Experiment set39S332 for Burkholderia phytofirmans PsJN

Compare to:

36hr Phyto Lib Only

200 most important genes:

  gene name fitness t score description  
BPHYT_RS32360 -4.5 -1.4 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS29540 -3.8 -1.2 aldolase compare
BPHYT_RS00980 -3.2 -1.0 GCN5 family acetyltransferase compare
BPHYT_RS08665 -3.1 -1.0 hypothetical protein compare
BPHYT_RS26490 -3.0 -0.9 hypothetical protein compare
BPHYT_RS26080 -3.0 -0.9 ABC transporter ATPase compare
BPHYT_RS36385 -3.0 -0.9 TetR family transcriptional regulator compare
BPHYT_RS10750 -2.9 -0.9 LysR family transcriptional regulator compare
BPHYT_RS08525 -2.8 -0.9 SAM-dependent methyltransferase compare
BPHYT_RS13470 -2.6 -0.8 arylsulfate sulfotransferase compare
BPHYT_RS24315 -2.6 -1.4 phosphoribosyltransferase compare
BPHYT_RS14060 -2.5 -1.3 peptidase M23 compare
BPHYT_RS27560 -2.5 -1.1 histidine kinase compare
BPHYT_RS10540 -2.2 -1.0 secretion protein compare
BPHYT_RS08235 -2.2 -0.7 nucleoprotein, Hfg, host factor I compare
BPHYT_RS33460 -2.2 -0.9 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS26925 -2.1 -1.2 NIPSNAP family containing protein compare
BPHYT_RS06550 -2.1 -1.4 acetolactate synthase compare
BPHYT_RS06710 -2.1 -0.9 hypothetical protein compare
BPHYT_RS26465 -2.1 -0.9 metallophosphoesterase compare
BPHYT_RS27430 -2.0 -1.1 LysR family transcriptional regulator compare
BPHYT_RS18760 -2.0 -1.6 flagellar biosynthesis protein FliT compare
BPHYT_RS31255 -2.0 -1.0 cytochrome B561 compare
BPHYT_RS02180 -2.0 -1.6 hypothetical protein compare
BPHYT_RS28485 -2.0 -0.6 GntR family transcriptional regulator compare
BPHYT_RS10065 -1.9 -1.0 cytochrome C oxidase subunit I compare
BPHYT_RS08490 -1.9 -1.5 Crp/Fnr family transcriptional regulator compare
BPHYT_RS22865 -1.9 -2.3 ATPase compare
BPHYT_RS06410 -1.9 -2.2 transcriptional regulator compare
BPHYT_RS12615 -1.9 -0.6 dihydrodipicolinate synthase compare
BPHYT_RS20235 -1.8 -4.2 iron ABC transporter compare
BPHYT_RS04595 -1.8 -1.1 cytoplasmic protein compare
BPHYT_RS34810 -1.8 -2.2 RND transporter compare
BPHYT_RS00815 -1.8 -0.9 hypothetical protein compare
BPHYT_RS10645 -1.8 -0.8 cyanate hydratase compare
BPHYT_RS21620 -1.8 -1.1 GCN5 family acetyltransferase compare
BPHYT_RS25780 -1.8 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS02860 -1.8 -0.5 membrane protein compare
BPHYT_RS35090 -1.8 -2.3 diaminopimelate decarboxylase compare
BPHYT_RS28930 -1.8 -1.1 chromosome partitioning protein ParA compare
BPHYT_RS01625 -1.7 -2.0 chemotaxis protein CheY compare
BPHYT_RS04890 -1.7 -1.0 cobalamin biosynthesis protein CobD compare
BPHYT_RS27995 -1.7 -1.5 hypothetical protein compare
BPHYT_RS07540 -1.7 -0.7 hypothetical protein compare
BPHYT_RS03410 -1.7 -1.7 queuine tRNA-ribosyltransferase compare
BPHYT_RS08150 -1.7 -0.7 membrane protein compare
BPHYT_RS29920 -1.7 -0.7 hypothetical protein compare
BPHYT_RS35530 -1.7 -1.8 arsenate reductase compare
BPHYT_RS02765 -1.6 -1.1 cytochrome BD oxidase subunit I compare
BPHYT_RS17240 -1.6 -0.5 cell division protein FtsW compare
BPHYT_RS20545 -1.6 -1.2 hypothetical protein compare
BPHYT_RS09545 -1.6 -1.1 peptide methionine sulfoxide reductase compare
BPHYT_RS26385 -1.6 -1.1 glutamine amidotransferase compare
BPHYT_RS23525 -1.6 -0.8 hypothetical protein compare
BPHYT_RS33360 -1.6 -1.8 formyl-CoA transferase compare
BPHYT_RS36355 -1.5 -1.4 hypothetical protein compare
BPHYT_RS07325 -1.5 -0.5 GntR family transcriptional regulator compare
BPHYT_RS36525 -1.5 -1.1 hypothetical protein compare
BPHYT_RS33135 -1.5 -1.8 LysR family transcriptional regulator compare
BPHYT_RS19660 -1.5 -1.1 hypothetical protein compare
BPHYT_RS12380 -1.5 -2.0 ABC transporter permease compare
BPHYT_RS02285 -1.5 -4.4 cell division protein compare
BPHYT_RS23920 -1.5 -2.1 malonate decarboxylase subunit beta compare
BPHYT_RS08165 -1.5 -1.2 pilus assembly protein TadE compare
BPHYT_RS14945 -1.5 -2.2 phosphoglycolate phosphatase compare
BPHYT_RS28000 -1.4 -1.4 permease compare
BPHYT_RS24755 -1.4 -1.9 catalase compare
BPHYT_RS17890 -1.4 -1.0 shikimate kinase compare
BPHYT_RS03655 -1.4 -0.7 membrane protein compare
BPHYT_RS13585 -1.4 -2.4 amino acid ABC transporter permease compare
BPHYT_RS35315 -1.4 -1.7 threonyl-tRNA synthetase compare
BPHYT_RS33615 -1.4 -1.5 decarboxylase compare
BPHYT_RS09960 -1.4 -2.3 short-chain dehydrogenase compare
BPHYT_RS30065 -1.4 -1.4 shikimate dehydrogenase compare
BPHYT_RS32225 -1.4 -1.8 hypothetical protein compare
BPHYT_RS36130 -1.4 -0.9 hypothetical protein compare
BPHYT_RS25870 -1.3 -0.6 type III secretion system ATPase compare
BPHYT_RS30450 -1.3 -0.6 ABC transporter permease compare
BPHYT_RS26135 -1.3 -0.8 ABC transporter permease compare
BPHYT_RS01950 -1.3 -3.8 phosphoheptose isomerase compare
BPHYT_RS29100 -1.3 -0.8 ketosteroid isomerase compare
BPHYT_RS32260 -1.3 -0.5 hypothetical protein compare
BPHYT_RS14505 -1.3 -1.3 membrane protein compare
BPHYT_RS08335 -1.3 -0.7 hypothetical protein compare
BPHYT_RS19545 -1.3 -2.5 nuclear protein SET compare
BPHYT_RS34320 -1.3 -2.2 DNA-binding protein compare
BPHYT_RS26260 -1.3 -2.4 histidine kinase compare
BPHYT_RS21485 -1.3 -0.8 hypothetical protein compare
BPHYT_RS17265 -1.3 -0.9 cell division protein compare
BPHYT_RS20245 -1.3 -3.0 iron ABC transporter substrate-binding protein compare
BPHYT_RS10475 -1.3 -1.1 mammalian cell entry protein compare
BPHYT_RS07595 -1.3 -0.7 membrane protein compare
BPHYT_RS22990 -1.3 -3.1 nucleobase:cation symporter compare
BPHYT_RS14865 -1.3 -0.9 UDP-glucose 6-dehydrogenase compare
BPHYT_RS05775 -1.3 -1.7 hypothetical protein compare
BPHYT_RS04340 -1.3 -1.5 hypothetical protein compare
BPHYT_RS17395 -1.3 -1.3 anthranilate synthase subunit II compare
BPHYT_RS28675 -1.3 -1.6 hypothetical protein compare
BPHYT_RS22530 -1.3 -1.2 N5,N10-methylene tetrahydromethanopterin reductase compare
BPHYT_RS30010 -1.3 -0.8 cell division protein compare
BPHYT_RS18590 -1.3 -0.5 hypothetical protein compare
BPHYT_RS18660 -1.2 -1.0 hypothetical protein compare
BPHYT_RS28905 -1.2 -0.8 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS01485 -1.2 -0.9 histidine kinase compare
BPHYT_RS23650 -1.2 -0.5 hypothetical protein compare
BPHYT_RS08000 -1.2 -1.6 antibiotic biosynthesis monooxygenase compare
BPHYT_RS26575 -1.2 -1.2 hypothetical protein compare
BPHYT_RS12500 -1.2 -1.7 hypothetical protein compare
BPHYT_RS26400 -1.2 -1.4 sodium:solute symporter compare
BPHYT_RS33130 -1.2 -1.7 transcriptional regulator compare
BPHYT_RS28535 -1.2 -0.7 response regulator receiver compare
BPHYT_RS18610 -1.2 -3.3 lytic transglycosylase compare
BPHYT_RS07335 -1.2 -1.6 nitrate ABC transporter permease compare
BPHYT_RS29485 -1.1 -1.1 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS15190 -1.1 -0.9 acyl carrier protein compare
BPHYT_RS27695 -1.1 -3.1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase compare
BPHYT_RS34815 -1.1 -0.9 ABC transporter compare
BPHYT_RS10670 -1.1 -1.1 catechol 1,2-dioxygenase compare
BPHYT_RS25970 -1.1 -0.5 urea amidolyase compare
BPHYT_RS05900 -1.1 -1.7 hypothetical protein compare
BPHYT_RS19785 -1.1 -1.2 chemotaxis protein CheY compare
BPHYT_RS20590 -1.1 -1.2 methionine sulfoxide reductase A compare
BPHYT_RS09105 -1.1 -2.6 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS30610 -1.1 -1.2 major facilitator transporter compare
BPHYT_RS27920 -1.1 -0.6 tricarballylate utilization protein B compare
BPHYT_RS02985 -1.1 -1.2 MaoC family dehydratase compare
BPHYT_RS27720 -1.1 -1.0 hypothetical protein compare
BPHYT_RS13160 -1.1 -0.7 membrane protein compare
BPHYT_RS02570 -1.1 -5.1 phosphocarrier protein HPr compare
BPHYT_RS07675 -1.1 -1.0 ABC transporter for L-Arginine, permease component 2 (from data) compare
BPHYT_RS29425 -1.1 -3.4 IclR family transcriptional regulator compare
BPHYT_RS22765 -1.0 -1.7 beta-galactosidase compare
BPHYT_RS09115 -1.0 -2.4 RNA polymerase sigma factor RpoS compare
BPHYT_RS14920 -1.0 -1.3 hypothetical protein compare
BPHYT_RS30260 -1.0 -2.4 hypothetical protein compare
BPHYT_RS00940 -1.0 -1.7 transposase compare
BPHYT_RS26655 -1.0 -2.9 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
BPHYT_RS19610 -1.0 -0.8 general secretion pathway protein GspC compare
BPHYT_RS34490 -1.0 -0.5 hypothetical protein compare
BPHYT_RS25400 -1.0 -1.2 butyryl-CoA dehydrogenase compare
BPHYT_RS23675 -1.0 -0.8 lysine transporter LysE compare
BPHYT_RS08965 -1.0 -2.3 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS15020 -1.0 -4.3 tetratricopeptide repeat protein compare
BPHYT_RS18835 -1.0 -0.9 flagellar biosynthesis protein FliR compare
BPHYT_RS17620 -1.0 -4.9 cytochrome C compare
BPHYT_RS27435 -1.0 -3.2 amylo-alpha-1,6-glucosidase compare
BPHYT_RS33630 -1.0 -1.2 chromate transporter compare
BPHYT_RS16555 -1.0 -1.5 cation transporter compare
BPHYT_RS21940 -1.0 -1.4 hemolysin D compare
BPHYT_RS06920 -1.0 -2.5 iron permease FTR1 compare
BPHYT_RS34235 -1.0 -1.3 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data) compare
BPHYT_RS17745 -1.0 -4.7 toluene tolerance family protein compare
BPHYT_RS07400 -1.0 -1.1 hypothetical protein compare
BPHYT_RS19335 -1.0 -0.9 hypothetical protein compare
BPHYT_RS27270 -1.0 -1.4 photosystem reaction center subunit H compare
BPHYT_RS34620 -1.0 -2.9 hypothetical protein compare
BPHYT_RS12820 -1.0 -2.8 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS29655 -1.0 -1.2 polysaccharide deacetylase compare
BPHYT_RS14185 -1.0 -0.6 transcription elongation factor GreA compare
BPHYT_RS14840 -1.0 -3.9 lytic transglycosylase compare
BPHYT_RS30460 -1.0 -1.7 glycerate dehydrogenase compare
BPHYT_RS22930 -1.0 -0.6 type II secretion system protein compare
BPHYT_RS10205 -1.0 -2.0 D-lactate dehydrogenase compare
BPHYT_RS27800 -1.0 -1.3 esterase compare
BPHYT_RS35460 -1.0 -2.4 acyl-CoA dehydrogenase compare
BPHYT_RS28350 -1.0 -0.9 fatty acid desaturase compare
BPHYT_RS25875 -1.0 -0.5 type III secretion protein compare
BPHYT_RS09515 -1.0 -1.4 phosphoribosylformylglycinamidine synthase compare
BPHYT_RS14070 -0.9 -1.4 hypothetical protein compare
BPHYT_RS22940 -0.9 -0.7 pilus assembly protein TadE compare
BPHYT_RS30845 -0.9 -1.5 polyketide cyclase compare
BPHYT_RS23075 -0.9 -1.5 GntR family transcriptional regulator compare
BPHYT_RS26125 -0.9 -2.4 ABC transporter substrate-binding protein compare
BPHYT_RS22360 -0.9 -0.9 response regulator receiver compare
BPHYT_RS07275 -0.9 -2.3 kynureninase compare
BPHYT_RS08680 -0.9 -0.9 hypothetical protein compare
BPHYT_RS29810 -0.9 -0.6 hexapeptide transferase compare
BPHYT_RS11635 -0.9 -0.4 RNA polymerase subunit sigma-24 compare
BPHYT_RS09895 -0.9 -0.7 LysR family transcriptional regulator compare
BPHYT_RS09655 -0.9 -2.5 mechanosensitive ion channel protein MscS compare
BPHYT_RS27860 -0.9 -0.8 membrane protein compare
BPHYT_RS11810 -0.9 -0.7 LysR family transcriptional regulator compare
BPHYT_RS11255 -0.9 -1.6 AsnC family transcriptional regulator compare
BPHYT_RS19710 -0.9 -3.3 aldehyde dehydrogenase compare
BPHYT_RS33120 -0.9 -1.3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
BPHYT_RS04710 -0.9 -1.4 hypothetical protein compare
BPHYT_RS20065 -0.9 -1.3 hypothetical protein compare
BPHYT_RS10725 -0.9 -1.4 polyketide cyclase compare
BPHYT_RS05550 -0.9 -2.7 hypothetical protein compare
BPHYT_RS07405 -0.9 -1.8 UDP-glucose 4-epimerase compare
BPHYT_RS05650 -0.9 -0.8 hypothetical protein compare
BPHYT_RS07130 -0.9 -0.9 biopolymer transporter ExbD compare
BPHYT_RS01280 -0.9 -0.9 hypothetical protein compare
BPHYT_RS20120 -0.9 -1.1 porin compare
BPHYT_RS20905 -0.9 -1.0 hypothetical protein compare
BPHYT_RS23100 -0.9 -1.1 sugar ABC transporter substrate-binding protein compare
BPHYT_RS02575 -0.9 -4.5 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS10575 -0.9 -1.7 hypothetical protein compare
BPHYT_RS26285 -0.9 -1.6 glycogen debranching protein compare
BPHYT_RS14660 -0.9 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in nophagecontrol experiments