Experiment set39S320 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO10 MOI 1

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS19565 +3.2 19.9 gamma-glutamyl:cysteine ligase compare
BPHYT_RS19570 +3.1 27.2 sodium/hydrogen exchanger compare
BPHYT_RS11705 +3.1 3.0 hypothetical protein compare
BPHYT_RS33820 +3.0 28.8 histidine kinase compare
BPHYT_RS06530 +2.9 2.9 membrane protein compare
BPHYT_RS14140 +2.6 4.8 phosphate transporter permease subunit PstC compare
BPHYT_RS02595 +2.5 3.2 sulfurtransferase compare
BPHYT_RS02905 +2.3 21.4 RNA polymerase subunit sigma-54 compare
BPHYT_RS04945 +2.3 20.1 membrane protein compare
BPHYT_RS05575 +2.3 19.4 Fis family transcriptional regulator compare
BPHYT_RS09330 +2.2 19.2 phytoene synthase compare
BPHYT_RS33920 +2.2 16.3 type II citrate synthase compare
BPHYT_RS04950 +2.2 16.4 hypothetical protein compare
BPHYT_RS05590 +2.1 16.2 trehalose-6-phosphate synthase compare
BPHYT_RS06175 +2.0 5.1 LPS biosynthesis compare
BPHYT_RS12845 +2.0 16.1 ATPase compare
BPHYT_RS25935 +2.0 1.5 type III secretion protein compare
BPHYT_RS06075 +2.0 14.0 hypothetical protein compare
BPHYT_RS05155 +2.0 10.3 acetyltransferase GCN5 compare
BPHYT_RS05560 +2.0 10.6 Fis family transcriptional regulator compare
BPHYT_RS04965 +1.9 12.9 ATP-binding protein compare
BPHYT_RS04285 +1.9 1.0 rhamnosyltransferase compare
BPHYT_RS27370 +1.8 2.7 CoA transferase compare
BPHYT_RS09500 +1.8 6.2 glucose-6-phosphate isomerase compare
BPHYT_RS03725 +1.8 1.4 serine hydroxymethyltransferase compare
BPHYT_RS13645 +1.8 16.5 threonine--tRNA ligase compare
BPHYT_RS12725 +1.8 15.4 regulator compare
BPHYT_RS29620 +1.8 2.0 hypothetical protein compare
BPHYT_RS18655 +1.8 9.0 3-oxoacyl-ACP synthase compare
BPHYT_RS29520 +1.8 1.6 hypothetical protein compare
BPHYT_RS14400 +1.7 4.9 anti-sigma factor compare
BPHYT_RS16335 +1.7 4.9 membrane protein compare
BPHYT_RS11170 +1.6 1.3 hypothetical protein compare
BPHYT_RS23910 +1.6 4.0 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS14395 +1.6 7.9 sugar dehydratase compare
BPHYT_RS07840 +1.6 1.9 muconate cycloisomerase compare
BPHYT_RS06985 +1.5 9.1 fumarate hydratase compare
BPHYT_RS04940 +1.5 1.9 hypothetical protein compare
BPHYT_RS09660 +1.5 8.0 trehalose-6-phosphate synthase compare
BPHYT_RS27890 +1.5 0.7 hypothetical protein compare
BPHYT_RS31615 +1.5 1.9 thiamine pyrophosphate protein compare
BPHYT_RS12150 +1.4 10.1 PII uridylyl-transferase compare
BPHYT_RS17035 +1.4 1.7 sugar kinase compare
BPHYT_RS01630 +1.4 1.2 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS08945 +1.4 6.9 hypothetical protein compare
BPHYT_RS05610 +1.4 8.8 DNA-cytosine methyltransferase compare
BPHYT_RS12990 +1.4 3.3 iron transporter compare
BPHYT_RS23395 +1.4 2.1 glycosyl transferase compare
BPHYT_RS02640 +1.4 9.4 cytochrome C oxidase compare
BPHYT_RS14145 +1.4 7.8 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS12985 +1.4 1.4 amino acid acetyltransferase compare
BPHYT_RS08850 +1.3 0.6 transcriptional regulator compare
BPHYT_RS14855 +1.3 0.5 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS12590 +1.3 1.7 dual-specificity RNA methyltransferase RlmN compare
BPHYT_RS15620 +1.3 4.0 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS05320 +1.3 1.9 beta-lactamase compare
BPHYT_RS10040 +1.3 1.6 hypothetical protein compare
BPHYT_RS16390 +1.3 4.7 MarR family transcriptional regulator compare
BPHYT_RS02540 +1.3 3.2 hypothetical protein compare
BPHYT_RS02525 +1.3 6.9 membrane protein compare
BPHYT_RS14485 +1.3 5.2 ribonuclease E compare
BPHYT_RS09815 +1.2 1.6 malate synthase compare
BPHYT_RS09860 +1.2 1.0 pilus assembly protein PilP compare
BPHYT_RS05585 +1.2 5.0 hypothetical protein compare
BPHYT_RS28535 +1.2 1.3 response regulator receiver compare
BPHYT_RS33695 +1.2 1.2 molybdenum ABC transporter ATPase compare
BPHYT_RS34185 +1.2 3.9 cold-shock protein compare
BPHYT_RS32960 +1.2 3.3 short-chain dehydrogenase compare
BPHYT_RS28670 +1.2 1.8 MFS transporter compare
BPHYT_RS17905 +1.2 2.7 fimbrial assembly family protein compare
BPHYT_RS19920 +1.2 1.7 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS04290 +1.2 0.6 glycosyl transferase family 2 compare
BPHYT_RS06500 +1.2 1.7 LOG family protein compare
BPHYT_RS03455 +1.2 1.7 paraquat-inducible protein A compare
BPHYT_RS34025 +1.2 1.5 hypothetical protein compare
BPHYT_RS33400 +1.2 4.1 magnesium transporter CorA compare
BPHYT_RS25270 +1.2 2.4 multidrug MFS transporter compare
BPHYT_RS05615 +1.2 1.1 hypothetical protein compare
BPHYT_RS02530 +1.2 7.7 hypothetical protein compare
BPHYT_RS34485 +1.1 2.5 diguanylate phosphodiesterase compare
BPHYT_RS20095 +1.1 1.2 transcriptional regulator compare
BPHYT_RS02635 +1.1 6.2 membrane protein compare
BPHYT_RS26930 +1.1 4.8 mechanosensitive ion channel protein compare
BPHYT_RS06065 +1.1 5.7 cytochrome C compare
BPHYT_RS02865 +1.1 0.7 hypothetical protein compare
BPHYT_RS18600 +1.1 1.9 glutathione S-transferase compare
BPHYT_RS25770 +1.1 0.8 hypothetical protein compare
BPHYT_RS09640 +1.1 4.7 DNAase compare
BPHYT_RS34035 +1.1 1.7 type II and III secretion system outermembrane protein, secretin compare
BPHYT_RS05255 +1.1 1.3 phage abortive infection protein compare
BPHYT_RS27230 +1.1 1.0 hypothetical protein compare
BPHYT_RS03620 +1.1 6.3 poly(A) polymerase compare
BPHYT_RS27305 +1.1 1.0 hypothetical protein compare
BPHYT_RS06070 +1.1 6.5 cytochrome C compare
BPHYT_RS01960 +1.1 5.3 cytochrome C compare
BPHYT_RS26025 +1.1 0.6 hypothetical protein compare
BPHYT_RS16675 +1.1 1.2 dihydroorotase compare
BPHYT_RS15415 +1.1 6.8 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS13555 +1.1 1.7 acyl-CoA dehydrogenase compare
BPHYT_RS26300 +1.1 1.1 ATP-dependent DNA ligase compare
BPHYT_RS02665 +1.1 7.5 MFS transporter compare
BPHYT_RS21025 +1.1 1.2 cation-binding protein compare
BPHYT_RS05670 +1.1 2.1 hypothetical protein compare
BPHYT_RS24095 +1.1 2.9 membrane protein compare
BPHYT_RS13610 +1.1 1.7 MerR family transcriptional regulator compare
BPHYT_RS13200 +1.0 2.1 molybdopterin binding oxidoreductase compare
BPHYT_RS17945 +1.0 2.7 cytochrome C biogenesis protein compare
BPHYT_RS28025 +1.0 1.5 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS24975 +1.0 2.1 RNA polymerase sigma24 factor compare
BPHYT_RS07255 +1.0 1.5 4-oxalocrotonate decarboxylase compare
BPHYT_RS27785 +1.0 1.7 hypothetical protein compare
BPHYT_RS28595 +1.0 1.0 glyoxalase compare
BPHYT_RS16430 +1.0 8.8 cytochrome C compare
BPHYT_RS31400 +1.0 1.4 methyl-accepting chemotaxis protein compare
BPHYT_RS34850 +1.0 1.7 acylphosphatase compare
BPHYT_RS05850 +1.0 1.7 hypothetical protein compare
BPHYT_RS31515 +1.0 1.4 agmatinase compare
BPHYT_RS03410 +1.0 1.4 queuine tRNA-ribosyltransferase compare
BPHYT_RS22815 +1.0 1.8 TonB-denpendent receptor compare
BPHYT_RS02685 +1.0 6.0 cytochrome C oxidase subunit I compare
BPHYT_RS02650 +1.0 2.5 membrane protein compare
BPHYT_RS16175 +1.0 0.6 hemolysin D compare
BPHYT_RS20115 +1.0 1.0 transcriptional regulator compare
BPHYT_RS26910 +1.0 1.4 hypothetical protein compare
BPHYT_RS34295 +1.0 1.1 fimbrial protein compare
BPHYT_RS08510 +1.0 1.7 acyl-CoA dehydrogenase compare
BPHYT_RS04015 +1.0 1.8 glycosyl transferase compare
BPHYT_RS14175 +1.0 2.8 RNA-binding protein compare
BPHYT_RS23460 +1.0 0.7 AraC family transcriptional regulator compare
BPHYT_RS24270 +0.9 1.4 C4-dicarboxylate ABC transporter substrate-binding protein compare
BPHYT_RS10315 +0.9 2.2 MFS transporter compare
BPHYT_RS26510 +0.9 0.9 transcriptional regulator compare
BPHYT_RS08125 +0.9 5.6 ATPase compare
BPHYT_RS24105 +0.9 2.3 chloroperoxidase compare
BPHYT_RS28505 +0.9 1.4 5-deoxyglucuronate isomerase compare
BPHYT_RS02010 +0.9 1.8 copper homeostasis protein CutC compare
BPHYT_RS02005 +0.9 1.4 diguanylate phosphodiesterase compare
BPHYT_RS26040 +0.9 1.8 cysteine hydrolase compare
BPHYT_RS14195 +0.9 1.4 carbamoyl phosphate synthase small subunit compare
BPHYT_RS10675 +0.9 1.1 muconate cycloisomerase compare
BPHYT_RS23155 +0.9 1.1 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS34280 +0.9 2.8 hypothetical protein compare
BPHYT_RS11555 +0.9 1.5 allantoinase compare
BPHYT_RS00980 +0.9 0.7 GCN5 family acetyltransferase compare
BPHYT_RS13290 +0.9 3.0 cysteine ABC transporter permease compare
BPHYT_RS04720 +0.9 4.4 transcriptional regulator compare
BPHYT_RS12815 +0.9 3.3 IclR family transcriptional regulator compare
BPHYT_RS33240 +0.9 1.3 membrane protein compare
BPHYT_RS21475 +0.9 1.1 hypothetical protein compare
BPHYT_RS09160 +0.9 3.2 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS14340 +0.9 5.1 Fis family transcriptional regulator compare
BPHYT_RS26780 +0.9 3.4 chemotaxis protein CheR compare
BPHYT_RS22820 +0.9 2.0 hydrolase compare
BPHYT_RS09260 +0.9 1.8 histidine kinase compare
BPHYT_RS09145 +0.9 5.5 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS15335 +0.9 6.0 coproporphyrinogen III oxidase compare
BPHYT_RS10320 +0.9 3.8 hypothetical protein compare
BPHYT_RS13765 +0.9 3.7 LysR family transcriptional regulator compare
BPHYT_RS34495 +0.9 2.1 phenol degradation protein meta compare
BPHYT_RS27850 +0.9 1.0 hemerythrin compare
BPHYT_RS21870 +0.9 1.5 hypothetical protein compare
BPHYT_RS23615 +0.9 2.9 XRE family transcriptional regulator compare
BPHYT_RS10345 +0.9 1.0 flagellar motor protein MotB compare
BPHYT_RS14845 +0.9 0.5 cysteine synthase compare
BPHYT_RS11895 +0.9 1.5 peroxiredoxin compare
BPHYT_RS16435 +0.9 7.2 alcohol dehydrogenase compare
BPHYT_RS16210 +0.9 2.1 peptidase compare
BPHYT_RS05025 +0.9 1.1 sugar ABC transporter substrate-binding protein compare
BPHYT_RS12635 +0.9 2.1 translation factor Sua5 compare
BPHYT_RS16060 +0.9 1.7 ribonucleotide-diphosphate reductase subunit alpha compare
BPHYT_RS08600 +0.9 1.4 hypothetical protein compare
BPHYT_RS08135 +0.9 1.1 hypothetical protein compare
BPHYT_RS23065 +0.9 2.0 MFS transporter compare
BPHYT_RS10285 +0.8 1.6 hypothetical protein compare
BPHYT_RS25080 +0.8 0.8 glycine/betaine ABC transporter substrate-binding protein compare
BPHYT_RS04140 +0.8 3.3 polysaccharide biosynthesis protein compare
BPHYT_RS25395 +0.8 1.3 3-oxoacyl-ACP reductase compare
BPHYT_RS10165 +0.8 0.5 transcriptional regulator compare
BPHYT_RS22455 +0.8 0.6 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS03625 +0.8 3.6 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS29720 +0.8 1.1 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS12840 +0.8 2.0 pyruvate dehydrogenase compare
BPHYT_RS17920 +0.8 1.2 protein CyaY compare
BPHYT_RS26320 +0.8 2.5 ATPase compare
BPHYT_RS10750 +0.8 0.6 LysR family transcriptional regulator compare
BPHYT_RS27495 +0.8 0.6 hypothetical protein compare
BPHYT_RS36400 +0.8 1.0 hypothetical protein compare
BPHYT_RS31040 +0.8 1.9 sugar transporter compare
BPHYT_RS20670 +0.8 2.6 carbon-nitrogen hydrolase compare
BPHYT_RS27195 +0.8 2.2 LacI family transcriptional regulator compare
BPHYT_RS36600 +0.8 1.1 lytic transglycosylase compare
BPHYT_RS34680 +0.8 3.5 hypothetical protein compare
BPHYT_RS32155 +0.8 2.0 type IV secretion system protein VirB11 compare
BPHYT_RS28520 +0.8 1.4 hypothetical protein compare
BPHYT_RS04910 +0.8 0.9 phenylacetic acid degradation protein compare
BPHYT_RS25075 +0.8 1.4 AraC family transcriptional regulator compare
BPHYT_RS00340 +0.8 2.8 hypothetical protein compare
BPHYT_RS21910 +0.8 1.6 ABC transporter permease compare
BPHYT_RS01435 +0.8 7.2 LysR family transcriptional regulator compare
BPHYT_RS17490 +0.8 1.5 haloacid dehalogenase compare


Specific Phenotypes

For 1 genes in this experiment