Experiment set39S328 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO6 MOI 0.1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS23990 -3.9 -1.2 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS11155 -3.8 -1.2 hypothetical protein compare
BPHYT_RS08765 -3.7 -1.2 ABC transporter ATP-binding protein compare
BPHYT_RS10650 -3.5 -1.1 membrane protein compare
BPHYT_RS11745 -3.4 -1.1 (2Fe-2S)-binding protein compare
BPHYT_RS27920 -3.2 -1.0 tricarballylate utilization protein B compare
BPHYT_RS29920 -3.0 -0.9 hypothetical protein compare
BPHYT_RS04885 -3.0 -2.2 threonine-phosphate decarboxylase compare
BPHYT_RS28300 -2.9 -0.9 histone nucleoid-structuring protein H-NS compare
BPHYT_RS08360 -2.8 -1.5 LysR family transcriptional regulator compare
BPHYT_RS01095 -2.7 -1.2 hypothetical protein compare
BPHYT_RS31050 -2.7 -0.9 epimerase compare
BPHYT_RS19610 -2.7 -1.2 general secretion pathway protein GspC compare
BPHYT_RS25870 -2.7 -0.8 type III secretion system ATPase compare
BPHYT_RS16555 -2.6 -2.5 cation transporter compare
BPHYT_RS18590 -2.6 -0.8 hypothetical protein compare
BPHYT_RS12925 -2.6 -0.8 exodeoxyribonuclease III compare
BPHYT_RS23650 -2.6 -0.8 hypothetical protein compare
BPHYT_RS14865 -2.6 -1.4 UDP-glucose 6-dehydrogenase compare
BPHYT_RS04865 -2.5 -2.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BPHYT_RS20235 -2.4 -4.1 iron ABC transporter compare
BPHYT_RS31415 -2.3 -1.2 amino acid ABC transporter permease compare
BPHYT_RS14060 -2.3 -1.2 peptidase M23 compare
BPHYT_RS05285 -2.3 -1.0 hypothetical protein compare
BPHYT_RS29810 -2.2 -1.0 hexapeptide transferase compare
BPHYT_RS32240 -2.2 -1.4 chromosome replication initiation inhibitor protein compare
BPHYT_RS08165 -2.2 -1.4 pilus assembly protein TadE compare
BPHYT_RS21330 -2.1 -1.2 hypothetical protein compare
BPHYT_RS23525 -2.1 -0.9 hypothetical protein compare
BPHYT_RS10945 -2.1 -1.3 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS03280 -2.1 -0.9 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS11680 -2.1 -1.1 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS21620 -2.1 -1.1 GCN5 family acetyltransferase compare
BPHYT_RS26125 -2.0 -3.3 ABC transporter substrate-binding protein compare
BPHYT_RS23475 -2.0 -0.9 luciferase compare
BPHYT_RS18610 -2.0 -3.3 lytic transglycosylase compare
BPHYT_RS36365 -2.0 -1.1 hypothetical protein compare
BPHYT_RS32360 -2.0 -1.1 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS22910 -2.0 -0.6 hypothetical protein compare
BPHYT_RS27295 -1.9 -1.1 hypothetical protein compare
BPHYT_RS22360 -1.9 -1.0 response regulator receiver compare
BPHYT_RS33045 -1.9 -1.0 response regulator receiver protein compare
BPHYT_RS06950 -1.9 -2.7 LysR family transcriptional regulator compare
BPHYT_RS27125 -1.9 -1.0 hypothetical protein compare
BPHYT_RS24590 -1.8 -0.8 DeoR faimly transcriptional regulator compare
BPHYT_RS08385 -1.8 -1.0 secretion protein compare
BPHYT_RS28485 -1.8 -0.6 GntR family transcriptional regulator compare
BPHYT_RS33990 -1.8 -1.0 ATPase compare
BPHYT_RS17405 -1.8 -1.0 indole-3-glycerol phosphate synthase compare
BPHYT_RS09585 -1.8 -1.1 hypothetical protein compare
BPHYT_RS10355 -1.8 -1.4 nitrate reductase compare
BPHYT_RS06320 -1.8 -0.8 chemotaxis protein CheY compare
BPHYT_RS33655 -1.8 -2.4 MarR family transcriptional regulator compare
BPHYT_RS09930 -1.7 -1.2 LysR family transcriptional regulator compare
BPHYT_RS08965 -1.7 -3.0 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS19545 -1.7 -2.3 nuclear protein SET compare
BPHYT_RS26880 -1.7 -1.3 ketosteroid isomerase compare
BPHYT_RS13160 -1.7 -0.9 membrane protein compare
BPHYT_RS14505 -1.7 -1.4 membrane protein compare
BPHYT_RS25500 -1.7 -1.1 hypothetical protein compare
BPHYT_RS30745 -1.7 -1.2 hypothetical protein compare
BPHYT_RS02860 -1.6 -0.5 membrane protein compare
BPHYT_RS29185 -1.6 -1.0 sugar ABC transporter permease compare
BPHYT_RS16250 -1.6 -0.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS11265 -1.6 -1.0 hypothetical protein compare
BPHYT_RS25780 -1.6 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS26660 -1.6 -1.9 precorrin-4 C11-methyltransferase compare
BPHYT_RS14210 -1.6 -2.6 hydroxyacylglutathione hydrolase compare
BPHYT_RS26355 -1.6 -1.0 hypothetical protein compare
BPHYT_RS14840 -1.6 -5.9 lytic transglycosylase compare
BPHYT_RS22930 -1.6 -0.7 type II secretion system protein compare
BPHYT_RS24955 -1.6 -1.5 cytochrome C peroxidase compare
BPHYT_RS36525 -1.6 -1.1 hypothetical protein compare
BPHYT_RS10120 -1.6 -1.7 membrane protein compare
BPHYT_RS32785 -1.6 -3.5 membrane protein compare
BPHYT_RS07320 -1.5 -0.8 dihydrodipicolinate synthetase compare
BPHYT_RS33845 -1.5 -1.0 bacteriocin production protein compare
BPHYT_RS04890 -1.5 -0.9 cobalamin biosynthesis protein CobD compare
BPHYT_RS26305 -1.5 -1.6 exonuclease compare
BPHYT_RS34810 -1.5 -1.9 RND transporter compare
BPHYT_RS03065 -1.5 -1.0 LuxR family transcriptional regulator compare
BPHYT_RS23880 -1.5 -1.1 sugar ABC transporter permease compare
BPHYT_RS15015 -1.5 -0.6 ArsR family transcriptional regulator compare
BPHYT_RS09265 -1.5 -1.9 chemotaxis protein CheY compare
BPHYT_RS01950 -1.5 -2.7 phosphoheptose isomerase compare
BPHYT_RS34490 -1.5 -0.6 hypothetical protein compare
BPHYT_RS33030 -1.5 -0.9 hypothetical protein compare
BPHYT_RS33610 -1.5 -0.9 DNA polymerase I compare
BPHYT_RS14550 -1.5 -0.6 tRNA-Asn compare
BPHYT_RS07675 -1.5 -1.4 ABC transporter for L-Arginine, permease component 2 (from data) compare
BPHYT_RS13320 -1.5 -0.8 allantoate amidohydrolase compare
BPHYT_RS24205 -1.4 -2.1 aldolase compare
BPHYT_RS07325 -1.4 -0.4 GntR family transcriptional regulator compare
BPHYT_RS11825 -1.4 -0.6 cytosine deaminase compare
BPHYT_RS31760 -1.4 -2.1 aryldialkylphosphatase compare
BPHYT_RS21415 -1.4 -2.5 3-oxoadipate CoA-transferase subunit A compare
BPHYT_RS06990 -1.4 -0.6 membrane protein compare
BPHYT_RS22355 -1.4 -1.1 HAD family hydrolase compare
BPHYT_RS34470 -1.4 -2.5 ABC transporter compare
BPHYT_RS28705 -1.4 -0.9 IclR family transcriptional regulator compare
BPHYT_RS05825 -1.4 -1.3 hypothetical protein compare
BPHYT_RS26375 -1.4 -1.3 ATPase AAA compare
BPHYT_RS09655 -1.4 -3.5 mechanosensitive ion channel protein MscS compare
BPHYT_RS29540 -1.4 -0.7 aldolase compare
BPHYT_RS26775 -1.3 -0.8 chemotaxis protein CheB compare
BPHYT_RS26450 -1.3 -1.7 transcriptional regulator compare
BPHYT_RS21070 -1.3 -1.7 ferredoxin compare
BPHYT_RS34815 -1.3 -0.8 ABC transporter compare
BPHYT_RS10765 -1.3 -1.2 amidase compare
BPHYT_RS29385 -1.3 -2.5 acetyl-CoA acetyltransferase compare
BPHYT_RS09100 -1.3 -5.7 stationary phase survival protein SurE compare
BPHYT_RS17835 -1.3 -1.8 protein tyrosine phosphatase compare
BPHYT_RS11110 -1.3 -2.6 chemotaxis protein CheY compare
BPHYT_RS27405 -1.3 -1.7 aldehyde dehydrogenase compare
BPHYT_RS26385 -1.3 -0.9 glutamine amidotransferase compare
BPHYT_RS25770 -1.3 -0.5 hypothetical protein compare
BPHYT_RS08130 -1.3 -0.9 transposase compare
BPHYT_RS01485 -1.3 -0.9 histidine kinase compare
BPHYT_RS26490 -1.3 -0.5 hypothetical protein compare
BPHYT_RS19335 -1.3 -0.9 hypothetical protein compare
BPHYT_RS27155 -1.3 -0.8 peroxiredoxin compare
BPHYT_RS29610 -1.3 -2.8 cupin compare
BPHYT_RS06345 -1.2 -3.5 sensor histidine kinase compare
BPHYT_RS35835 -1.2 -1.4 hypothetical protein compare
BPHYT_RS23385 -1.2 -0.9 group 1 glycosyl transferase compare
BPHYT_RS11060 -1.2 -0.9 4-hydroxybenzoate 3-monooxygenase compare
BPHYT_RS32225 -1.2 -1.3 hypothetical protein compare
BPHYT_RS21685 -1.2 -1.8 cobalamin biosynthesis protein CobS compare
BPHYT_RS27845 -1.2 -2.1 beta-lactamase compare
BPHYT_RS24220 -1.2 -0.9 alpha/beta hydrolase compare
BPHYT_RS02985 -1.2 -1.5 MaoC family dehydratase compare
BPHYT_RS05065 -1.2 -1.1 DNA mismatch repair protein MutS compare
BPHYT_RS06410 -1.2 -1.5 transcriptional regulator compare
BPHYT_RS27250 -1.2 -0.9 NAD-dependent epimerase/dehydratase compare
BPHYT_RS05005 -1.2 -1.5 hypothetical protein compare
BPHYT_RS29695 -1.2 -1.0 hypothetical protein compare
BPHYT_RS04220 -1.2 -2.6 hypothetical protein compare
BPHYT_RS08525 -1.2 -0.5 SAM-dependent methyltransferase compare
BPHYT_RS28885 -1.2 -0.8 betaine-aldehyde dehydrogenase compare
BPHYT_RS25400 -1.2 -1.6 butyryl-CoA dehydrogenase compare
BPHYT_RS11890 -1.2 -1.6 hypothetical protein compare
BPHYT_RS08490 -1.2 -1.1 Crp/Fnr family transcriptional regulator compare
BPHYT_RS27435 -1.2 -3.0 amylo-alpha-1,6-glucosidase compare
BPHYT_RS10750 -1.2 -0.5 LysR family transcriptional regulator compare
BPHYT_RS23170 -1.2 -1.1 XRE family transcriptional regulator compare
BPHYT_RS31950 -1.1 -1.3 short-chain dehydrogenase compare
BPHYT_RS07095 -1.1 -1.0 LysR family transcriptional regulator compare
BPHYT_RS30450 -1.1 -0.5 ABC transporter permease compare
BPHYT_RS09280 -1.1 -0.5 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS00965 -1.1 -1.5 ArsR family transcriptional regulator compare
BPHYT_RS02285 -1.1 -2.5 cell division protein compare
BPHYT_RS02575 -1.1 -5.5 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS29870 -1.1 -0.8 2-dehydropantoate 2-reductase compare
BPHYT_RS23075 -1.1 -1.6 GntR family transcriptional regulator compare
BPHYT_RS06255 -1.1 -1.6 spore coat protein U compare
BPHYT_RS26280 -1.1 -1.4 hypothetical protein compare
BPHYT_RS20245 -1.1 -2.7 iron ABC transporter substrate-binding protein compare
BPHYT_RS27715 -1.1 -1.0 UspA domain-containing protein compare
BPHYT_RS29865 -1.1 -0.8 sugar transferase compare
BPHYT_RS01975 -1.1 -0.8 hypothetical protein compare
BPHYT_RS03325 -1.1 -2.5 hypothetical protein compare
BPHYT_RS10720 -1.1 -0.8 hypothetical protein compare
BPHYT_RS18515 -1.1 -1.4 hypothetical protein compare
BPHYT_RS22525 -1.1 -2.2 dioxygenase compare
BPHYT_RS06790 -1.1 -5.1 hypothetical protein compare
BPHYT_RS10540 -1.1 -0.6 secretion protein compare
BPHYT_RS23460 -1.1 -0.5 AraC family transcriptional regulator compare
BPHYT_RS17890 -1.1 -0.7 shikimate kinase compare
BPHYT_RS23420 -1.1 -1.8 acetoacetyl-CoA synthase compare
BPHYT_RS05175 -1.1 -1.3 hypothetical protein compare
BPHYT_RS27160 -1.1 -0.7 hypothetical protein compare
BPHYT_RS20925 -1.1 -2.0 dimethylallyltransferase compare
BPHYT_RS02295 -1.1 -2.8 hypothetical protein compare
BPHYT_RS12670 -1.1 -1.4 cell division protein FtsB compare
BPHYT_RS16215 -1.1 -2.0 sensor histidine kinase compare
BPHYT_RS17760 -1.0 -3.4 ABC transporter permease compare
BPHYT_RS13735 -1.0 -1.8 membrane protein compare
BPHYT_RS10160 -1.0 -1.8 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
BPHYT_RS20720 -1.0 -1.9 hypothetical protein compare
BPHYT_RS23675 -1.0 -0.8 lysine transporter LysE compare
BPHYT_RS20990 -1.0 -2.5 phasin compare
BPHYT_RS11170 -1.0 -0.4 hypothetical protein compare
BPHYT_RS26705 -1.0 -1.5 hypothetical protein compare
BPHYT_RS27865 -1.0 -1.5 ATPase compare
BPHYT_RS29015 -1.0 -0.8 RND transporter compare
BPHYT_RS10995 -1.0 -1.0 GntR family transcriptional regulator compare
BPHYT_RS10185 -1.0 -1.1 MarR family transcriptional regulator compare
BPHYT_RS34780 -1.0 -1.4 phytoene synthase compare
BPHYT_RS14040 -1.0 -3.2 universal stress protein UspA compare
BPHYT_RS31680 -1.0 -2.6 dehydrogenase compare
BPHYT_RS30665 -1.0 -1.8 peroxidase compare
BPHYT_RS01730 -1.0 -1.2 serine/threonine protein kinase compare
BPHYT_RS19620 -1.0 -2.2 general secretion pathway protein GspH compare
BPHYT_RS23645 -1.0 -1.1 phosphohydrolase compare
BPHYT_RS26185 -1.0 -0.5 thioesterase compare
BPHYT_RS11765 -1.0 -0.4 polyamine ABC transporter permease compare
BPHYT_RS33630 -1.0 -1.2 chromate transporter compare
BPHYT_RS34655 -1.0 -0.9 2-amino-3-ketobutyrate CoA ligase compare
BPHYT_RS26160 -1.0 -1.3 membrane protein compare
BPHYT_RS32270 -1.0 -1.4 transposase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments