Experiment set39S332 for Burkholderia phytofirmans PsJN

Compare to:

36hr Phyto Lib Only

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS11705 +3.0 2.4 hypothetical protein compare
BPHYT_RS19565 +2.6 17.9 gamma-glutamyl:cysteine ligase compare
BPHYT_RS19570 +2.6 22.1 sodium/hydrogen exchanger compare
BPHYT_RS14140 +2.3 7.8 phosphate transporter permease subunit PstC compare
BPHYT_RS33820 +2.3 21.3 histidine kinase compare
BPHYT_RS25770 +2.3 1.8 hypothetical protein compare
BPHYT_RS27495 +2.2 2.0 hypothetical protein compare
BPHYT_RS30995 +2.0 1.1 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS02905 +1.9 17.5 RNA polymerase subunit sigma-54 compare
BPHYT_RS05575 +1.9 15.9 Fis family transcriptional regulator compare
BPHYT_RS09500 +1.9 7.1 glucose-6-phosphate isomerase compare
BPHYT_RS17035 +1.8 2.5 sugar kinase compare
BPHYT_RS13645 +1.7 15.9 threonine--tRNA ligase compare
BPHYT_RS04965 +1.7 10.3 ATP-binding protein compare
BPHYT_RS36275 +1.7 1.7 hypothetical protein compare
BPHYT_RS09330 +1.7 14.0 phytoene synthase compare
BPHYT_RS12465 +1.6 2.4 inositol monophosphatase compare
BPHYT_RS28595 +1.6 1.8 glyoxalase compare
BPHYT_RS03455 +1.6 3.0 paraquat-inducible protein A compare
BPHYT_RS05590 +1.6 12.7 trehalose-6-phosphate synthase compare
BPHYT_RS05560 +1.6 7.8 Fis family transcriptional regulator compare
BPHYT_RS04945 +1.6 13.7 membrane protein compare
BPHYT_RS17095 +1.5 5.4 proline--tRNA ligase compare
BPHYT_RS16180 +1.5 1.0 TetR family transcriptional regulator compare
BPHYT_RS12845 +1.5 12.0 ATPase compare
BPHYT_RS12725 +1.5 13.0 regulator compare
BPHYT_RS05610 +1.5 8.6 DNA-cytosine methyltransferase compare
BPHYT_RS33920 +1.5 8.7 type II citrate synthase compare
BPHYT_RS04950 +1.5 12.1 hypothetical protein compare
BPHYT_RS25935 +1.5 1.0 type III secretion protein compare
BPHYT_RS23250 +1.4 1.8 hypothetical protein compare
BPHYT_RS04940 +1.4 3.9 hypothetical protein compare
BPHYT_RS18655 +1.4 7.6 3-oxoacyl-ACP synthase compare
BPHYT_RS16065 +1.4 1.0 LacI family transcriptional regulator compare
BPHYT_RS09815 +1.4 2.4 malate synthase compare
BPHYT_RS06075 +1.4 10.1 hypothetical protein compare
BPHYT_RS04430 +1.3 1.3 amino acid ABC transporter ATPase compare
BPHYT_RS05285 +1.3 1.6 hypothetical protein compare
BPHYT_RS26975 +1.3 2.0 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS16710 +1.3 0.5 LysR family transcriptional regulator compare
BPHYT_RS14485 +1.3 4.8 ribonuclease E compare
BPHYT_RS09660 +1.3 7.9 trehalose-6-phosphate synthase compare
BPHYT_RS36470 +1.3 0.7 hypothetical protein compare
BPHYT_RS14400 +1.3 4.0 anti-sigma factor compare
BPHYT_RS28025 +1.3 1.1 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS03400 +1.3 0.7 ATP-dependent DNA helicase RecG compare
BPHYT_RS02640 +1.3 10.0 cytochrome C oxidase compare
BPHYT_RS17640 +1.3 1.6 2-alkenal reductase compare
