Experiment set39S331 for Burkholderia phytofirmans PsJN

Compare to:

24hr Phyto Lib Only

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS11705 +3.7 2.7 hypothetical protein compare
BPHYT_RS19570 +3.3 28.2 sodium/hydrogen exchanger compare
BPHYT_RS19565 +3.2 19.6 gamma-glutamyl:cysteine ligase compare
BPHYT_RS14140 +2.9 5.7 phosphate transporter permease subunit PstC compare
BPHYT_RS33820 +2.8 26.5 histidine kinase compare
BPHYT_RS16675 +2.8 2.7 dihydroorotase compare
BPHYT_RS25935 +2.6 2.0 type III secretion protein compare
BPHYT_RS02905 +2.5 22.3 RNA polymerase subunit sigma-54 compare
BPHYT_RS09330 +2.4 22.0 phytoene synthase compare
BPHYT_RS06530 +2.3 2.6 membrane protein compare
BPHYT_RS33920 +2.3 16.3 type II citrate synthase compare
BPHYT_RS04965 +2.2 16.4 ATP-binding protein compare
BPHYT_RS05575 +2.2 19.1 Fis family transcriptional regulator compare
BPHYT_RS06075 +2.2 16.6 hypothetical protein compare
BPHYT_RS04945 +2.2 19.5 membrane protein compare
BPHYT_RS12845 +2.2 16.3 ATPase compare
BPHYT_RS23910 +2.1 10.3 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS14855 +2.1 1.0 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS13645 +2.1 18.2 threonine--tRNA ligase compare
BPHYT_RS02595 +2.1 2.9 sulfurtransferase compare
BPHYT_RS04950 +2.1 17.4 hypothetical protein compare
BPHYT_RS27890 +2.0 1.2 hypothetical protein compare
BPHYT_RS05560 +2.0 14.1 Fis family transcriptional regulator compare
BPHYT_RS05590 +2.0 15.8 trehalose-6-phosphate synthase compare
BPHYT_RS05155 +1.9 9.4 acetyltransferase GCN5 compare
BPHYT_RS18655 +1.9 6.4 3-oxoacyl-ACP synthase compare
BPHYT_RS17095 +1.9 9.5 proline--tRNA ligase compare
BPHYT_RS02540 +1.9 5.1 hypothetical protein compare
BPHYT_RS14400 +1.8 5.9 anti-sigma factor compare
BPHYT_RS17240 +1.8 1.1 cell division protein FtsW compare
BPHYT_RS09500 +1.8 10.0 glucose-6-phosphate isomerase compare
BPHYT_RS04940 +1.8 3.2 hypothetical protein compare
BPHYT_RS05610 +1.7 14.1 DNA-cytosine methyltransferase compare
BPHYT_RS12725 +1.7 14.8 regulator compare
BPHYT_RS32260 +1.7 1.7 hypothetical protein compare
BPHYT_RS16180 +1.7 1.1 TetR family transcriptional regulator compare
BPHYT_RS21905 +1.7 1.4 IclR family transcriptional regulator compare
BPHYT_RS09660 +1.6 8.6 trehalose-6-phosphate synthase compare
BPHYT_RS28595 +1.6 2.1 glyoxalase compare
BPHYT_RS06985 +1.6 7.4 fumarate hydratase compare
BPHYT_RS23155 +1.6 2.4 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS09815 +1.6 2.9 malate synthase compare
BPHYT_RS04285 +1.5 0.8 rhamnosyltransferase compare
BPHYT_RS12150 +1.5 11.3 PII uridylyl-transferase compare
BPHYT_RS12465 +1.5 3.0 inositol monophosphatase compare
BPHYT_RS01630 +1.5 1.7 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS04370 +1.5 0.5 glycosyl transferase compare
BPHYT_RS02435 +1.5 1.7 hypothetical protein compare
BPHYT_RS16065 +1.5 1.1 LacI family transcriptional regulator compare
BPHYT_RS25800 +1.5 2.6 sugar ABC transporter permease compare
BPHYT_RS20790 +1.5 1.0 TetR family transcriptional regulator compare
BPHYT_RS14395 +1.5 6.7 sugar dehydratase compare
BPHYT_RS12990 +1.5 4.1 iron transporter compare
BPHYT_RS07570 +1.5 1.7 hypothetical protein compare
BPHYT_RS25210 +1.5 1.9 drug:proton antiporter compare
BPHYT_RS16390 +1.5 5.3 MarR family transcriptional regulator compare
BPHYT_RS14145 +1.5 7.3 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS02640 +1.5 10.7 cytochrome C oxidase compare
BPHYT_RS14485 +1.4 4.1 ribonuclease E compare
BPHYT_RS11555 +1.4 2.8 allantoinase compare
BPHYT_RS33580 +1.4 6.8 geranyltranstransferase compare
BPHYT_RS28670 +1.4 2.0 MFS transporter compare
BPHYT_RS25980 +1.4 1.4 urea carboxylase compare
BPHYT_RS12290 +1.4 3.1 universal stress protein UspA compare
BPHYT_RS08945 +1.4 7.2 hypothetical protein compare
BPHYT_RS31615 +1.4 1.6 thiamine pyrophosphate protein compare
BPHYT_RS28485 +1.4 0.8 GntR family transcriptional regulator compare
BPHYT_RS06175 +1.4 4.2 LPS biosynthesis compare
BPHYT_RS08850 +1.4 0.6 transcriptional regulator compare
BPHYT_RS08130 +1.3 1.4 transposase compare
BPHYT_RS34185 +1.3 3.3 cold-shock protein compare
BPHYT_RS20220 +1.3 1.3 antibiotic synthesis protein MbtH compare
BPHYT_RS06065 +1.3 6.4 cytochrome C compare
BPHYT_RS23435 +1.2 2.1 MFS transporter compare
BPHYT_RS16335 +1.2 3.2 membrane protein compare
BPHYT_RS28860 +1.2 1.4 haloacid dehalogenase compare
BPHYT_RS02525 +1.2 5.8 membrane protein compare
BPHYT_RS21475 +1.2 1.5 hypothetical protein compare
BPHYT_RS06070 +1.2 7.1 cytochrome C compare
BPHYT_RS08565 +1.2 0.7 dihydroorotate dehydrogenase compare
BPHYT_RS16345 +1.2 2.7 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS15620 +1.2 4.4 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS26975 +1.2 1.7 L-lactate dehydrogenase, LldE subunit (from data) compare
BPHYT_RS05615 +1.2 1.0 hypothetical protein compare
BPHYT_RS17100 +1.2 4.4 RNA pyrophosphohydrolase compare
BPHYT_RS08335 +1.2 1.1 hypothetical protein compare
BPHYT_RS11480 +1.1 2.3 heme ABC transporter ATP-binding protein compare
BPHYT_RS02865 +1.1 0.7 hypothetical protein compare
BPHYT_RS12060 +1.1 2.0 hypothetical protein compare
BPHYT_RS26300 +1.1 1.5 ATP-dependent DNA ligase compare
BPHYT_RS18255 +1.1 1.7 phenylacetate-CoA oxygenase subunit PaaB compare
BPHYT_RS03620 +1.1 6.0 poly(A) polymerase compare
BPHYT_RS04290 +1.1 0.6 glycosyl transferase family 2 compare
BPHYT_RS23455 +1.1 1.1 phosphorylase compare
BPHYT_RS30450 +1.1 0.8 ABC transporter permease compare
BPHYT_RS02635 +1.1 6.1 membrane protein compare
BPHYT_RS10540 +1.1 1.2 secretion protein compare
BPHYT_RS09860 +1.1 0.8 pilus assembly protein PilP compare
BPHYT_RS07840 +1.1 1.5 muconate cycloisomerase compare
BPHYT_RS35310 +1.1 1.3 GCN5 family N-acetyltransferase compare
BPHYT_RS30750 +1.1 1.2 GntR family transcriptional regulator compare
BPHYT_RS05670 +1.1 1.8 hypothetical protein compare
BPHYT_RS08510 +1.1 1.9 acyl-CoA dehydrogenase compare
BPHYT_RS28505 +1.1 2.0 5-deoxyglucuronate isomerase compare
BPHYT_RS02650 +1.1 2.8 membrane protein compare
BPHYT_RS30860 +1.0 2.5 sugar ABC transporter permease compare
BPHYT_RS22860 +1.0 1.3 chemotaxis protein CheY compare
BPHYT_RS13555 +1.0 2.4 acyl-CoA dehydrogenase compare
BPHYT_RS09160 +1.0 3.7 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS08765 +1.0 1.1 ABC transporter ATP-binding protein compare
BPHYT_RS05585 +1.0 4.0 hypothetical protein compare
BPHYT_RS26435 +1.0 1.3 hypothetical protein compare
BPHYT_RS10320 +1.0 4.5 hypothetical protein compare
BPHYT_RS26780 +1.0 5.6 chemotaxis protein CheR compare
BPHYT_RS16435 +1.0 7.9 alcohol dehydrogenase compare
BPHYT_RS31890 +1.0 1.6 transposase compare
BPHYT_RS21470 +1.0 1.9 6-hydroxynicotinate reductase compare
BPHYT_RS10995 +1.0 1.6 GntR family transcriptional regulator compare
BPHYT_RS32675 +1.0 1.0 2-methylcitrate dehydratase compare
BPHYT_RS10590 +1.0 1.7 hypothetical protein compare
BPHYT_RS08905 +1.0 1.8 peroxiredoxin compare
BPHYT_RS25065 +1.0 1.6 glycine/betaine ABC transporter ATPase compare
BPHYT_RS01505 +1.0 2.1 7-cyano-7-deazaguanine reductase compare
BPHYT_RS16430 +1.0 8.8 cytochrome C compare
BPHYT_RS20055 +1.0 2.0 hypothetical protein compare
BPHYT_RS14340 +1.0 6.2 Fis family transcriptional regulator compare
BPHYT_RS32960 +1.0 2.3 short-chain dehydrogenase compare
BPHYT_RS16175 +1.0 0.6 hemolysin D compare
BPHYT_RS31225 +1.0 1.6 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS25845 +1.0 0.9 RND transporter MFP subunit compare
BPHYT_RS31440 +1.0 2.0 hypothetical protein compare
BPHYT_RS07255 +1.0 1.3 4-oxalocrotonate decarboxylase compare
BPHYT_RS20715 +1.0 1.4 peptidase compare
BPHYT_RS09640 +1.0 4.1 DNAase compare
BPHYT_RS17035 +1.0 0.8 sugar kinase compare
BPHYT_RS13885 +1.0 1.9 myo-inositol 2-dehydrogenase compare
BPHYT_RS07580 +1.0 2.9 N-formimino-L-glutamate deiminase compare
BPHYT_RS34430 +1.0 2.1 2-keto-4-pentenoate hydratase compare
BPHYT_RS12615 +1.0 0.5 dihydrodipicolinate synthase compare
BPHYT_RS32735 +1.0 3.4 hypothetical protein compare
BPHYT_RS02665 +1.0 6.6 MFS transporter compare
BPHYT_RS10720 +1.0 1.4 hypothetical protein compare
BPHYT_RS26930 +1.0 4.0 mechanosensitive ion channel protein compare
BPHYT_RS33885 +0.9 7.1 tRNA pseudouridine synthase A compare
BPHYT_RS23460 +0.9 0.7 AraC family transcriptional regulator compare
BPHYT_RS27270 +0.9 2.1 photosystem reaction center subunit H compare
BPHYT_RS24965 +0.9 1.5 hypothetical protein compare
BPHYT_RS20665 +0.9 0.6 LysR family transcriptional regulator compare
BPHYT_RS04750 +0.9 1.5 uroporphyrin-III C-methyltransferase compare
BPHYT_RS34485 +0.9 1.9 diguanylate phosphodiesterase compare
BPHYT_RS12635 +0.9 3.4 translation factor Sua5 compare
BPHYT_RS11965 +0.9 3.0 alkylhydroperoxidase compare
BPHYT_RS08135 +0.9 1.2 hypothetical protein compare
BPHYT_RS25970 +0.9 0.6 urea amidolyase compare
BPHYT_RS13200 +0.9 2.4 molybdopterin binding oxidoreductase compare
BPHYT_RS09445 +0.9 3.0 trigger factor compare
BPHYT_RS08685 +0.9 2.6 hypothetical protein compare
BPHYT_RS30290 +0.9 1.6 MFS transporter compare
BPHYT_RS17945 +0.9 2.3 cytochrome C biogenesis protein compare
BPHYT_RS04720 +0.9 5.0 transcriptional regulator compare
BPHYT_RS12535 +0.9 0.6 membrane protein compare
BPHYT_RS03400 +0.9 0.4 ATP-dependent DNA helicase RecG compare
BPHYT_RS15305 +0.9 3.4 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
BPHYT_RS05850 +0.9 2.0 hypothetical protein compare
BPHYT_RS11190 +0.9 4.1 PrkA family serine protein kinase compare
BPHYT_RS31400 +0.9 1.3 methyl-accepting chemotaxis protein compare
BPHYT_RS34920 +0.9 1.4 IclR family transcriptional regulator compare
BPHYT_RS32290 +0.9 1.3 hypothetical protein compare
BPHYT_RS34220 +0.9 1.9 L-fucono-1,5-lactonase (from data) compare
BPHYT_RS05025 +0.9 1.0 sugar ABC transporter substrate-binding protein compare
BPHYT_RS14845 +0.9 0.5 cysteine synthase compare
BPHYT_RS06375 +0.9 1.9 ribonuclease compare
BPHYT_RS31460 +0.9 2.7 hypothetical protein compare
BPHYT_RS02655 +0.9 3.2 cytochrome C oxidase assembly protein compare
BPHYT_RS21700 +0.9 1.2 phosphotransacetylase compare
BPHYT_RS26325 +0.9 2.0 ATPase compare
BPHYT_RS15415 +0.9 5.6 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS03625 +0.9 3.8 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS05335 +0.9 2.1 AraC family transcriptional regulator compare
BPHYT_RS25340 +0.9 1.4 sulfatase compare
BPHYT_RS02760 +0.9 0.7 cytochrome BD oxidase subunit II compare
BPHYT_RS22320 +0.9 2.3 hypothetical protein compare
BPHYT_RS09205 +0.9 1.8 cytochrome P450 compare
BPHYT_RS31110 +0.9 1.5 hypothetical protein compare
BPHYT_RS25830 +0.9 1.8 sugar ABC transporter substrate-binding protein compare
BPHYT_RS11530 +0.9 1.7 5-hydroxyisourate hydrolase compare
BPHYT_RS08125 +0.9 4.7 ATPase compare
BPHYT_RS06610 +0.9 0.8 triosephosphate isomerase compare
BPHYT_RS07060 +0.9 1.9 aldo/keto reductase compare
BPHYT_RS09850 +0.9 1.5 molybdopterin oxidoreductase compare
BPHYT_RS26135 +0.9 0.9 ABC transporter permease compare
BPHYT_RS26910 +0.9 2.0 hypothetical protein compare
BPHYT_RS02530 +0.8 3.6 hypothetical protein compare
BPHYT_RS02900 +0.8 2.5 ribosome hibernation promoting factor compare
BPHYT_RS22815 +0.8 1.2 TonB-denpendent receptor compare
BPHYT_RS27345 +0.8 2.3 aldehyde dehydrogenase compare
BPHYT_RS31450 +0.8 2.7 hypothetical protein compare
BPHYT_RS02005 +0.8 1.1 diguanylate phosphodiesterase compare
BPHYT_RS13325 +0.8 1.2 TetR family transcriptional regulator compare
BPHYT_RS25080 +0.8 0.5 glycine/betaine ABC transporter substrate-binding protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in nophagecontrol experiments