Experiment set39S298 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO MOI 0.1

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS19570 +3.1 26.7 sodium/hydrogen exchanger compare
BPHYT_RS19565 +3.0 21.2 gamma-glutamyl:cysteine ligase compare
BPHYT_RS11705 +2.9 3.0 hypothetical protein compare
BPHYT_RS33820 +2.5 23.4 histidine kinase compare
BPHYT_RS04945 +2.2 20.0 membrane protein compare
BPHYT_RS14140 +2.2 4.4 phosphate transporter permease subunit PstC compare
BPHYT_RS06530 +2.2 4.2 membrane protein compare
BPHYT_RS02905 +2.2 19.3 RNA polymerase subunit sigma-54 compare
BPHYT_RS30750 +2.2 2.5 GntR family transcriptional regulator compare
BPHYT_RS04950 +2.1 17.0 hypothetical protein compare
BPHYT_RS25935 +2.0 1.9 type III secretion protein compare
BPHYT_RS09330 +2.0 17.1 phytoene synthase compare
BPHYT_RS05575 +1.9 16.1 Fis family transcriptional regulator compare
BPHYT_RS23910 +1.9 4.3 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS27370 +1.8 3.4 CoA transferase compare
BPHYT_RS05155 +1.8 10.4 acetyltransferase GCN5 compare
BPHYT_RS05590 +1.8 16.2 trehalose-6-phosphate synthase compare
BPHYT_RS05560 +1.8 9.9 Fis family transcriptional regulator compare
BPHYT_RS13645 +1.8 16.8 threonine--tRNA ligase compare
BPHYT_RS28350 +1.8 2.1 fatty acid desaturase compare
BPHYT_RS06075 +1.8 10.5 hypothetical protein compare
BPHYT_RS04965 +1.8 9.8 ATP-binding protein compare
BPHYT_RS14855 +1.8 0.8 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS04385 +1.8 2.6 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS33920 +1.7 13.4 type II citrate synthase compare
BPHYT_RS12845 +1.7 13.9 ATPase compare
BPHYT_RS02595 +1.7 2.6 sulfurtransferase compare
BPHYT_RS17095 +1.7 7.8 proline--tRNA ligase compare
BPHYT_RS30995 +1.6 0.8 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS18600 +1.6 3.0 glutathione S-transferase compare
BPHYT_RS06390 +1.5 2.4 ribosome-associated protein IOJAP compare
BPHYT_RS23455 +1.5 1.7 phosphorylase compare
BPHYT_RS12725 +1.5 12.4 regulator compare
BPHYT_RS20665 +1.5 1.0 LysR family transcriptional regulator compare
BPHYT_RS18655 +1.5 8.6 3-oxoacyl-ACP synthase compare
BPHYT_RS06985 +1.5 8.1 fumarate hydratase compare
BPHYT_RS04285 +1.5 0.8 rhamnosyltransferase compare
BPHYT_RS04940 +1.5 2.5 hypothetical protein compare
BPHYT_RS09660 +1.4 9.4 trehalose-6-phosphate synthase compare
BPHYT_RS09500 +1.4 5.5 glucose-6-phosphate isomerase compare
BPHYT_RS16840 +1.4 2.9 transketolase compare
BPHYT_RS33175 +1.4 2.2 hypothetical protein compare
BPHYT_RS02540 +1.4 3.4 hypothetical protein compare
BPHYT_RS06375 +1.4 3.5 ribonuclease compare
BPHYT_RS25770 +1.3 1.1 hypothetical protein compare
BPHYT_RS14485 +1.3 5.1 ribonuclease E compare
BPHYT_RS02865 +1.3 1.1 hypothetical protein compare
BPHYT_RS02640 +1.3 9.2 cytochrome C oxidase compare
BPHYT_RS12150 +1.3 9.5 PII uridylyl-transferase compare
BPHYT_RS08945 +1.3 10.2 hypothetical protein compare
BPHYT_RS16335 +1.3 3.6 membrane protein compare
BPHYT_RS11170 +1.2 0.9 hypothetical protein compare
BPHYT_RS06065 +1.2 6.3 cytochrome C compare
BPHYT_RS28620 +1.2 2.1 enoyl-CoA hydratase compare
BPHYT_RS14395 +1.2 7.1 sugar dehydratase compare
BPHYT_RS05610 +1.2 7.4 DNA-cytosine methyltransferase compare
BPHYT_RS08850 +1.2 0.6 transcriptional regulator compare
BPHYT_RS01960 +1.2 4.8 cytochrome C compare
BPHYT_RS12990 +1.2 1.9 iron transporter compare
BPHYT_RS11155 +1.2 1.3 hypothetical protein compare
BPHYT_RS09645 +1.2 2.8 ankyrin compare
BPHYT_RS28065 +1.2 1.4 hypothetical protein compare
BPHYT_RS16390 +1.2 4.0 MarR family transcriptional regulator compare
BPHYT_RS17945 +1.2 3.1 cytochrome C biogenesis protein compare
BPHYT_RS10830 +1.1 2.4 carbon monoxide dehydrogenase compare
BPHYT_RS10400 +1.1 1.1 taurine ABC transporter permease compare
BPHYT_RS29720 +1.1 1.3 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS13935 +1.1 1.0 mannosyltransferase compare
BPHYT_RS24135 +1.1 3.0 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS14145 +1.1 6.0 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS30990 +1.1 1.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BPHYT_RS26025 +1.1 0.7 hypothetical protein compare
BPHYT_RS14735 +1.1 1.1 hypothetical protein compare
BPHYT_RS22860 +1.1 1.3 chemotaxis protein CheY compare
BPHYT_RS17035 +1.1 1.1 sugar kinase compare
BPHYT_RS24095 +1.1 3.0 membrane protein compare
BPHYT_RS07840 +1.1 1.8 muconate cycloisomerase compare
BPHYT_RS26685 +1.1 0.8 precorrin-8X methylmutase compare
BPHYT_RS30860 +1.1 1.4 sugar ABC transporter permease compare
BPHYT_RS28985 +1.1 2.3 hypothetical protein compare
BPHYT_RS12465 +1.1 1.7 inositol monophosphatase compare
BPHYT_RS28100 +1.1 2.7 hypothetical protein compare
BPHYT_RS02635 +1.1 5.7 membrane protein compare
BPHYT_RS31110 +1.1 1.8 hypothetical protein compare
BPHYT_RS03620 +1.1 5.6 poly(A) polymerase compare
BPHYT_RS34995 +1.1 2.9 MFS transporter compare
BPHYT_RS23880 +1.1 1.5 sugar ABC transporter permease compare
BPHYT_RS18910 +1.0 1.2 FlgN compare
BPHYT_RS16430 +1.0 9.1 cytochrome C compare
BPHYT_RS04290 +1.0 0.6 glycosyl transferase family 2 compare
BPHYT_RS24270 +1.0 1.5 C4-dicarboxylate ABC transporter substrate-binding protein compare
BPHYT_RS17545 +1.0 4.4 cold-shock protein compare
BPHYT_RS02650 +1.0 2.7 membrane protein compare
BPHYT_RS33580 +1.0 3.6 geranyltranstransferase compare
BPHYT_RS11815 +1.0 1.4 alcohol dehydrogenase compare
BPHYT_RS33610 +1.0 1.3 DNA polymerase I compare
BPHYT_RS04010 +1.0 0.8 glycosyl transferase compare
BPHYT_RS28670 +1.0 1.7 MFS transporter compare
BPHYT_RS34185 +1.0 2.9 cold-shock protein compare
BPHYT_RS25095 +1.0 1.3 AraC family transcriptional regulator compare
BPHYT_RS00340 +1.0 3.5 hypothetical protein compare
BPHYT_RS32225 +1.0 1.8 hypothetical protein compare
BPHYT_RS14400 +1.0 2.2 anti-sigma factor compare
BPHYT_RS17725 +1.0 7.6 BolA family transcriptional regulator compare
BPHYT_RS14340 +1.0 5.7 Fis family transcriptional regulator compare
BPHYT_RS09640 +1.0 4.3 DNAase compare
BPHYT_RS07255 +1.0 2.4 4-oxalocrotonate decarboxylase compare
BPHYT_RS21725 +1.0 1.7 taurine ABC transporter substrate-binding protein compare
BPHYT_RS05615 +1.0 1.0 hypothetical protein compare
BPHYT_RS31755 +1.0 4.3 amino acid ABC transporter ATPase compare
BPHYT_RS19940 +1.0 2.2 hypothetical protein compare
BPHYT_RS25335 +1.0 0.6 hypothetical protein compare
BPHYT_RS33695 +1.0 1.0 molybdenum ABC transporter ATPase compare
BPHYT_RS02685 +1.0 5.8 cytochrome C oxidase subunit I compare
BPHYT_RS13765 +1.0 2.6 LysR family transcriptional regulator compare
BPHYT_RS06070 +1.0 6.5 cytochrome C compare
BPHYT_RS02725 +1.0 2.2 GntR family transcriptional regulator compare
BPHYT_RS16880 +1.0 1.0 malic enzyme compare
BPHYT_RS02665 +1.0 6.5 MFS transporter compare
BPHYT_RS05705 +1.0 1.0 hypothetical protein compare
BPHYT_RS26770 +0.9 1.6 histidine kinase compare
BPHYT_RS10470 +0.9 2.3 hypothetical protein compare
BPHYT_RS34025 +0.9 1.2 hypothetical protein compare
BPHYT_RS32735 +0.9 3.1 hypothetical protein compare
BPHYT_RS21385 +0.9 1.3 short-chain dehydrogenase compare
BPHYT_RS20290 +0.9 2.3 LysR family transcriptional regulator compare
BPHYT_RS26780 +0.9 5.5 chemotaxis protein CheR compare
BPHYT_RS29520 +0.9 0.7 hypothetical protein compare
BPHYT_RS26910 +0.9 1.6 hypothetical protein compare
BPHYT_RS16435 +0.9 7.4 alcohol dehydrogenase compare
BPHYT_RS23435 +0.9 2.8 MFS transporter compare
BPHYT_RS31440 +0.9 1.8 hypothetical protein compare
BPHYT_RS19920 +0.9 1.2 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS13200 +0.9 1.7 molybdopterin binding oxidoreductase compare
BPHYT_RS16175 +0.9 0.5 hemolysin D compare
BPHYT_RS14740 +0.9 4.2 threonine-phosphate decarboxylase compare
BPHYT_RS15335 +0.9 5.1 coproporphyrinogen III oxidase compare
BPHYT_RS09355 +0.9 1.2 LysR family transcriptional regulator compare
BPHYT_RS13610 +0.9 1.5 MerR family transcriptional regulator compare
BPHYT_RS32150 +0.9 0.9 hypothetical protein compare
BPHYT_RS02530 +0.9 5.3 hypothetical protein compare
BPHYT_RS34485 +0.9 2.5 diguanylate phosphodiesterase compare
BPHYT_RS09160 +0.9 3.6 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS29110 +0.9 2.2 DNA-directed DNA polymerase compare
BPHYT_RS14135 +0.9 3.8 phosphate transporter permease subunit PtsA compare
BPHYT_RS32960 +0.9 2.2 short-chain dehydrogenase compare
BPHYT_RS11635 +0.9 0.5 RNA polymerase subunit sigma-24 compare
BPHYT_RS08170 +0.9 1.9 pilus assembly protein CpaB compare
BPHYT_RS24770 +0.9 2.1 DeoR family transcriptional regulator compare
BPHYT_RS08545 +0.9 1.2 oxidoreductase compare
BPHYT_RS33460 +0.9 0.8 protocatechuate 3,4-dioxygenase subunit alpha compare
BPHYT_RS13080 +0.9 1.0 hypothetical protein compare
BPHYT_RS35215 +0.8 1.2 dehydrogenase compare
BPHYT_RS03015 +0.8 1.0 aldolase compare
BPHYT_RS02525 +0.8 5.1 membrane protein compare
BPHYT_RS28930 +0.8 1.0 chromosome partitioning protein ParA compare
BPHYT_RS31615 +0.8 1.0 thiamine pyrophosphate protein compare
BPHYT_RS17100 +0.8 3.2 RNA pyrophosphohydrolase compare
BPHYT_RS29410 +0.8 3.3 HPr kinase compare
BPHYT_RS26930 +0.8 4.6 mechanosensitive ion channel protein compare
BPHYT_RS02435 +0.8 0.9 hypothetical protein compare
BPHYT_RS20715 +0.8 1.2 peptidase compare
BPHYT_RS17885 +0.8 2.5 3-dehydroquinate synthase compare
BPHYT_RS10205 +0.8 1.7 D-lactate dehydrogenase compare
BPHYT_RS06455 +0.8 2.0 potassium-transporting ATPase C chain compare
BPHYT_RS33810 +0.8 2.4 membrane protein compare
BPHYT_RS07380 +0.8 1.8 membrane protein compare
BPHYT_RS05585 +0.8 3.1 hypothetical protein compare
BPHYT_RS01170 +0.8 0.7 hypothetical protein compare
BPHYT_RS16290 +0.8 1.2 hypothetical protein compare
BPHYT_RS00295 +0.8 1.9 hypothetical protein compare
BPHYT_RS16345 +0.8 1.8 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS02505 +0.8 1.6 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS21765 +0.8 1.7 IclR family transcriptional regulator compare
BPHYT_RS21505 +0.8 1.8 amidohydrolase compare
BPHYT_RS34320 +0.8 1.6 DNA-binding protein compare
BPHYT_RS01435 +0.8 7.2 LysR family transcriptional regulator compare
BPHYT_RS14845 +0.8 0.5 cysteine synthase compare
BPHYT_RS15305 +0.8 3.4 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
BPHYT_RS30635 +0.8 1.1 D-aminopeptidase compare
BPHYT_RS06175 +0.8 2.0 LPS biosynthesis compare
BPHYT_RS06150 +0.8 2.3 aldehyde dehydrogenase compare
BPHYT_RS32145 +0.8 3.5 type IV secretory pathway protein VirD4 compare
BPHYT_RS09145 +0.8 5.5 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS07290 +0.8 2.1 hypothetical protein compare
BPHYT_RS17240 +0.8 0.4 cell division protein FtsW compare
BPHYT_RS07230 +0.8 1.8 LysR family transcriptional regulator compare
BPHYT_RS02760 +0.8 0.8 cytochrome BD oxidase subunit II compare
BPHYT_RS02230 +0.8 4.1 acetyl-CoA acetyltransferase compare
BPHYT_RS03455 +0.8 0.8 paraquat-inducible protein A compare
BPHYT_RS08760 +0.8 2.3 nodulation protein NodJ compare
BPHYT_RS27355 +0.8 2.7 2-dehydropantoate 2-reductase compare
BPHYT_RS03625 +0.8 3.4 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS23955 +0.8 2.1 LysR family transcriptional regulator compare
BPHYT_RS05570 +0.8 2.5 hypothetical protein compare
BPHYT_RS20545 +0.8 1.1 hypothetical protein compare
BPHYT_RS16570 +0.8 1.1 glutathione S-transferase compare
BPHYT_RS29325 +0.8 3.3 histidine kinase compare
BPHYT_RS07055 +0.8 1.7 sulfotransferase compare
BPHYT_RS01730 +0.8 1.3 serine/threonine protein kinase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments