Experiment set39S298 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO MOI 0.1

200 most important genes:

  gene name fitness t score description  
BPHYT_RS28365 -4.3 -1.4 Germin subfamily 1 member 15 compare
BPHYT_RS30040 -3.6 -1.2 hypothetical protein compare
BPHYT_RS25885 -3.5 -1.6 type III secretion protein compare
BPHYT_RS03375 -3.1 -1.4 NAD(P) transhydrogenase compare
BPHYT_RS11825 -3.0 -1.0 cytosine deaminase compare
BPHYT_RS01975 -3.0 -1.4 hypothetical protein compare
BPHYT_RS00690 -2.9 -0.9 transcriptional regulator compare
BPHYT_RS10185 -2.9 -1.8 MarR family transcriptional regulator compare
BPHYT_RS26080 -2.9 -0.9 ABC transporter ATPase compare
BPHYT_RS06350 -2.8 -1.6 chemotaxis protein CheY compare
BPHYT_RS34085 -2.8 -1.8 polyamine ABC transporter permease compare
BPHYT_RS36365 -2.8 -1.3 hypothetical protein compare
BPHYT_RS11960 -2.7 -0.9 MarR family transcriptional regulator compare
BPHYT_RS05650 -2.6 -1.4 hypothetical protein compare
BPHYT_RS35675 -2.5 -2.1 short-chain dehydrogenase compare
BPHYT_RS17405 -2.5 -1.1 indole-3-glycerol phosphate synthase compare
BPHYT_RS36525 -2.5 -1.4 hypothetical protein compare
BPHYT_RS07400 -2.4 -1.7 hypothetical protein compare
BPHYT_RS05895 -2.4 -1.1 hypothetical protein compare
BPHYT_RS18610 -2.2 -4.2 lytic transglycosylase compare
BPHYT_RS35750 -2.2 -1.4 hypothetical protein compare
BPHYT_RS29015 -2.2 -1.4 RND transporter compare
BPHYT_RS03280 -2.1 -0.9 mannose-1-phosphate guanylyltransferase compare
BPHYT_RS28885 -2.1 -1.2 betaine-aldehyde dehydrogenase compare
BPHYT_RS33655 -2.0 -2.4 MarR family transcriptional regulator compare
BPHYT_RS16555 -2.0 -3.6 cation transporter compare
BPHYT_RS24540 -2.0 -2.2 DMSO reductase compare
BPHYT_RS19985 -2.0 -0.9 CoA-transferase compare
BPHYT_RS16180 -2.0 -0.6 TetR family transcriptional regulator compare
BPHYT_RS02135 -1.9 -1.9 glyoxylate reductase compare
BPHYT_RS22360 -1.9 -1.0 response regulator receiver compare
BPHYT_RS22810 -1.9 -0.9 biopolymer transporter ExbB compare
BPHYT_RS20590 -1.9 -1.9 methionine sulfoxide reductase A compare
BPHYT_RS11745 -1.9 -0.8 (2Fe-2S)-binding protein compare
BPHYT_RS24655 -1.8 -1.3 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS23940 -1.8 -0.8 GntR family transcriptional regulator compare
BPHYT_RS11020 -1.8 -1.6 transporter compare
BPHYT_RS10125 -1.8 -1.1 hypothetical protein compare
BPHYT_RS06320 -1.8 -0.8 chemotaxis protein CheY compare
BPHYT_RS13390 -1.8 -0.8 IclR family transcriptional regulator compare
BPHYT_RS26280 -1.8 -1.9 hypothetical protein compare
BPHYT_RS13605 -1.8 -0.8 tRNA-Pro compare
BPHYT_RS20235 -1.7 -4.2 iron ABC transporter compare
BPHYT_RS13835 -1.7 -1.2 S-adenosylhomocysteine nucleosidase compare
BPHYT_RS33135 -1.7 -1.4 LysR family transcriptional regulator compare
BPHYT_RS34810 -1.7 -1.6 RND transporter compare
BPHYT_RS02860 -1.7 -0.5 membrane protein compare
BPHYT_RS23445 -1.7 -1.6 hexuronate transporter compare
BPHYT_RS28680 -1.7 -1.8 porin compare
