Experiment set39S297 for Burkholderia phytofirmans PsJN

Compare to:

24hr PHYTO1 MOI 1

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS14855 +3.5 1.8 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS19565 +2.8 20.2 gamma-glutamyl:cysteine ligase compare
BPHYT_RS19570 +2.7 22.6 sodium/hydrogen exchanger compare
BPHYT_RS14140 +2.4 7.7 phosphate transporter permease subunit PstC compare
BPHYT_RS02595 +2.3 3.0 sulfurtransferase compare
BPHYT_RS33820 +2.3 21.8 histidine kinase compare
BPHYT_RS25935 +2.2 1.8 type III secretion protein compare
BPHYT_RS11705 +1.9 2.3 hypothetical protein compare
BPHYT_RS02905 +1.9 17.0 RNA polymerase subunit sigma-54 compare
BPHYT_RS33920 +1.9 14.3 type II citrate synthase compare
BPHYT_RS12845 +1.8 14.0 ATPase compare
BPHYT_RS06610 +1.8 1.9 triosephosphate isomerase compare
BPHYT_RS05155 +1.7 9.4 acetyltransferase GCN5 compare
BPHYT_RS09330 +1.7 15.6 phytoene synthase compare
BPHYT_RS26025 +1.7 1.3 hypothetical protein compare
BPHYT_RS06075 +1.7 11.8 hypothetical protein compare
BPHYT_RS13645 +1.7 15.0 threonine--tRNA ligase compare
BPHYT_RS04945 +1.7 15.1 membrane protein compare
BPHYT_RS04950 +1.7 12.6 hypothetical protein compare
BPHYT_RS06530 +1.6 2.0 membrane protein compare
BPHYT_RS02540 +1.6 4.5 hypothetical protein compare
BPHYT_RS05575 +1.6 13.9 Fis family transcriptional regulator compare
BPHYT_RS14400 +1.6 4.1 anti-sigma factor compare
BPHYT_RS12725 +1.6 14.9 regulator compare
BPHYT_RS06985 +1.6 11.8 fumarate hydratase compare
BPHYT_RS23460 +1.6 1.4 AraC family transcriptional regulator compare
BPHYT_RS05560 +1.5 12.2 Fis family transcriptional regulator compare
BPHYT_RS05590 +1.5 13.0 trehalose-6-phosphate synthase compare
BPHYT_RS02650 +1.5 4.6 membrane protein compare
BPHYT_RS33400 +1.5 4.0 magnesium transporter CorA compare
BPHYT_RS18600 +1.5 3.0 glutathione S-transferase compare
BPHYT_RS28830 +1.4 1.3 LysR family transcriptional regulator compare
BPHYT_RS09500 +1.4 4.2 glucose-6-phosphate isomerase compare
BPHYT_RS16335 +1.4 4.2 membrane protein compare
BPHYT_RS07570 +1.4 1.7 hypothetical protein compare
BPHYT_RS20750 +1.4 1.9 LacI family transcriptional regulator compare
BPHYT_RS01340 +1.3 2.7 ChrB domain-containing protein compare
BPHYT_RS07255 +1.3 3.3 4-oxalocrotonate decarboxylase compare
BPHYT_RS09390 +1.3 3.1 ABC transporter permease compare
BPHYT_RS28930 +1.3 2.0 chromosome partitioning protein ParA compare
BPHYT_RS14145 +1.3 7.3 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS16175 +1.3 1.1 hemolysin D compare
BPHYT_RS04940 +1.3 2.0 hypothetical protein compare
BPHYT_RS34185 +1.3 3.7 cold-shock protein compare
BPHYT_RS23910 +1.3 3.4 phosphoribosyl-dephospho-CoA transferase compare
BPHYT_RS08945 +1.2 8.2 hypothetical protein compare
BPHYT_RS31255 +1.2 1.6 cytochrome B561 compare
BPHYT_RS12150 +1.2 9.3 PII uridylyl-transferase compare
BPHYT_RS09690 +1.2 1.9 phosphate starvation-inducible protein PsiF compare
BPHYT_RS14395 +1.2 6.6 sugar dehydratase compare
BPHYT_RS29855 +1.2 1.4 protein-tyrosine-phosphatase compare
BPHYT_RS01630 +1.2 1.4 ATP-dependent protease ATPase subunit HslU compare
BPHYT_RS25845 +1.2 1.2 RND transporter MFP subunit compare
BPHYT_RS26300 +1.2 1.2 ATP-dependent DNA ligase compare
BPHYT_RS16340 +1.2 5.4 succinyl-CoA synthetase subunit alpha compare
BPHYT_RS09660 +1.2 6.4 trehalose-6-phosphate synthase compare
BPHYT_RS02525 +1.2 5.4 membrane protein compare
BPHYT_RS02640 +1.1 7.7 cytochrome C oxidase compare
BPHYT_RS17525 +1.1 1.5 glutaredoxin compare
BPHYT_RS06195 +1.1 1.5 membrane protein compare
BPHYT_RS05705 +1.1 1.3 hypothetical protein compare
BPHYT_RS05025 +1.1 1.7 sugar ABC transporter substrate-binding protein compare
BPHYT_RS04965 +1.1 7.5 ATP-binding protein compare
BPHYT_RS07960 +1.1 1.1 hypothetical protein compare
BPHYT_RS26550 +1.1 1.4 Fis family transcriptional regulator compare
BPHYT_RS14485 +1.1 4.6 ribonuclease E compare
BPHYT_RS27370 +1.1 1.3 CoA transferase compare
BPHYT_RS03830 +1.1 2.0 hypothetical protein compare
BPHYT_RS26040 +1.1 2.4 cysteine hydrolase compare
BPHYT_RS18655 +1.1 3.5 3-oxoacyl-ACP synthase compare
BPHYT_RS15320 +1.1 2.1 hypothetical protein compare
BPHYT_RS09640 +1.1 4.6 DNAase compare
BPHYT_RS31225 +1.0 2.7 D-alanyl-D-alanine dipeptidase compare
BPHYT_RS25800 +1.0 1.2 sugar ABC transporter permease compare
BPHYT_RS12465 +1.0 1.9 inositol monophosphatase compare
BPHYT_RS35215 +1.0 1.6 dehydrogenase compare
BPHYT_RS24630 +1.0 1.8 (2Fe-2S)-binding protein compare
BPHYT_RS33695 +1.0 2.4 molybdenum ABC transporter ATPase compare
BPHYT_RS16060 +1.0 2.6 ribonucleotide-diphosphate reductase subunit alpha compare
BPHYT_RS26510 +1.0 1.5 transcriptional regulator compare
BPHYT_RS02865 +1.0 0.8 hypothetical protein compare
BPHYT_RS00900 +1.0 2.4 beta-lactamase compare
BPHYT_RS09160 +1.0 4.6 polyhydroxyalkanoate synthesis repressor PhaR compare
BPHYT_RS05610 +1.0 5.9 DNA-cytosine methyltransferase compare
BPHYT_RS26590 +1.0 3.4 DNA-3-methyladenine glycosylase compare
BPHYT_RS24135 +1.0 2.7 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS24305 +1.0 1.8 glutathione S-transferase compare
BPHYT_RS13935 +1.0 1.2 mannosyltransferase compare
BPHYT_RS04005 +1.0 1.5 GDP-L-fucose synthase compare
BPHYT_RS00690 +1.0 0.9 transcriptional regulator compare
BPHYT_RS25980 +1.0 0.9 urea carboxylase compare
BPHYT_RS26030 +1.0 2.1 cysteine hydrolase compare
BPHYT_RS05290 +1.0 1.0 hypothetical protein compare
BPHYT_RS14880 +1.0 1.9 integration host factor subunit beta compare
BPHYT_RS18340 +1.0 1.2 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS08850 +1.0 0.5 transcriptional regulator compare
BPHYT_RS33155 +1.0 1.7 hypothetical protein compare
BPHYT_RS30995 +1.0 0.5 glucose-1-phosphate thymidylyltransferase compare
BPHYT_RS16390 +1.0 3.4 MarR family transcriptional regulator compare
BPHYT_RS10320 +1.0 2.2 hypothetical protein compare
BPHYT_RS14340 +1.0 6.3 Fis family transcriptional regulator compare
BPHYT_RS17095 +1.0 3.5 proline--tRNA ligase compare
BPHYT_RS13200 +1.0 1.8 molybdopterin binding oxidoreductase compare
BPHYT_RS21860 +1.0 1.3 hypothetical protein compare
BPHYT_RS02665 +1.0 7.7 MFS transporter compare
BPHYT_RS11795 +1.0 0.9 membrane protein compare
BPHYT_RS07720 +1.0 4.1 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) compare
BPHYT_RS06070 +1.0 5.3 cytochrome C compare
BPHYT_RS12840 +1.0 2.3 pyruvate dehydrogenase compare
BPHYT_RS18635 +1.0 1.7 LamB/YcsF family protein compare
BPHYT_RS22455 +0.9 0.8 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS34035 +0.9 1.7 type II and III secretion system outermembrane protein, secretin compare
BPHYT_RS03620 +0.9 6.2 poly(A) polymerase compare
BPHYT_RS18705 +0.9 1.0 5,10-methylenetetrahydrofolate reductase compare
BPHYT_RS28860 +0.9 1.1 haloacid dehalogenase compare
BPHYT_RS01455 +0.9 1.0 peptide deformylase compare
BPHYT_RS06065 +0.9 4.7 cytochrome C compare
BPHYT_RS11895 +0.9 2.1 peroxiredoxin compare
BPHYT_RS23615 +0.9 1.9 XRE family transcriptional regulator compare
BPHYT_RS30810 +0.9 1.6 transcriptional regulator compare
BPHYT_RS16430 +0.9 8.1 cytochrome C compare
BPHYT_RS01170 +0.9 1.9 hypothetical protein compare
BPHYT_RS16435 +0.9 7.9 alcohol dehydrogenase compare
BPHYT_RS17100 +0.9 3.6 RNA pyrophosphohydrolase compare
BPHYT_RS10145 +0.9 1.6 Mn-containing catalase compare
BPHYT_RS11810 +0.9 0.9 LysR family transcriptional regulator compare
BPHYT_RS02635 +0.9 5.7 membrane protein compare
BPHYT_RS08135 +0.9 1.6 hypothetical protein compare
BPHYT_RS09280 +0.9 0.7 pyridoxal-5'-phosphate-dependent protein subunit beta compare
BPHYT_RS26625 +0.9 1.5 lipoprotein signal peptide compare
BPHYT_RS12990 +0.9 2.3 iron transporter compare
BPHYT_RS07860 +0.9 1.3 benzoate 1,2-dioxygenase subunit beta compare
BPHYT_RS05670 +0.9 2.1 hypothetical protein compare
BPHYT_RS21475 +0.9 1.5 hypothetical protein compare
BPHYT_RS11555 +0.9 1.8 allantoinase compare
BPHYT_RS14585 +0.9 1.3 hypothetical protein compare
BPHYT_RS04430 +0.9 1.1 amino acid ABC transporter ATPase compare
BPHYT_RS09600 +0.9 2.5 hypothetical protein compare
BPHYT_RS30935 +0.9 2.2 MFS transporter compare
BPHYT_RS09445 +0.9 2.5 trigger factor compare
BPHYT_RS35530 +0.8 1.1 arsenate reductase compare
BPHYT_RS12290 +0.8 1.8 universal stress protein UspA compare
BPHYT_RS26895 +0.8 1.7 nicotinate phosphoribosyltransferase compare
BPHYT_RS07055 +0.8 3.7 sulfotransferase compare
BPHYT_RS31615 +0.8 1.5 thiamine pyrophosphate protein compare
BPHYT_RS24925 +0.8 1.5 cytochrome O ubiquinol oxidase compare
BPHYT_RS32495 +0.8 1.9 ABC transporter compare
BPHYT_RS34485 +0.8 3.0 diguanylate phosphodiesterase compare
BPHYT_RS16345 +0.8 2.7 succinyl-CoA ligase [ADP-forming] subunit beta compare
BPHYT_RS20095 +0.8 0.9 transcriptional regulator compare
BPHYT_RS04290 +0.8 0.5 glycosyl transferase family 2 compare
BPHYT_RS32960 +0.8 1.7 short-chain dehydrogenase compare
BPHYT_RS10675 +0.8 1.1 muconate cycloisomerase compare
BPHYT_RS10645 +0.8 0.7 cyanate hydratase compare
BPHYT_RS27410 +0.8 1.1 amidohydrolase compare
BPHYT_RS13555 +0.8 1.2 acyl-CoA dehydrogenase compare
BPHYT_RS09145 +0.8 5.7 poly-beta-hydroxybutyrate polymerase compare
BPHYT_RS05700 +0.8 1.4 hypothetical protein compare
BPHYT_RS29475 +0.8 1.4 carbon-phosphorus lyase complex subunit PhnJ compare
BPHYT_RS33150 +0.8 0.9 beta-lactamase compare
BPHYT_RS12635 +0.8 2.1 translation factor Sua5 compare
BPHYT_RS09815 +0.8 1.9 malate synthase compare
BPHYT_RS07925 +0.8 1.9 glutamine amidotransferase compare
BPHYT_RS32260 +0.8 0.7 hypothetical protein compare
BPHYT_RS26160 +0.8 1.8 membrane protein compare
BPHYT_RS24045 +0.8 2.2 amino acid ABC transporter compare
BPHYT_RS06105 +0.8 0.9 hypothetical protein compare
BPHYT_RS28535 +0.8 0.9 response regulator receiver compare
BPHYT_RS22540 +0.8 1.3 metal ABC transporter permease compare
BPHYT_RS05255 +0.8 1.8 phage abortive infection protein compare
BPHYT_RS32525 +0.8 1.3 hypothetical protein compare
BPHYT_RS22730 +0.8 1.0 serine/threonine kinase compare
BPHYT_RS14370 +0.8 2.6 ribonuclease III compare
BPHYT_RS20070 +0.8 0.9 hypothetical protein compare
BPHYT_RS29835 +0.8 1.9 glycosyltransferase compare
BPHYT_RS21575 +0.8 2.1 hypothetical protein compare
BPHYT_RS03015 +0.8 0.9 aldolase compare
BPHYT_RS17545 +0.8 3.3 cold-shock protein compare
BPHYT_RS21725 +0.8 1.4 taurine ABC transporter substrate-binding protein compare
BPHYT_RS13765 +0.8 1.7 LysR family transcriptional regulator compare
BPHYT_RS28075 +0.8 1.0 cytochrome B561 compare
BPHYT_RS28370 +0.8 1.1 peroxidase compare
BPHYT_RS08295 +0.8 1.4 TetR family transcriptional regulator compare
BPHYT_RS03625 +0.8 4.4 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
BPHYT_RS27890 +0.8 0.4 hypothetical protein compare
BPHYT_RS20220 +0.8 0.7 antibiotic synthesis protein MbtH compare
BPHYT_RS04285 +0.8 0.4 rhamnosyltransferase compare
BPHYT_RS29100 +0.8 0.9 ketosteroid isomerase compare
BPHYT_RS32475 +0.8 1.3 dihydroxyacetone kinase compare
BPHYT_RS25165 +0.8 1.2 HTH-type transcriptional regulator BetI compare
BPHYT_RS09695 +0.8 0.9 hypothetical protein compare
BPHYT_RS30990 +0.8 1.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BPHYT_RS23540 +0.8 1.6 RND transporter compare
BPHYT_RS04010 +0.8 0.6 glycosyl transferase compare
BPHYT_RS33120 +0.7 1.7 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
BPHYT_RS14180 +0.7 0.8 membrane protein compare
BPHYT_RS31900 +0.7 1.3 short-chain dehydrogenase/reductase SDR compare
BPHYT_RS34025 +0.7 1.0 hypothetical protein compare
BPHYT_RS11765 +0.7 0.5 polyamine ABC transporter permease compare
BPHYT_RS15325 +0.7 1.8 ribonuclease PH compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments