Experiment set39S307 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO3 MOI 10

200 most important genes:

  gene name fitness t score description  
BPHYT_RS01485 -4.6 -1.1 histidine kinase compare
BPHYT_RS27160 -4.4 -1.1 hypothetical protein compare
BPHYT_RS26305 -4.3 -1.4 exonuclease compare
BPHYT_RS15890 -4.0 -0.9 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS11125 -3.9 -0.9 alkylhydroperoxidase compare
BPHYT_RS26660 -3.7 -2.2 precorrin-4 C11-methyltransferase compare
BPHYT_RS30775 -3.6 -1.2 gluconate 2-dehydrogenase compare
BPHYT_RS11745 -3.6 -0.9 (2Fe-2S)-binding protein compare
BPHYT_RS10740 -3.5 -0.8 LuxR family transcriptional regulator compare
BPHYT_RS02180 -3.5 -1.4 hypothetical protein compare
BPHYT_RS09565 -3.5 -1.2 acetyl-CoA acetyltransferase compare
BPHYT_RS36385 -3.4 -0.8 TetR family transcriptional regulator compare
BPHYT_RS23600 -3.4 -1.7 hypothetical protein compare
BPHYT_RS10645 -3.3 -0.8 cyanate hydratase compare
BPHYT_RS11685 -3.3 -0.8 phasin family protein compare
BPHYT_RS03645 -3.3 -2.1 tRNA dimethylallyltransferase compare
BPHYT_RS04630 -3.3 -2.1 amino acid ABC transporter permease compare
BPHYT_RS09695 -3.3 -1.1 hypothetical protein compare
BPHYT_RS34085 -3.2 -1.8 polyamine ABC transporter permease compare
BPHYT_RS14550 -3.2 -0.8 tRNA-Asn compare
BPHYT_RS34810 -3.2 -2.1 RND transporter compare
BPHYT_RS32395 -3.2 -0.7 hypothetical protein compare
BPHYT_RS28840 -3.1 -1.9 oxidoreductase compare
BPHYT_RS09920 -3.1 -1.4 amino acid permease compare
BPHYT_RS28300 -3.1 -0.7 histone nucleoid-structuring protein H-NS compare
BPHYT_RS26080 -3.0 -0.7 ABC transporter ATPase compare
BPHYT_RS23740 -3.0 -4.0 AraC family transcriptional regulator compare
BPHYT_RS31050 -3.0 -0.7 epimerase compare
BPHYT_RS32210 -3.0 -1.0 hypothetical protein compare
BPHYT_RS33130 -3.0 -2.6 transcriptional regulator compare
BPHYT_RS08525 -2.9 -0.7 SAM-dependent methyltransferase compare
BPHYT_RS10750 -2.9 -0.7 LysR family transcriptional regulator compare
BPHYT_RS09860 -2.9 -0.7 pilus assembly protein PilP compare
BPHYT_RS17095 -2.9 -3.0 proline--tRNA ligase compare
BPHYT_RS30795 -2.9 -0.9 short-chain dehydrogenase compare
BPHYT_RS09280 -2.9 -0.7 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS14865 -2.9 -1.2 UDP-glucose 6-dehydrogenase compare
BPHYT_RS23650 -2.8 -0.7 hypothetical protein compare
BPHYT_RS12925 -2.8 -0.7 exodeoxyribonuclease III compare
BPHYT_RS21770 -2.8 -1.5 aldehyde dehydrogenase compare
BPHYT_RS18590 -2.8 -0.7 hypothetical protein compare
BPHYT_RS03015 -2.8 -0.9 aldolase compare
BPHYT_RS22860 -2.8 -0.9 chemotaxis protein CheY compare
BPHYT_RS22205 -2.8 -2.1 hypothetical protein compare
BPHYT_RS22940 -2.8 -1.1 pilus assembly protein TadE compare
BPHYT_RS33225 -2.7 -7.3 NAD-dependent epimerase/dehydratase compare
BPHYT_RS05825 -2.7 -1.3 hypothetical protein compare
BPHYT_RS11765 -2.7 -0.6 polyamine ABC transporter permease compare
BPHYT_RS24315 -2.7 -1.1 phosphoribosyltransferase compare
BPHYT_RS02365 -2.7 -1.1 hypothetical protein compare
BPHYT_RS28680 -2.7 -1.6 porin compare
BPHYT_RS31515 -2.7 -1.8 agmatinase compare
BPHYT_RS31730 -2.7 -2.3 aminotransferase class III compare
BPHYT_RS14060 -2.6 -1.1 peptidase M23 compare
BPHYT_RS33765 -2.6 -0.6 membrane protein compare
BPHYT_RS30725 -2.6 -1.4 hypothetical protein compare
BPHYT_RS02135 -2.5 -1.5 glyoxylate reductase compare
BPHYT_RS05440 -2.5 -2.2 hypothetical protein compare
BPHYT_RS10925 -2.5 -1.6 aldehyde dehydrogenase compare
BPHYT_RS12265 -2.4 -0.7 alanine acetyltransferase compare
BPHYT_RS21385 -2.4 -1.0 short-chain dehydrogenase compare
BPHYT_RS08235 -2.3 -0.5 nucleoprotein, Hfg, host factor I compare
BPHYT_RS29750 -2.3 -1.5 phosphoenolpyruvate phosphomutase compare
BPHYT_RS30720 -2.3 -1.3 hypothetical protein compare
BPHYT_RS13080 -2.3 -1.0 hypothetical protein compare
BPHYT_RS28910 -2.2 -1.3 diguanylate phosphodiesterase compare
BPHYT_RS22910 -2.2 -0.5 hypothetical protein compare
BPHYT_RS02760 -2.2 -0.7 cytochrome BD oxidase subunit II compare
BPHYT_RS29485 -2.2 -1.1 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS03410 -2.2 -1.4 queuine tRNA-ribosyltransferase compare
BPHYT_RS26740 -2.1 -0.9 hypothetical protein compare
BPHYT_RS24500 -2.1 -0.7 histidine kinase compare
BPHYT_RS36130 -2.1 -1.0 hypothetical protein compare
BPHYT_RS27455 -2.1 -0.7 rod shape-determining protein MreB compare
BPHYT_RS23770 -2.1 -0.9 GntR family transcriptional regulator compare
BPHYT_RS13385 -2.1 -1.6 hypothetical protein compare
BPHYT_RS15285 -2.1 -2.1 transcription elongation factor GreB compare
BPHYT_RS27715 -2.1 -1.1 UspA domain-containing protein compare
BPHYT_RS28485 -2.0 -0.5 GntR family transcriptional regulator compare
BPHYT_RS12615 -2.0 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS09465 -2.0 -1.1 transcriptional regulator compare
BPHYT_RS26185 -2.0 -0.7 thioesterase compare
BPHYT_RS25875 -2.0 -0.7 type III secretion protein compare
BPHYT_RS06320 -1.9 -0.6 chemotaxis protein CheY compare
BPHYT_RS10065 -1.9 -0.8 cytochrome C oxidase subunit I compare
BPHYT_RS23675 -1.9 -0.9 lysine transporter LysE compare
BPHYT_RS11930 -1.9 -1.0 3-hydroxybutyrate dehydrogenase compare
BPHYT_RS32785 -1.9 -2.8 membrane protein compare
BPHYT_RS06550 -1.9 -1.2 acetolactate synthase compare
BPHYT_RS24540 -1.9 -1.8 DMSO reductase compare
BPHYT_RS32815 -1.9 -1.6 sugar ABC transporter compare
BPHYT_RS22930 -1.9 -0.6 type II secretion system protein compare
BPHYT_RS08965 -1.9 -1.7 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS24210 -1.8 -1.9 urea transporter compare
BPHYT_RS27920 -1.8 -0.6 tricarballylate utilization protein B compare
BPHYT_RS30800 -1.8 -0.8 MFS transporter compare
BPHYT_RS20235 -1.8 -3.7 iron ABC transporter compare
BPHYT_RS26925 -1.8 -1.0 NIPSNAP family containing protein compare
BPHYT_RS10100 -1.8 -2.1 dihydroxy-acid dehydratase compare
BPHYT_RS24105 -1.8 -1.7 chloroperoxidase compare
BPHYT_RS26555 -1.8 -1.4 multidrug MFS transporter compare
BPHYT_RS34815 -1.8 -0.8 ABC transporter compare
BPHYT_RS29810 -1.8 -0.7 hexapeptide transferase compare
BPHYT_RS04625 -1.8 -1.5 urea ABC transporter ATP-binding protein compare
BPHYT_RS17240 -1.8 -0.4 cell division protein FtsW compare
BPHYT_RS19660 -1.8 -0.9 hypothetical protein compare
BPHYT_RS21620 -1.8 -0.8 GCN5 family acetyltransferase compare
BPHYT_RS19890 -1.8 -1.3 hypothetical protein compare
BPHYT_RS26685 -1.7 -0.6 precorrin-8X methylmutase compare
BPHYT_RS29630 -1.7 -1.4 SAM-dependent methyltransferase compare
BPHYT_RS08410 -1.7 -0.6 dehydrogenase compare
BPHYT_RS22720 -1.7 -2.1 LysR family transcriptional regulator compare
BPHYT_RS04890 -1.7 -0.8 cobalamin biosynthesis protein CobD compare
BPHYT_RS14660 -1.7 -1.5 hypothetical protein compare
BPHYT_RS04010 -1.7 -0.6 glycosyl transferase compare
BPHYT_RS17265 -1.7 -0.8 cell division protein compare
BPHYT_RS22360 -1.7 -1.0 response regulator receiver compare
BPHYT_RS06255 -1.7 -1.6 spore coat protein U compare
BPHYT_RS27330 -1.7 -0.8 hypothetical protein compare
BPHYT_RS07540 -1.7 -0.6 hypothetical protein compare
BPHYT_RS30140 -1.7 -0.6 3-methylitaconate isomerase compare
BPHYT_RS10215 -1.7 -0.6 sulfate transporter compare
BPHYT_RS28235 -1.7 -1.2 L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) (from data) compare
BPHYT_RS04015 -1.7 -1.1 glycosyl transferase compare
BPHYT_RS30055 -1.7 -1.1 hypothetical protein compare
BPHYT_RS10165 -1.7 -0.5 transcriptional regulator compare
BPHYT_RS09960 -1.6 -2.7 short-chain dehydrogenase compare
BPHYT_RS01180 -1.6 -2.0 AraC family transcriptional regulator compare
BPHYT_RS17830 -1.6 -2.6 histidine kinase compare
BPHYT_RS35385 -1.6 -2.7 GntR family transcriptional regulator compare
BPHYT_RS20185 -1.6 -1.1 sugar transferase compare
BPHYT_RS07475 -1.6 -0.8 nitrate reductase compare
BPHYT_RS18760 -1.6 -1.1 flagellar biosynthesis protein FliT compare
BPHYT_RS13325 -1.6 -1.0 TetR family transcriptional regulator compare
BPHYT_RS31015 -1.6 -2.4 3-deoxy-manno-octulosonate cytidylyltransferase 2 compare
BPHYT_RS21130 -1.6 -1.8 F420-dependent oxidoreductase compare
BPHYT_RS31910 -1.6 -0.7 hypothetical protein compare
BPHYT_RS28025 -1.6 -0.9 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS20440 -1.6 -0.6 IclR family transcriptional regulator compare
BPHYT_RS35800 -1.6 -1.9 TetR family transcriptional regulator compare
BPHYT_RS18630 -1.6 -1.8 allophanate hydrolase compare
BPHYT_RS00690 -1.6 -0.5 transcriptional regulator compare
BPHYT_RS11970 -1.6 -0.7 cupin compare
BPHYT_RS22765 -1.6 -1.7 beta-galactosidase compare
BPHYT_RS16990 -1.6 -5.0 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BPHYT_RS27860 -1.6 -0.9 membrane protein compare
BPHYT_RS23090 -1.5 -1.0 histidine kinase compare
BPHYT_RS28830 -1.5 -0.5 LysR family transcriptional regulator compare
BPHYT_RS29655 -1.5 -1.3 polysaccharide deacetylase compare
BPHYT_RS23315 -1.5 -0.7 hypothetical protein compare
BPHYT_RS27655 -1.5 -0.7 potassium transporter compare
BPHYT_RS01280 -1.5 -0.9 hypothetical protein compare
BPHYT_RS26385 -1.5 -0.8 glutamine amidotransferase compare
BPHYT_RS25815 -1.5 -1.0 deoxyribose-phosphate aldolase compare
BPHYT_RS03835 -1.5 -4.3 D-lactate dehydrogenase compare
BPHYT_RS21445 -1.5 -1.4 sugar ABC transporter ATP-binding protein compare
BPHYT_RS03730 -1.5 -1.4 transcriptional repressor NrdR compare
BPHYT_RS33075 -1.5 -3.2 sulfatase maturase compare
BPHYT_RS28285 -1.5 -0.6 MFS transporter compare
BPHYT_RS24925 -1.5 -1.0 cytochrome O ubiquinol oxidase compare
BPHYT_RS24755 -1.5 -1.4 catalase compare
BPHYT_RS03640 -1.5 -2.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BPHYT_RS04335 -1.5 -0.6 membrane protein compare
BPHYT_RS27305 -1.5 -0.5 hypothetical protein compare
BPHYT_RS11060 -1.4 -0.7 4-hydroxybenzoate 3-monooxygenase compare
BPHYT_RS34805 -1.4 -3.3 ABC transporter compare
BPHYT_RS15530 -1.4 -1.9 glutathione ABC transporter permease compare
BPHYT_RS31700 -1.4 -2.0 porin compare
BPHYT_RS32360 -1.4 -0.7 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS34780 -1.4 -1.9 phytoene synthase compare
BPHYT_RS30265 -1.4 -0.9 hypothetical protein compare
BPHYT_RS07770 -1.4 -0.9 hypothetical protein compare
BPHYT_RS28965 -1.4 -0.9 hypothetical protein compare
BPHYT_RS03375 -1.4 -0.8 NAD(P) transhydrogenase compare
BPHYT_RS06710 -1.4 -0.6 hypothetical protein compare
BPHYT_RS33580 -1.4 -2.3 geranyltranstransferase compare
BPHYT_RS21155 -1.4 -2.8 NAD(P) transhydrogenase compare
BPHYT_RS03875 -1.4 -1.0 dehydrogenase compare
BPHYT_RS05550 -1.4 -1.7 hypothetical protein compare
BPHYT_RS23880 -1.4 -0.9 sugar ABC transporter permease compare
BPHYT_RS16195 -1.4 -1.2 carbon monoxide dehydrogenase subunit G compare
BPHYT_RS01095 -1.4 -0.7 hypothetical protein compare
BPHYT_RS24955 -1.4 -1.0 cytochrome C peroxidase compare
BPHYT_RS10095 -1.4 -0.8 integrase compare
BPHYT_RS13370 -1.4 -2.4 alpha/beta hydrolase compare
BPHYT_RS11960 -1.4 -0.4 MarR family transcriptional regulator compare
BPHYT_RS34300 -1.3 -2.3 major facilitator transporter compare
BPHYT_RS18340 -1.3 -0.6 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS13265 -1.3 -2.2 hypothetical protein compare
BPHYT_RS02570 -1.3 -5.4 phosphocarrier protein HPr compare
BPHYT_RS14185 -1.3 -0.6 transcription elongation factor GreA compare
BPHYT_RS05610 -1.3 -9.8 DNA-cytosine methyltransferase compare
BPHYT_RS24375 -1.3 -2.8 type VI secretion system protein ImpK compare
BPHYT_RS13315 -1.3 -1.0 dihydropyrimidine dehydrogenase subunit A compare
BPHYT_RS32870 -1.3 -1.5 hypothetical protein compare
BPHYT_RS29970 -1.3 -1.6 sugar ABC transporter permease compare
BPHYT_RS01975 -1.3 -0.7 hypothetical protein compare
BPHYT_RS02575 -1.3 -6.6 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS04865 -1.3 -1.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BPHYT_RS26115 -1.3 -1.4 polysaccharide deacetylase compare


Specific Phenotypes

For 3 genes in this experiment