BPHYT_RS04285 +1.3 0.7 rhamnosyltransferase compare
BPHYT_RS07570 +1.3 1.4 hypothetical protein compare
BPHYT_RS23910 +1.3 3.4 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS26570 +1.2 1.4 5'-nucleotidase compare
BPHYT_RS31615 +1.2 1.7 thiamine pyrophosphate protein compare
BPHYT_RS26930 +1.2 5.6 mechanosensitive ion channel protein compare
BPHYT_RS04290 +1.2 0.8 glycosyl transferase family 2 compare
BPHYT_RS05615 +1.2 1.3 hypothetical protein compare
BPHYT_RS35310 +1.2 2.0 GCN5 family N-acetyltransferase compare
BPHYT_RS16335 +1.2 3.3 membrane protein compare
BPHYT_RS23460 +1.2 0.9 AraC family transcriptional regulator compare
BPHYT_RS06390 +1.2 2.4 ribosome-associated protein IOJAP compare
BPHYT_RS25955 +1.2 1.4 transcriptional regulator compare
BPHYT_RS26685 +1.2 1.1 precorrin-8X methylmutase compare
BPHYT_RS08945 +1.2 7.0 hypothetical protein compare
BPHYT_RS31440 +1.2 1.5 hypothetical protein compare
BPHYT_RS12985 +1.2 1.3 amino acid acetyltransferase compare
BPHYT_RS05155 +1.2 6.8 acetyltransferase GCN5 compare
BPHYT_RS06985 +1.2 5.1 fumarate hydratase compare
BPHYT_RS08850 +1.2 0.5 transcriptional regulator compare
BPHYT_RS35235 +1.2 2.1 amino acid transporter compare
BPHYT_RS14135 +1.2 4.5 phosphate transporter permease subunit PtsA compare
BPHYT_RS12150 +1.1 8.9 PII uridylyl-transferase compare
BPHYT_RS26300 +1.1 1.5 ATP-dependent DNA ligase compare
BPHYT_RS32475 +1.1 3.4 dihydroxyacetone kinase compare
BPHYT_RS01455 +1.1 1.3 peptide deformylase compare
BPHYT_RS24045 +1.1 2.1 amino acid ABC transporter compare
BPHYT_RS34185 +1.1 3.5 cold-shock protein compare
BPHYT_RS25500 +1.1 1.3 hypothetical protein compare
BPHYT_RS02880 +1.1 1.8 ATP-dependent protease compare
BPHYT_RS12550 +1.1 0.7 GTP-binding protein HflX compare
BPHYT_RS00705 +1.1 1.4 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS21025 +1.1 1.4 cation-binding protein compare
BPHYT_RS02650 +1.1 3.0 membrane protein compare
BPHYT_RS12990 +1.1 2.8 iron transporter compare
BPHYT_RS10400 +1.1 1.1 taurine ABC transporter permease compare
BPHYT_RS20115 +1.1 1.5 transcriptional regulator compare
BPHYT_RS14395 +1.1 6.3 sugar dehydratase compare
BPHYT_RS28670 +1.1 1.7 MFS transporter compare
BPHYT_RS10945 +1.1 1.8 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS17490 +1.1 2.4 haloacid dehalogenase compare
BPHYT_RS09390 +1.1 2.4 ABC transporter permease compare
BPHYT_RS14855 +1.1 0.4 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS23445 +1.1 1.4 hexuronate transporter compare
BPHYT_RS14145 +1.1 6.4 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS35100 +1.1 1.2 ABC transporter substrate-binding protein compare
BPHYT_RS11170 +1.0 0.8 hypothetical protein compare
BPHYT_RS24135 +1.0 1.7 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS20665 +1.0 0.7 LysR family transcriptional regulator compare
BPHYT_RS13610 +1.0 1.9 MerR family transcriptional regulator compare
BPHYT_RS11080 +1.0 2.4 hypothetical protein compare
BPHYT_RS06530 +1.0 1.6 membrane protein compare
BPHYT_RS03620 +1.0 6.3 poly(A) polymerase compare
BPHYT_RS12510 +1.0 1.0 RNA-binding protein compare
BPHYT_RS02005 +1.0 1.6 diguanylate phosphodiesterase compare
BPHYT_RS06375 +1.0 2.5 ribonuclease compare
BPHYT_RS06910 +1.0 3.7 membrane protein compare
BPHYT_RS09980 +1.0 1.1 TetR family transcriptional regulator compare
BPHYT_RS25585 +1.0 1.7 membrane protein compare
BPHYT_RS12535 +1.0 0.7 membrane protein compare
BPHYT_RS02540 +1.0 2.3 hypothetical protein compare
BPHYT_RS20725 +1.0 1.5 histidine kinase compare
BPHYT_RS26450 +1.0 1.7 transcriptional regulator compare
BPHYT_RS23435 +1.0 2.1 MFS transporter compare
BPHYT_RS26820 +1.0 1.5 LysR family transcriptional regulator compare
BPHYT_RS30880 +1.0 3.0 peptidase S13 compare
BPHYT_RS07580 +1.0 3.0 N-formimino-L-glutamate deiminase compare
BPHYT_RS02635 +1.0 5.7 membrane protein compare
BPHYT_RS10315 +1.0 3.5 MFS transporter compare
BPHYT_RS29300 +1.0 2.1 endoribonuclease L-PSP compare
BPHYT_RS29410 +0.9 3.2 HPr kinase compare
BPHYT_RS27690 +0.9 2.3 carbamate kinase compare
BPHYT_RS21475 +0.9 1.3 hypothetical protein compare
BPHYT_RS01340 +0.9 1.6 ChrB domain-containing protein compare
BPHYT_RS32750 +0.9 1.2 lipoprotein compare
BPHYT_RS34295 +0.9 1.1 fimbrial protein compare
BPHYT_RS07840 +0.9 1.7 muconate cycloisomerase compare
BPHYT_RS24095 +0.9 2.4 membrane protein compare
BPHYT_RS32880 +0.9 1.3 alanine acetyltransferase compare
BPHYT_RS06415 +0.9 2.1 uracil phosphoribosyltransferase compare
BPHYT_RS29720 +0.9 0.9 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS22735 +0.9 2.1 sugar ABC transporter ATP-binding protein compare
BPHYT_RS33390 +0.9 2.0 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS33215 +0.9 1.7 glycosyltransferase compare
BPHYT_RS21725 +0.9 1.7 taurine ABC transporter substrate-binding protein compare
BPHYT_RS06065 +0.9 5.0 cytochrome C compare
BPHYT_RS14175 +0.9 2.3 RNA-binding protein compare
BPHYT_RS10570 +0.9 1.7 LysR family transcriptional regulator compare
BPHYT_RS26550 +0.9 1.1 Fis family transcriptional regulator compare
BPHYT_RS24550 +0.9 2.7 hypothetical protein compare
BPHYT_RS32110 +0.9 1.2 transcriptional regulator compare
BPHYT_RS02525 +0.9 4.9 membrane protein compare
BPHYT_RS13200 +0.9 1.7 molybdopterin binding oxidoreductase compare
BPHYT_RS18420 +0.9 2.3 hypothetical protein compare
BPHYT_RS09525 +0.9 2.2 toxin HipA compare
BPHYT_RS09640 +0.9 4.2 DNAase compare
BPHYT_RS02725 +0.9 3.3 GntR family transcriptional regulator compare
BPHYT_RS25630 +0.9 2.0 glutathione S-transferase compare
BPHYT_RS10120 +0.9 1.2 membrane protein compare
BPHYT_RS02865 +0.9 0.5 hypothetical protein compare
BPHYT_RS14095 +0.9 1.2 phosphohistidine phosphatase compare
BPHYT_RS31225 +0.9 1.6 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS11495 +0.9 2.3 membrane protein compare
BPHYT_RS23345 +0.9 2.4 nucleotide sugar dehydrogenase compare
BPHYT_RS17100 +0.9 3.1 RNA pyrophosphohydrolase compare
BPHYT_RS03015 +0.9 1.0 aldolase compare
BPHYT_RS15415 +0.9 5.2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS14130 +0.9 3.1 phosphate ABC transporter ATP-binding protein compare
BPHYT_RS08405 +0.9 1.3 hypothetical protein compare
BPHYT_RS30635 +0.9 2.1 D-aminopeptidase compare
BPHYT_RS10005 +0.9 1.0 hypothetical protein compare
BPHYT_RS09260 +0.9 2.3 histidine kinase compare
BPHYT_RS10965 +0.9 2.3 hypothetical protein compare
BPHYT_RS26680 +0.8 1.9 oxidoreductase compare
BPHYT_RS04720 +0.8 3.7 transcriptional regulator compare
BPHYT_RS12840 +0.8 1.9 pyruvate dehydrogenase compare
BPHYT_RS06610 +0.8 0.9 triosephosphate isomerase compare
BPHYT_RS15075 +0.8 0.6 dihydrokaempferol 4-reductase compare
BPHYT_RS08060 +0.8 4.6 ribosome maturation factor RimP compare
BPHYT_RS02435 +0.8 0.9 hypothetical protein compare
BPHYT_RS16345 +0.8 1.9 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS16430 +0.8 7.2 cytochrome C compare
BPHYT_RS12815 +0.8 3.2 IclR family transcriptional regulator compare
BPHYT_RS28985 +0.8 3.2 hypothetical protein compare
BPHYT_RS15360 +0.8 2.1 hypothetical protein compare
BPHYT_RS34035 +0.8 1.5 type II and III secretion system outermembrane protein, secretin compare
BPHYT_RS27940 +0.8 2.2 FAD-binding protein compare
BPHYT_RS21170 +0.8 1.4 LysR family transcriptional regulator compare
BPHYT_RS05705 +0.8 0.9 hypothetical protein compare
BPHYT_RS02595 +0.8 1.5 sulfurtransferase compare
BPHYT_RS06840 +0.8 3.2 hypothetical protein compare
BPHYT_RS35550 +0.8 1.4 nitrile hydratase compare
BPHYT_RS29320 +0.8 0.4 histidine kinase compare
BPHYT_RS03625 +0.8 4.2 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS25395 +0.8 1.5 3-oxoacyl-ACP reductase compare
BPHYT_RS13935 +0.8 1.1 mannosyltransferase compare
BPHYT_RS22000 +0.8 1.6 hypothetical protein compare
BPHYT_RS23760 +0.8 1.6 phosphonate ABC transporter permease compare
BPHYT_RS29500 +0.8 1.7 hypothetical protein compare
BPHYT_RS26750 +0.8 1.3 aldolase compare
BPHYT_RS07300 +0.8 2.3 porin compare
BPHYT_RS14340 +0.8 4.8 Fis family transcriptional regulator compare
BPHYT_RS02530 +0.8 4.2 hypothetical protein compare
BPHYT_RS22400 +0.8 1.3 hypothetical protein compare
BPHYT_RS07055 +0.8 2.7 sulfotransferase compare
BPHYT_RS01435 +0.8 7.3 LysR family transcriptional regulator compare
BPHYT_RS22200 +0.8 1.3 cardiolipin synthetase compare
BPHYT_RS26775 +0.8 1.0 chemotaxis protein CheB compare
BPHYT_RS09930 +0.8 1.2 LysR family transcriptional regulator compare
BPHYT_RS05570 +0.8 2.6 hypothetical protein compare
BPHYT_RS11405 +0.8 1.7 hypothetical protein compare
BPHYT_RS11815 +0.8 1.3 alcohol dehydrogenase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in nophagecontrol experiments