BPHYT_RS25780 -1.6 -0.5 DeoR faimly transcriptional regulator compare
BPHYT_RS10120 -1.6 -1.8 membrane protein compare
BPHYT_RS03090 -1.6 -1.3 hypothetical protein compare
BPHYT_RS33125 -1.6 -1.5 hypothetical protein compare
BPHYT_RS27920 -1.6 -0.7 tricarballylate utilization protein B compare
BPHYT_RS35480 -1.6 -1.8 salicylyl-CoA 5-hydroxylase compare
BPHYT_RS26815 -1.6 -2.0 1-aminocyclopropane-1-carboxylate deaminase compare
BPHYT_RS13325 -1.6 -0.9 TetR family transcriptional regulator compare
BPHYT_RS16250 -1.6 -0.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS07320 -1.6 -0.9 dihydrodipicolinate synthetase compare
BPHYT_RS21625 -1.6 -0.7 LysR family transcriptional regulator compare
BPHYT_RS17520 -1.6 -3.3 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS22930 -1.6 -0.7 type II secretion system protein compare
BPHYT_RS30720 -1.6 -1.2 hypothetical protein compare
BPHYT_RS19945 -1.6 -2.0 hypothetical protein compare
BPHYT_RS34625 -1.5 -2.3 hypothetical protein compare
BPHYT_RS07760 -1.5 -1.5 diguanylate phosphodiesterase compare
BPHYT_RS10165 -1.5 -0.7 transcriptional regulator compare
BPHYT_RS23875 -1.5 -0.8 sugar ABC transporter ATP-binding protein compare
BPHYT_RS10475 -1.5 -1.2 mammalian cell entry protein compare
BPHYT_RS08995 -1.5 -0.7 hypothetical protein compare
BPHYT_RS29750 -1.5 -1.4 phosphoenolpyruvate phosphomutase compare
BPHYT_RS07325 -1.5 -0.5 GntR family transcriptional regulator compare
BPHYT_RS26400 -1.5 -2.3 sodium:solute symporter compare
BPHYT_RS27060 -1.5 -1.0 photosystem reaction center subunit H compare
BPHYT_RS14060 -1.5 -1.1 peptidase M23 compare
BPHYT_RS20000 -1.5 -1.7 serine/threonine protein kinase compare
BPHYT_RS15890 -1.5 -0.8 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
BPHYT_RS30140 -1.5 -0.6 3-methylitaconate isomerase compare
BPHYT_RS25480 -1.4 -2.2 hypothetical protein compare
BPHYT_RS08415 -1.4 -1.2 hypothetical protein compare
BPHYT_RS26820 -1.4 -1.1 LysR family transcriptional regulator compare
BPHYT_RS32360 -1.4 -0.9 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS34780 -1.4 -2.3 phytoene synthase compare
BPHYT_RS28705 -1.4 -1.0 IclR family transcriptional regulator compare
BPHYT_RS06990 -1.4 -0.6 membrane protein compare
BPHYT_RS06900 -1.4 -3.4 aspartate aminotransferase compare
BPHYT_RS28715 -1.4 -1.9 cupin compare
BPHYT_RS03685 -1.4 -2.1 Tol system periplasmic component YbgF compare
BPHYT_RS27715 -1.3 -1.1 UspA domain-containing protein compare
BPHYT_RS05620 -1.3 -0.8 CsbD family protein compare
BPHYT_RS20440 -1.3 -0.7 IclR family transcriptional regulator compare
BPHYT_RS02765 -1.3 -0.9 cytochrome BD oxidase subunit I compare
BPHYT_RS11995 -1.3 -2.1 flagellar hook protein FlgE compare
BPHYT_RS23525 -1.3 -0.7 hypothetical protein compare
BPHYT_RS28245 -1.3 -1.1 MFS transporter compare
BPHYT_RS23310 -1.3 -2.6 hypothetical protein compare
BPHYT_RS02005 -1.3 -1.4 diguanylate phosphodiesterase compare
BPHYT_RS23225 -1.3 -1.1 hypothetical protein compare
BPHYT_RS08360 -1.3 -1.1 LysR family transcriptional regulator compare
BPHYT_RS33130 -1.3 -1.9 transcriptional regulator compare
BPHYT_RS36385 -1.3 -0.6 TetR family transcriptional regulator compare
BPHYT_RS22940 -1.3 -1.0 pilus assembly protein TadE compare
BPHYT_RS25220 -1.3 -1.8 ferredoxin oxidoreductase compare
BPHYT_RS26115 -1.3 -1.6 polysaccharide deacetylase compare
BPHYT_RS20245 -1.3 -3.2 iron ABC transporter substrate-binding protein compare
BPHYT_RS27230 -1.3 -0.7 hypothetical protein compare
BPHYT_RS13160 -1.3 -0.8 membrane protein compare
BPHYT_RS26965 -1.3 -1.0 L-lactate dehydrogenase, LldG subunit (from data) compare
BPHYT_RS08335 -1.2 -0.7 hypothetical protein compare
BPHYT_RS24945 -1.2 -2.3 alkylhydroperoxidase compare
BPHYT_RS32395 -1.2 -0.6 hypothetical protein compare
BPHYT_RS14895 -1.2 -0.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS28110 -1.2 -1.0 hypothetical protein compare
BPHYT_RS28675 -1.2 -2.5 hypothetical protein compare
BPHYT_RS34565 -1.2 -1.5 chemotaxis protein compare
BPHYT_RS09565 -1.2 -0.9 acetyl-CoA acetyltransferase compare
BPHYT_RS02130 -1.2 -1.2 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS30335 -1.2 -2.1 hypothetical protein compare
BPHYT_RS09205 -1.2 -1.3 cytochrome P450 compare
BPHYT_RS23315 -1.2 -0.8 hypothetical protein compare
BPHYT_RS14665 -1.2 -1.4 hypothetical protein compare
BPHYT_RS23600 -1.2 -1.0 hypothetical protein compare
BPHYT_RS27960 -1.2 -2.3 ABC transporter ATP-binding protein compare
BPHYT_RS09970 -1.2 -1.7 glutathione S-transferase compare
BPHYT_RS22455 -1.2 -0.5 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS35535 -1.2 -2.3 arsenic transporter compare
BPHYT_RS26135 -1.2 -0.7 ABC transporter permease compare
BPHYT_RS20900 -1.2 -1.3 phytanoyl-CoA dioxygenase compare
BPHYT_RS35835 -1.2 -1.4 hypothetical protein compare
BPHYT_RS04865 -1.2 -1.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BPHYT_RS33745 -1.2 -2.8 metallophosphoesterase compare
BPHYT_RS12535 -1.1 -0.5 membrane protein compare
BPHYT_RS29035 -1.1 -1.3 arsenic transporter compare
BPHYT_RS25870 -1.1 -0.5 type III secretion system ATPase compare
BPHYT_RS22355 -1.1 -1.1 HAD family hydrolase compare
BPHYT_RS03655 -1.1 -0.9 membrane protein compare
BPHYT_RS06025 -1.1 -2.0 hypothetical protein compare
BPHYT_RS07475 -1.1 -0.8 nitrate reductase compare
BPHYT_RS10115 -1.1 -1.2 hypothetical protein compare
BPHYT_RS29100 -1.1 -0.7 ketosteroid isomerase compare
BPHYT_RS28955 -1.1 -0.9 hypothetical protein compare
BPHYT_RS29865 -1.1 -0.8 sugar transferase compare
BPHYT_RS04335 -1.1 -0.6 membrane protein compare
BPHYT_RS28360 -1.1 -0.8 carboxymuconolactone decarboxylase compare
BPHYT_RS30375 -1.1 -2.9 hypothetical protein compare
BPHYT_RS02365 -1.1 -0.9 hypothetical protein compare
BPHYT_RS04595 -1.1 -0.9 cytoplasmic protein compare
BPHYT_RS02285 -1.1 -3.1 cell division protein compare
BPHYT_RS20165 -1.1 -1.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BPHYT_RS05365 -1.1 -1.1 3-ketoacyl-ACP reductase compare
BPHYT_RS20325 -1.1 -1.9 acyl-CoA dehydrogenase compare
BPHYT_RS00740 -1.1 -1.3 hypothetical protein compare
BPHYT_RS10680 -1.1 -1.2 LysR family transcriptional regulator compare
BPHYT_RS25820 -1.1 -1.1 sugar ABC transporter compare
BPHYT_RS24590 -1.1 -0.6 DeoR faimly transcriptional regulator compare
BPHYT_RS27495 -1.1 -0.5 hypothetical protein compare
BPHYT_RS09000 -1.1 -0.6 competence protein ComE compare
BPHYT_RS12925 -1.1 -0.5 exodeoxyribonuclease III compare
BPHYT_RS30055 -1.1 -0.7 hypothetical protein compare
BPHYT_RS09655 -1.1 -3.1 mechanosensitive ion channel protein MscS compare
BPHYT_RS30010 -1.1 -0.7 cell division protein compare
BPHYT_RS32210 -1.1 -0.7 hypothetical protein compare
BPHYT_RS14465 -1.0 -2.2 peptidase S49 compare
BPHYT_RS11840 -1.0 -1.4 LysR family transcriptional regulator compare
BPHYT_RS13265 -1.0 -2.4 hypothetical protein compare
BPHYT_RS02575 -1.0 -7.0 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS27970 -1.0 -1.5 sugar ABC transporter permease compare
BPHYT_RS23075 -1.0 -1.5 GntR family transcriptional regulator compare
BPHYT_RS05395 -1.0 -1.0 hypothetical protein compare
BPHYT_RS06440 -1.0 -2.4 ATPase compare
BPHYT_RS27865 -1.0 -1.5 ATPase compare
BPHYT_RS01455 -1.0 -0.6 peptide deformylase compare
BPHYT_RS18590 -1.0 -0.4 hypothetical protein compare
BPHYT_RS27030 -1.0 -0.5 transcriptional regulator compare
BPHYT_RS11970 -1.0 -0.7 cupin compare
BPHYT_RS10635 -1.0 -1.1 transcriptional regulator compare
BPHYT_RS06255 -1.0 -2.0 spore coat protein U compare
BPHYT_RS16025 -1.0 -2.1 Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data) compare
BPHYT_RS11310 -1.0 -0.8 LysR family transcriptional regulator compare
BPHYT_RS23275 -1.0 -1.1 3-methylcrotonyl-CoA carboxylase subunit alpha compare
BPHYT_RS10340 -1.0 -1.8 sensor protein Chase2 compare
BPHYT_RS13470 -1.0 -0.4 arylsulfate sulfotransferase compare
BPHYT_RS09585 -1.0 -0.9 hypothetical protein compare
BPHYT_RS21150 -1.0 -2.2 NAD(P) transhydrogenase subunit alpha compare
BPHYT_RS35340 -1.0 -2.0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BPHYT_RS35635 -1.0 -1.5 nucleoside 2-deoxyribosyltransferase compare
BPHYT_RS02415 -1.0 -2.3 cytochrome C550 compare
BPHYT_RS01425 -1.0 -1.7 3-phosphoglycerate dehydrogenase compare
BPHYT_RS13450 -1.0 -0.8 GntR family transcriptional regulator compare
BPHYT_RS17765 -1.0 -4.2 toluene ABC transporter ATP-binding protein compare
BPHYT_RS24755 -1.0 -1.6 catalase compare
BPHYT_RS10095 -1.0 -0.8 integrase compare
BPHYT_RS05810 -1.0 -1.5 hypothetical protein compare
BPHYT_RS11110 -1.0 -2.2 chemotaxis protein CheY compare
BPHYT_RS09870 -1.0 -1.5 membrane protein compare
BPHYT_RS23170 -1.0 -1.1 XRE family transcriptional regulator compare
BPHYT_RS28480 -1.0 -1.1 hydroxyglutarate oxidase compare
BPHYT_RS16160 -1.0 -2.4 purine permease compare
BPHYT_RS15075 -1.0 -0.5 dihydrokaempferol 4-reductase compare
BPHYT_RS24105 -1.0 -1.3 chloroperoxidase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments