPHYT_RS09655 -1.1 -3.0 mechanosensitive ion channel protein MscS compare
BPHYT_RS13285 -1.1 -2.3 amino acid ABC transporter ATP-binding protein compare
BPHYT_RS24615 -1.1 -1.7 peptidase M23 compare
BPHYT_RS24315 -1.1 -0.9 phosphoribosyltransferase compare
BPHYT_RS22765 -1.1 -1.7 beta-galactosidase compare
BPHYT_RS12225 -1.1 -1.9 carnitine dehydratase compare
BPHYT_RS17760 -1.1 -4.4 ABC transporter permease compare
BPHYT_RS17830 -1.1 -2.2 histidine kinase compare
BPHYT_RS27090 -1.1 -1.6 aldo/keto reductase compare
BPHYT_RS13265 -1.1 -1.5 hypothetical protein compare
BPHYT_RS27210 -1.1 -1.8 alcohol dehydrogenase compare
BPHYT_RS35300 -1.1 -1.4 flavin reductase compare
BPHYT_RS20905 -1.1 -1.3 hypothetical protein compare
BPHYT_RS12155 -1.1 -2.4 RNA-binding protein S4 compare
BPHYT_RS33365 -1.1 -1.6 PAS sensor protein compare
BPHYT_RS04710 -1.1 -2.3 hypothetical protein compare
BPHYT_RS01280 -1.1 -1.0 hypothetical protein compare
BPHYT_RS10340 -1.1 -1.6 sensor protein Chase2 compare
BPHYT_RS26340 -1.1 -1.6 cupin compare
BPHYT_RS06120 -1.1 -2.2 heat-shock protein compare
BPHYT_RS18255 -1.1 -1.1 phenylacetate-CoA oxygenase subunit PaaB compare
BPHYT_RS20065 -1.1 -1.4 hypothetical protein compare
BPHYT_RS20165 -1.1 -1.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BPHYT_RS23420 -1.1 -2.8 acetoacetyl-CoA synthase compare
BPHYT_RS34235 -1.1 -1.3 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) compare
BPHYT_RS11920 -1.1 -1.4 membrane protein compare
BPHYT_RS29450 -1.0 -0.8 phosphonate metabolism protein compare
BPHYT_RS11980 -1.0 -1.0 LysR family transcriptional regulator compare
BPHYT_RS30505 -1.0 -1.0 ABC transporter permease compare
BPHYT_RS34450 -1.0 -2.4 LysR family transcriptional regulator compare
BPHYT_RS13585 -1.0 -1.6 amino acid ABC transporter permease compare
BPHYT_RS23675 -1.0 -0.8 lysine transporter LysE compare
BPHYT_RS12900 -1.0 -0.7 transposase compare
BPHYT_RS20120 -1.0 -2.0 porin compare
BPHYT_RS30040 -1.0 -0.6 hypothetical protein compare
BPHYT_RS04335 -1.0 -0.6 membrane protein compare
BPHYT_RS14945 -1.0 -1.7 phosphoglycolate phosphatase compare
BPHYT_RS12265 -1.0 -0.8 alanine acetyltransferase compare
BPHYT_RS01530 -1.0 -1.5 penicillin-binding protein 2 compare
BPHYT_RS31255 -1.0 -0.7 cytochrome B561 compare
BPHYT_RS30100 -1.0 -1.3 copper oxidase compare
BPHYT_RS02575 -1.0 -5.2 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS10705 -1.0 -1.8 MFS transporter compare
BPHYT_RS03065 -1.0 -0.8 LuxR family transcriptional regulator compare
BPHYT_RS06340 -1.0 -3.2 SAM-dependent methyltransferase PhcB compare
BPHYT_RS01300 -1.0 -1.6 ArsR family transcriptional regulator compare
BPHYT_RS30800 -1.0 -0.8 MFS transporter compare
BPHYT_RS12510 -1.0 -0.7 RNA-binding protein compare
BPHYT_RS26510 -1.0 -0.8 transcriptional regulator compare
BPHYT_RS27875 -1.0 -1.1 CreA family protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments