Experiment set39S318 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO10 MOI 10

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS33820 +2.7 25.5 histidine kinase compare
BPHYT_RS14140 +2.5 5.1 phosphate transporter permease subunit PstC compare
BPHYT_RS06175 +2.3 6.7 LPS biosynthesis compare
BPHYT_RS05575 +2.3 19.8 Fis family transcriptional regulator compare
BPHYT_RS14400 +2.2 6.9 anti-sigma factor compare
BPHYT_RS25935 +2.1 1.5 type III secretion protein compare
BPHYT_RS05560 +2.1 13.7 Fis family transcriptional regulator compare
BPHYT_RS05590 +2.1 17.8 trehalose-6-phosphate synthase compare
BPHYT_RS11705 +2.0 2.0 hypothetical protein compare
BPHYT_RS04945 +2.0 17.5 membrane protein compare
BPHYT_RS09330 +1.9 17.1 phytoene synthase compare
BPHYT_RS23910 +1.9 8.3 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS18655 +1.9 9.4 3-oxoacyl-ACP synthase compare
BPHYT_RS14395 +1.9 10.9 sugar dehydratase compare
BPHYT_RS04950 +1.9 14.8 hypothetical protein compare
BPHYT_RS26025 +1.8 1.2 hypothetical protein compare
BPHYT_RS12845 +1.8 14.7 ATPase compare
BPHYT_RS03455 +1.8 2.6 paraquat-inducible protein A compare
BPHYT_RS19565 +1.8 12.1 gamma-glutamyl:cysteine ligase compare
BPHYT_RS15075 +1.8 1.4 dihydrokaempferol 4-reductase compare
BPHYT_RS19570 +1.7 13.7 sodium/hydrogen exchanger compare
BPHYT_RS02435 +1.7 3.6 hypothetical protein compare
BPHYT_RS02595 +1.7 2.6 sulfurtransferase compare
BPHYT_RS33920 +1.7 12.2 type II citrate synthase compare
BPHYT_RS08850 +1.7 0.7 transcriptional regulator compare
BPHYT_RS01435 +1.7 14.5 LysR family transcriptional regulator compare
BPHYT_RS09500 +1.7 5.7 glucose-6-phosphate isomerase compare
BPHYT_RS06985 +1.7 13.6 fumarate hydratase compare
BPHYT_RS06610 +1.7 1.5 triosephosphate isomerase compare
BPHYT_RS14855 +1.7 0.6 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS04940 +1.7 3.2 hypothetical protein compare
BPHYT_RS02905 +1.6 14.3 RNA polymerase subunit sigma-54 compare
BPHYT_RS06075 +1.6 11.4 hypothetical protein compare
BPHYT_RS12725 +1.6 13.3 regulator compare
BPHYT_RS23455 +1.6 1.7 phosphorylase compare
BPHYT_RS36275 +1.6 1.5 hypothetical protein compare
BPHYT_RS02975 +1.5 2.1 membrane protein compare
BPHYT_RS05155 +1.5 8.3 acetyltransferase GCN5 compare
BPHYT_RS09660 +1.5 8.5 trehalose-6-phosphate synthase compare
BPHYT_RS02865 +1.5 0.9 hypothetical protein compare
BPHYT_RS10065 +1.5 1.4 cytochrome C oxidase subunit I compare
BPHYT_RS04290 +1.5 0.7 glycosyl transferase family 2 compare
BPHYT_RS12985 +1.4 1.5 amino acid acetyltransferase compare
BPHYT_RS26300 +1.4 1.8 ATP-dependent DNA ligase compare
BPHYT_RS12150 +1.4 10.5 PII uridylyl-transferase compare
BPHYT_RS07255 +1.4 2.1 4-oxalocrotonate decarboxylase compare
BPHYT_RS04335 +1.4 1.0 membrane protein compare
BPHYT_RS04285 +1.4 0.6 rhamnosyltransferase compare
BPHYT_RS21905 +1.4 1.0 IclR family transcriptional regulator compare
BPHYT_RS08545 +1.4 1.1 oxidoreductase compare
BPHYT_RS15145 +1.3 3.3 3-oxoacyl-ACP synthase compare
BPHYT_RS28830 +1.3 1.0 LysR family transcriptional regulator compare
BPHYT_RS02530 +1.3 7.4 hypothetical protein compare
BPHYT_RS28535 +1.3 1.3 response regulator receiver compare
BPHYT_RS13610 +1.3 1.6 MerR family transcriptional regulator compare
BPHYT_RS08945 +1.3 6.1 hypothetical protein compare
BPHYT_RS28595 +1.3 1.3 glyoxalase compare
BPHYT_RS16335 +1.3 3.3 membrane protein compare
BPHYT_RS05585 +1.3 5.0 hypothetical protein compare
BPHYT_RS16175 +1.2 0.7 hemolysin D compare
BPHYT_RS17035 +1.2 1.1 sugar kinase compare
BPHYT_RS20665 +1.2 0.8 LysR family transcriptional regulator compare
BPHYT_RS12990 +1.2 3.1 iron transporter compare
BPHYT_RS04385 +1.2 2.0 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS36000 +1.2 1.8 hypothetical protein compare
BPHYT_RS36090 +1.2 1.8 hypothetical protein compare
BPHYT_RS23460 +1.2 0.9 AraC family transcriptional regulator compare
BPHYT_RS06685 +1.2 3.3 NADH:ubiquinone oxidoreductase subunit M compare
BPHYT_RS20070 +1.2 1.3 hypothetical protein compare
BPHYT_RS11040 +1.2 2.0 GntR family transcriptional regulator compare
BPHYT_RS32960 +1.2 2.4 short-chain dehydrogenase compare
BPHYT_RS33515 +1.2 5.9 porin compare
BPHYT_RS29365 +1.2 1.6 ATP-NAD kinase compare
BPHYT_RS14145 +1.2 6.0 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS14845 +1.2 0.7 cysteine synthase compare
BPHYT_RS29745 +1.1 1.3 phosphonopyruvate decarboxylase compare
BPHYT_RS26570 +1.1 1.1 5'-nucleotidase compare
BPHYT_RS28670 +1.1 2.7 MFS transporter compare
BPHYT_RS27060 +1.1 1.2 photosystem reaction center subunit H compare
BPHYT_RS04315 +1.1 5.1 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS22860 +1.1 1.3 chemotaxis protein CheY compare
BPHYT_RS18600 +1.1 1.9 glutathione S-transferase compare
BPHYT_RS34185 +1.1 2.9 cold-shock protein compare
BPHYT_RS16675 +1.1 1.1 dihydroorotase compare
BPHYT_RS30365 +1.1 1.4 beta-lactamase compare
BPHYT_RS16430 +1.1 9.7 cytochrome C compare
BPHYT_RS26485 +1.1 3.8 aldo/keto reductase compare
BPHYT_RS02640 +1.1 7.5 cytochrome C oxidase compare
BPHYT_RS28285 +1.1 1.9 MFS transporter compare
BPHYT_RS02540 +1.1 2.3 hypothetical protein compare
BPHYT_RS09650 +1.1 0.9 hypothetical protein compare
BPHYT_RS15170 +1.1 3.6 family 2 glycosyl transferase compare
BPHYT_RS04015 +1.1 2.1 glycosyl transferase compare
BPHYT_RS30880 +1.0 3.3 peptidase S13 compare
BPHYT_RS28660 +1.0 1.2 polyvinylalcohol dehydrogenase compare
BPHYT_RS29250 +1.0 2.5 dihydrodipicolinate synthase compare
BPHYT_RS03450 +1.0 3.7 paraquat-inducible protein A compare
BPHYT_RS33150 +1.0 1.1 beta-lactamase compare
BPHYT_RS33695 +1.0 1.8 molybdenum ABC transporter ATPase compare
BPHYT_RS19770 +1.0 2.9 ArsR family transcriptional regulator compare
BPHYT_RS14135 +1.0 4.9 phosphate transporter permease subunit PtsA compare
BPHYT_RS02665 +1.0 6.6 MFS transporter compare
BPHYT_RS35310 +1.0 1.4 GCN5 family N-acetyltransferase compare
BPHYT_RS18635 +1.0 2.4 LamB/YcsF family protein compare
BPHYT_RS11555 +1.0 2.1 allantoinase compare
BPHYT_RS03725 +1.0 0.5 serine hydroxymethyltransferase compare
BPHYT_RS17640 +1.0 0.7 2-alkenal reductase compare
BPHYT_RS07570 +1.0 1.0 hypothetical protein compare
BPHYT_RS11100 +1.0 2.3 methyltransferase compare
BPHYT_RS14740 +1.0 5.1 threonine-phosphate decarboxylase compare
BPHYT_RS15620 +1.0 3.1 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS35100 +1.0 1.2 ABC transporter substrate-binding protein compare
BPHYT_RS04890 +1.0 1.2 cobalamin biosynthesis protein CobD compare
BPHYT_RS02525 +1.0 5.2 membrane protein compare
BPHYT_RS08125 +1.0 5.1 ATPase compare
BPHYT_RS20055 +1.0 1.8 hypothetical protein compare
BPHYT_RS09640 +1.0 4.0 DNAase compare
BPHYT_RS33240 +1.0 1.5 membrane protein compare
BPHYT_RS09145 +1.0 5.9 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS14340 +1.0 6.0 Fis family transcriptional regulator compare
BPHYT_RS09480 +1.0 0.4 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS07840 +1.0 2.0 muconate cycloisomerase compare
BPHYT_RS15200 +1.0 3.4 hypothetical protein compare
BPHYT_RS09815 +1.0 2.3 malate synthase compare
BPHYT_RS06910 +1.0 2.5 membrane protein compare
BPHYT_RS25340 +1.0 1.4 sulfatase compare
BPHYT_RS01960 +0.9 2.6 cytochrome C compare
BPHYT_RS10570 +0.9 1.7 LysR family transcriptional regulator compare
BPHYT_RS12615 +0.9 0.5 dihydrodipicolinate synthase compare
BPHYT_RS01455 +0.9 0.9 peptide deformylase compare
BPHYT_RS16840 +0.9 1.9 transketolase compare
BPHYT_RS36140 +0.9 3.3 hypothetical protein compare
BPHYT_RS31225 +0.9 1.4 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS26040 +0.9 1.8 cysteine hydrolase compare
BPHYT_RS16435 +0.9 7.5 alcohol dehydrogenase compare
BPHYT_RS22060 +0.9 7.3 amino acid transporter compare
BPHYT_RS34295 +0.9 1.0 fimbrial protein compare
BPHYT_RS17885 +0.9 2.6 3-dehydroquinate synthase compare
BPHYT_RS12550 +0.9 0.5 GTP-binding protein HflX compare
BPHYT_RS02035 +0.9 2.2 hypothetical protein compare
BPHYT_RS06065 +0.9 5.6 cytochrome C compare
BPHYT_RS21340 +0.9 2.0 2OG-Fe(II) oxygenase compare
BPHYT_RS03470 +0.9 4.6 LysR family transcriptional regulator compare
BPHYT_RS15155 +0.9 3.6 hypothetical protein compare
BPHYT_RS15175 +0.9 4.6 AMP-dependent synthetase compare
BPHYT_RS17290 +0.9 6.2 porin compare
BPHYT_RS28985 +0.9 2.3 hypothetical protein compare
BPHYT_RS10095 +0.9 1.0 integrase compare
BPHYT_RS20170 +0.9 1.6 sugar transporter compare
BPHYT_RS06085 +0.9 2.8 ferredoxin compare
BPHYT_RS13645 +0.9 7.4 threonine--tRNA ligase compare
BPHYT_RS02635 +0.9 5.4 membrane protein compare
BPHYT_RS10145 +0.9 3.4 Mn-containing catalase compare
BPHYT_RS01630 +0.9 0.7 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS27735 +0.9 1.5 nitroreductase compare
BPHYT_RS31615 +0.9 1.4 thiamine pyrophosphate protein compare
BPHYT_RS15415 +0.9 5.5 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS28470 +0.9 0.7 hypothetical protein compare
BPHYT_RS03520 +0.9 2.1 ATP--cobalamin adenosyltransferase compare
BPHYT_RS06070 +0.9 4.3 cytochrome C compare
BPHYT_RS33805 +0.9 0.8 hypothetical protein compare
BPHYT_RS05330 +0.9 1.8 phosphohydrolase compare
BPHYT_RS23930 +0.9 1.1 triphosphoribosyl-dephospho-CoA synthase compare
BPHYT_RS26390 +0.8 0.7 antibiotic resistance protein compare
BPHYT_RS17890 +0.8 0.8 shikimate kinase compare
BPHYT_RS30870 +0.8 1.8 chromate transporter compare
BPHYT_RS24135 +0.8 1.4 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS02650 +0.8 2.0 membrane protein compare
BPHYT_RS11020 +0.8 1.6 transporter compare
BPHYT_RS23395 +0.8 1.1 glycosyl transferase compare
BPHYT_RS26855 +0.8 1.4 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS02685 +0.8 5.4 cytochrome C oxidase subunit I compare
BPHYT_RS23270 +0.8 0.9 enoyl-CoA hydratase compare
BPHYT_RS14505 +0.8 0.8 membrane protein compare
BPHYT_RS24525 +0.8 1.8 2-hydroxyacid dehydrogenase compare
BPHYT_RS08995 +0.8 0.6 hypothetical protein compare
BPHYT_RS32200 +0.8 1.1 lytic transglycosylase compare
BPHYT_RS29410 +0.8 3.2 HPr kinase compare
BPHYT_RS26470 +0.8 0.6 MFS transporter compare
BPHYT_RS18990 +0.8 2.0 chemotaxis protein compare
BPHYT_RS14130 +0.8 3.2 phosphate ABC transporter ATP-binding protein compare
BPHYT_RS16340 +0.8 3.4 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS35850 +0.8 2.9 hypothetical protein compare
BPHYT_RS17905 +0.8 1.3 fimbrial assembly family protein compare
BPHYT_RS22455 +0.8 0.6 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS36470 +0.8 0.8 hypothetical protein compare
BPHYT_RS25955 +0.8 0.8 transcriptional regulator compare
BPHYT_RS33400 +0.8 2.2 magnesium transporter CorA compare
BPHYT_RS20185 +0.8 1.2 sugar transferase compare
BPHYT_RS00350 +0.8 1.1 hypothetical protein compare
BPHYT_RS16060 +0.8 2.2 ribonucleotide-diphosphate reductase subunit alpha compare
BPHYT_RS10250 +0.8 2.7 inosine-5-monophosphate dehydrogenase compare
BPHYT_RS06195 +0.8 0.9 membrane protein compare
BPHYT_RS26285 +0.8 1.3 glycogen debranching protein compare
BPHYT_RS10320 +0.8 2.0 hypothetical protein compare
BPHYT_RS05615 +0.8 1.0 hypothetical protein compare
BPHYT_RS06455 +0.8 1.6 potassium-transporting ATPase C chain compare
BPHYT_RS15135 +0.8 2.7 3-ketoacyl-ACP reductase compare
BPHYT_RS09810 +0.8 2.3 hypothetical protein compare
BPHYT_RS09270 +0.8 4.6 histidine kinase compare


Specific Phenotypes

For 2 genes in this experiment