Experiment set39S303 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO2 MOI 1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS22815 -4.1 -2.0 TonB-denpendent receptor compare
BPHYT_RS17525 -4.0 -2.0 glutaredoxin compare
BPHYT_RS07320 -4.0 -1.1 dihydrodipicolinate synthetase compare
BPHYT_RS09545 -3.8 -1.8 peptide methionine sulfoxide reductase compare
BPHYT_RS20440 -3.7 -1.1 IclR family transcriptional regulator compare
BPHYT_RS30040 -3.6 -1.0 hypothetical protein compare
BPHYT_RS27230 -3.6 -1.0 hypothetical protein compare
BPHYT_RS30490 -3.4 -1.0 2-haloalkanoic acid dehalogenase compare
BPHYT_RS13605 -3.4 -1.0 tRNA-Pro compare
BPHYT_RS18705 -3.4 -1.6 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS25980 -3.3 -0.9 urea carboxylase compare
BPHYT_RS21625 -3.2 -0.9 LysR family transcriptional regulator compare
BPHYT_RS08410 -3.2 -0.9 dehydrogenase compare
BPHYT_RS34490 -3.2 -0.9 hypothetical protein compare
BPHYT_RS27920 -3.2 -0.9 tricarballylate utilization protein B compare
BPHYT_RS10850 -3.1 -1.3 LysR family transcriptional regulator compare
BPHYT_RS13450 -3.1 -1.2 GntR family transcriptional regulator compare
BPHYT_RS08665 -3.1 -0.9 hypothetical protein compare
BPHYT_RS31415 -3.1 -1.2 amino acid ABC transporter permease compare
BPHYT_RS09905 -3.1 -0.9 hypothetical protein compare
BPHYT_RS29920 -3.1 -0.9 hypothetical protein compare
BPHYT_RS12510 -3.1 -1.5 RNA-binding protein compare
BPHYT_RS33580 -3.0 -4.0 geranyltranstransferase compare
BPHYT_RS06350 -3.0 -1.4 chemotaxis protein CheY compare
BPHYT_RS03645 -2.9 -2.1 tRNA dimethylallyltransferase compare
BPHYT_RS01485 -2.9 -1.2 histidine kinase compare
BPHYT_RS22455 -2.9 -0.8 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS26490 -2.9 -0.8 hypothetical protein compare
BPHYT_RS31260 -2.8 -1.1 histidine kinase compare
BPHYT_RS10305 -2.8 -1.1 hypothetical protein compare
BPHYT_RS25870 -2.8 -0.8 type III secretion system ATPase compare
BPHYT_RS09860 -2.7 -0.8 pilus assembly protein PilP compare
BPHYT_RS02300 -2.7 -1.1 acid shock protein compare
BPHYT_RS18590 -2.7 -0.8 hypothetical protein compare
BPHYT_RS33185 -2.7 -2.5 methyltransferase type 11 compare
BPHYT_RS21335 -2.6 -1.0 CDP-alcohol phosphatidyltransferase compare
BPHYT_RS11765 -2.6 -0.7 polyamine ABC transporter permease compare
BPHYT_RS28920 -2.6 -1.0 cellulose synthase compare
BPHYT_RS34780 -2.6 -2.3 phytoene synthase compare
BPHYT_RS09895 -2.5 -1.0 LysR family transcriptional regulator compare
BPHYT_RS22355 -2.5 -1.4 HAD family hydrolase compare
BPHYT_RS24315 -2.5 -1.2 phosphoribosyltransferase compare
BPHYT_RS13160 -2.5 -1.0 membrane protein compare
BPHYT_RS03655 -2.5 -0.9 membrane protein compare
BPHYT_RS14060 -2.4 -1.2 peptidase M23 compare
BPHYT_RS04965 -2.4 -6.2 ATP-binding protein compare
BPHYT_RS10680 -2.4 -1.7 LysR family transcriptional regulator compare
BPHYT_RS02765 -2.4 -1.2 cytochrome BD oxidase subunit I compare
BPHYT_RS33765 -2.4 -0.7 membrane protein compare
BPHYT_RS25605 -2.4 -2.8 symporter compare
BPHYT_RS08355 -2.4 -1.0 hypothetical protein compare
BPHYT_RS20235 -2.4 -4.4 iron ABC transporter compare
BPHYT_RS33175 -2.3 -1.3 hypothetical protein compare
BPHYT_RS27655 -2.3 -0.9 potassium transporter compare
BPHYT_RS00815 -2.3 -0.9 hypothetical protein compare
BPHYT_RS26160 -2.3 -2.4 membrane protein compare
BPHYT_RS23445 -2.3 -1.4 hexuronate transporter compare
BPHYT_RS35315 -2.2 -1.8 threonyl-tRNA synthetase compare
BPHYT_RS33610 -2.2 -0.8 DNA polymerase I compare
BPHYT_RS09205 -2.2 -1.6 cytochrome P450 compare
BPHYT_RS08235 -2.2 -0.6 nucleoprotein, Hfg, host factor I compare
BPHYT_RS31305 -2.2 -1.7 alcohol dehydrogenase compare
BPHYT_RS32675 -2.2 -1.4 2-methylcitrate dehydratase compare
BPHYT_RS10540 -2.1 -0.8 secretion protein compare
BPHYT_RS22910 -2.1 -0.6 hypothetical protein compare
BPHYT_RS10945 -2.1 -1.2 2-deoxy-D-gluconate 3-dehydrogenase compare
BPHYT_RS33655 -2.1 -2.4 MarR family transcriptional regulator compare
BPHYT_RS11540 -2.0 -1.9 ureidoglycolate hydrolase compare
BPHYT_RS30055 -2.0 -1.1 hypothetical protein compare
BPHYT_RS10175 -2.0 -1.4 membrane protein compare
BPHYT_RS17030 -2.0 -1.0 lipid hydroperoxide peroxidase compare
BPHYT_RS16555 -2.0 -3.4 cation transporter compare
BPHYT_RS26575 -2.0 -1.3 hypothetical protein compare
BPHYT_RS13130 -2.0 -1.0 metallophosphatase compare
BPHYT_RS29865 -2.0 -1.0 sugar transferase compare
BPHYT_RS26525 -2.0 -0.8 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS23350 -2.0 -1.8 NAD-dependent epimerase/dehydratase compare
BPHYT_RS12380 -2.0 -1.7 ABC transporter permease compare
BPHYT_RS28365 -2.0 -1.0 Germin subfamily 1 member 15 compare
BPHYT_RS19905 -1.9 -1.2 membrane protein compare
BPHYT_RS23520 -1.9 -1.1 peroxidase compare
BPHYT_RS27455 -1.9 -0.7 rod shape-determining protein MreB compare
BPHYT_RS34810 -1.9 -1.7 RND transporter compare
BPHYT_RS10185 -1.9 -1.8 MarR family transcriptional regulator compare
BPHYT_RS04365 -1.9 -9.2 membrane protein compare
BPHYT_RS18910 -1.9 -1.1 FlgN compare
BPHYT_RS11745 -1.9 -0.7 (2Fe-2S)-binding protein compare
BPHYT_RS10095 -1.8 -1.2 integrase compare
BPHYT_RS09355 -1.8 -1.1 LysR family transcriptional regulator compare
BPHYT_RS29700 -1.8 -2.8 cytochrome C1 compare
BPHYT_RS26465 -1.8 -0.7 metallophosphoesterase compare
BPHYT_RS14840 -1.8 -6.9 lytic transglycosylase compare
BPHYT_RS12615 -1.8 -0.5 dihydrodipicolinate synthase compare
BPHYT_RS09465 -1.8 -1.2 transcriptional regulator compare
BPHYT_RS26305 -1.8 -1.4 exonuclease compare
BPHYT_RS19785 -1.8 -1.4 chemotaxis protein CheY compare
BPHYT_RS14505 -1.8 -1.4 membrane protein compare
BPHYT_RS31900 -1.8 -1.6 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS18610 -1.8 -3.8 lytic transglycosylase compare
BPHYT_RS04330 -1.7 -5.0 hypothetical protein compare
BPHYT_RS02005 -1.7 -1.4 diguanylate phosphodiesterase compare
BPHYT_RS26310 -1.7 -0.9 ribonuclease R compare
BPHYT_RS27155 -1.7 -0.8 peroxiredoxin compare
BPHYT_RS14865 -1.7 -1.0 UDP-glucose 6-dehydrogenase compare
BPHYT_RS02860 -1.7 -0.5 membrane protein compare
BPHYT_RS20000 -1.7 -1.7 serine/threonine protein kinase compare
BPHYT_RS23675 -1.7 -1.0 lysine transporter LysE compare
BPHYT_RS25710 -1.7 -1.2 hypothetical protein compare
BPHYT_RS14605 -1.7 -2.4 sodium transporter compare
BPHYT_RS03570 -1.7 -2.9 heat-inducible transcription repressor HrcA compare
BPHYT_RS05775 -1.7 -2.1 hypothetical protein compare
BPHYT_RS31055 -1.7 -1.4 glycosyl transferase compare
BPHYT_RS01945 -1.6 -1.8 hypothetical protein compare
BPHYT_RS26375 -1.6 -1.2 ATPase AAA compare
BPHYT_RS35585 -1.6 -1.9 hypothetical protein compare
BPHYT_RS33515 -1.6 -6.0 porin compare
BPHYT_RS14670 -1.6 -0.8 hypothetical protein compare
BPHYT_RS13735 -1.6 -2.4 membrane protein compare
BPHYT_RS17240 -1.6 -0.4 cell division protein FtsW compare
BPHYT_RS01340 -1.6 -1.4 ChrB domain-containing protein compare
BPHYT_RS18865 -1.6 -1.7 flagellar L-ring protein FlgH compare
BPHYT_RS15015 -1.6 -0.6 ArsR family transcriptional regulator compare
BPHYT_RS31905 -1.6 -1.2 hypothetical protein compare
BPHYT_RS30335 -1.6 -1.6 hypothetical protein compare
BPHYT_RS00160 -1.6 -2.4 ABC transporter substrate-binding protein compare
BPHYT_RS05650 -1.6 -1.1 hypothetical protein compare
BPHYT_RS05285 -1.6 -0.8 hypothetical protein compare
BPHYT_RS07325 -1.6 -0.4 GntR family transcriptional regulator compare
BPHYT_RS36485 -1.6 -3.2 hypothetical protein compare
BPHYT_RS02570 -1.6 -6.0 phosphocarrier protein HPr compare
BPHYT_RS31950 -1.6 -1.5 short-chain dehydrogenase compare
BPHYT_RS12990 -1.5 -1.6 iron transporter compare
BPHYT_RS14550 -1.5 -0.6 tRNA-Asn compare
BPHYT_RS07595 -1.5 -1.0 membrane protein compare
BPHYT_RS03065 -1.5 -1.0 LuxR family transcriptional regulator compare
BPHYT_RS32210 -1.5 -0.9 hypothetical protein compare
BPHYT_RS06410 -1.5 -1.3 transcriptional regulator compare
BPHYT_RS17095 -1.5 -2.4 proline--tRNA ligase compare
BPHYT_RS08150 -1.5 -0.6 membrane protein compare
BPHYT_RS06105 -1.5 -0.8 hypothetical protein compare
BPHYT_RS02415 -1.5 -2.9 cytochrome C550 compare
BPHYT_RS30140 -1.5 -0.6 3-methylitaconate isomerase compare
BPHYT_RS10645 -1.5 -0.6 cyanate hydratase compare
BPHYT_RS34305 -1.5 -1.3 succinate-semialdehyde dehydrogenase compare
BPHYT_RS13320 -1.5 -0.7 allantoate amidohydrolase compare
BPHYT_RS33060 -1.5 -1.4 hypothetical protein compare
BPHYT_RS22360 -1.5 -1.0 response regulator receiver compare
BPHYT_RS35885 -1.5 -1.8 hypothetical protein compare
BPHYT_RS07400 -1.5 -1.2 hypothetical protein compare
BPHYT_RS31830 -1.5 -1.6 hypothetical protein compare
BPHYT_RS12060 -1.5 -0.9 hypothetical protein compare
BPHYT_RS13490 -1.5 -2.4 hypothetical protein compare
BPHYT_RS13610 -1.5 -1.0 MerR family transcriptional regulator compare
BPHYT_RS10135 -1.5 -0.6 hypothetical protein compare
BPHYT_RS29745 -1.5 -1.4 phosphonopyruvate decarboxylase compare
BPHYT_RS20025 -1.4 -1.7 crotonase compare
BPHYT_RS01975 -1.4 -0.9 hypothetical protein compare
BPHYT_RS20095 -1.4 -0.7 transcriptional regulator compare
BPHYT_RS19335 -1.4 -1.0 hypothetical protein compare
BPHYT_RS36275 -1.4 -0.7 hypothetical protein compare
BPHYT_RS36385 -1.4 -0.5 TetR family transcriptional regulator compare
BPHYT_RS22885 -1.4 -1.5 hypothetical protein compare
BPHYT_RS23600 -1.4 -1.0 hypothetical protein compare
BPHYT_RS23525 -1.4 -0.7 hypothetical protein compare
BPHYT_RS26470 -1.4 -0.5 MFS transporter compare
BPHYT_RS05550 -1.4 -3.1 hypothetical protein compare
BPHYT_RS35090 -1.4 -2.6 diaminopimelate decarboxylase compare
BPHYT_RS02155 -1.4 -2.7 dithiobiotin synthetase compare
BPHYT_RS24945 -1.4 -2.3 alkylhydroperoxidase compare
BPHYT_RS03995 -1.4 -2.9 protein tyrosine kinase compare
BPHYT_RS09585 -1.3 -0.9 hypothetical protein compare
BPHYT_RS09105 -1.3 -3.3 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS06375 -1.3 -1.5 ribonuclease compare
BPHYT_RS20225 -1.3 -4.5 taurine catabolism dioxygenase tauD/tfdA compare
BPHYT_RS03110 -1.3 -1.6 MarR family transcriptional regulator compare
BPHYT_RS30720 -1.3 -1.1 hypothetical protein compare
BPHYT_RS28600 -1.3 -0.8 ArsC family transcriptional regulator compare
BPHYT_RS28840 -1.3 -2.0 oxidoreductase compare
BPHYT_RS20245 -1.3 -1.7 iron ABC transporter substrate-binding protein compare
BPHYT_RS09795 -1.3 -2.5 UTP--glucose-1-phosphate uridylyltransferase compare
BPHYT_RS12820 -1.3 -3.1 D-alanyl-D-alanine carboxypeptidase compare
BPHYT_RS27305 -1.3 -0.5 hypothetical protein compare
BPHYT_RS24670 -1.3 -1.3 ABC transporter permease compare
BPHYT_RS23430 -1.3 -0.9 bifunctional D-altronate/D-mannonate dehydratase compare
BPHYT_RS07090 -1.3 -1.0 hypothetical protein compare
BPHYT_RS26080 -1.3 -0.5 ABC transporter ATPase compare
BPHYT_RS29230 -1.3 -1.1 hypothetical protein compare
BPHYT_RS36130 -1.3 -0.8 hypothetical protein compare
BPHYT_RS14210 -1.3 -1.9 hydroxyacylglutathione hydrolase compare
BPHYT_RS21350 -1.3 -1.1 ADP-glucose pyrophosphorylase compare
BPHYT_RS04325 -1.3 -3.3 acyltransferase 3 compare
BPHYT_RS28150 -1.3 -2.0 methylmalonate-semialdehyde dehydrogenase compare
BPHYT_RS33135 -1.2 -1.4 LysR family transcriptional regulator compare
BPHYT_RS05920 -1.2 -2.1 rod shape-determining protein RodA compare
BPHYT_RS04335 -1.2 -0.6 membrane protein compare
BPHYT_RS34010 -1.2 -2.4 pilus assembly protein compare
BPHYT_RS13245 -1.2 -2.4 hypothetical protein compare
BPHYT_RS10760 -1.2 -2.1 major facilitator transporter compare
BPHYT_RS28015 -1.2 -2.5 enoyl-CoA hydratase compare
BPHYT_RS31600 -1.2 -1.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments