Experiment set39S294 for Burkholderia phytofirmans PsJN

200 most important genes:

gene	name	fitness	t score	description
BPHYT_RS04330		-3.5	-8.1	hypothetical protein
BPHYT_RS33225		-3.2	-8.6	NAD-dependent epimerase/dehydratase
BPHYT_RS33185		-3.2	-4.3	methyltransferase type 11
BPHYT_RS22530		-3.2	-1.4	N5,N10-methylene tetrahydromethanopterin reductase
BPHYT_RS08150		-3.1	-0.9	membrane protein
BPHYT_RS36525		-3.0	-1.3	hypothetical protein
BPHYT_RS14550		-3.0	-0.9	tRNA-Asn
BPHYT_RS10135		-3.0	-0.9	hypothetical protein
BPHYT_RS29520		-2.9	-0.9	hypothetical protein
BPHYT_RS26470		-2.9	-0.9	MFS transporter
BPHYT_RS24175		-2.9	-2.2	C4-dicarboxylate ABC transporter
BPHYT_RS26080		-2.7	-0.8	ABC transporter ATPase
BPHYT_RS11400		-2.6	-1.9	hypothetical protein
BPHYT_RS05825		-2.5	-1.6	hypothetical protein
BPHYT_RS29745		-2.5	-1.7	phosphonopyruvate decarboxylase
BPHYT_RS05650		-2.5	-1.3	hypothetical protein
BPHYT_RS27430		-2.5	-1.1	LysR family transcriptional regulator
BPHYT_RS33580		-2.4	-4.0	geranyltranstransferase
BPHYT_RS17095		-2.4	-4.0	proline--tRNA ligase
BPHYT_RS13450		-2.4	-1.3	GntR family transcriptional regulator
BPHYT_RS03655		-2.3	-1.0	membrane protein
BPHYT_RS22940		-2.3	-1.2	pilus assembly protein TadE
BPHYT_RS21485		-2.3	-1.0	hypothetical protein
BPHYT_RS11635		-2.3	-0.7	RNA polymerase subunit sigma-24
BPHYT_RS13320		-2.2	-1.0	allantoate amidohydrolase
BPHYT_RS24315		-2.2	-1.2	phosphoribosyltransferase
BPHYT_RS01485		-2.1	-1.1	histidine kinase
BPHYT_RS23430		-2.1	-1.2	bifunctional D-altronate/D-mannonate dehydratase
BPHYT_RS29540		-2.1	-0.9	aldolase
BPHYT_RS30055		-2.1	-1.6	hypothetical protein
BPHYT_RS09365		-2.1	-1.7	cytochrome C2
BPHYT_RS31055		-2.1	-1.7	glycosyl transferase
BPHYT_RS19985		-2.0	-0.9	CoA-transferase
BPHYT_RS10540		-2.0	-0.9	secretion protein
BPHYT_RS26525		-2.0	-0.9	amino acid ABC transporter substrate-binding protein
BPHYT_RS08420		-1.9	-1.4	histidine kinase
BPHYT_RS22910		-1.9	-0.6	hypothetical protein
BPHYT_RS13325		-1.9	-1.4	TetR family transcriptional regulator
BPHYT_RS26025		-1.9	-0.6	hypothetical protein
BPHYT_RS17830		-1.9	-1.9	histidine kinase
BPHYT_RS35315		-1.9	-1.7	threonyl-tRNA synthetase
BPHYT_RS28480		-1.9	-1.9	hydroxyglutarate oxidase
BPHYT_RS09385		-1.8	-1.0	FAD-dependent oxidoreductase
BPHYT_RS23520		-1.8	-1.1	peroxidase
BPHYT_RS03730		-1.8	-1.8	transcriptional repressor NrdR
BPHYT_RS17900		-1.8	-2.4	hypothetical protein
BPHYT_RS27455		-1.8	-0.7	rod shape-determining protein MreB
BPHYT_RS26925		-1.8	-1.0	NIPSNAP family containing protein
BPHYT_RS03410		-1.8	-1.6	queuine tRNA-ribosyltransferase
BPHYT_RS07595		-1.7	-1.3	membrane protein
BPHYT_RS20235		-1.7	-3.9	iron ABC transporter
BPHYT_RS27850		-1.7	-0.9	hemerythrin
BPHYT_RS14605		-1.7	-2.0	sodium transporter
BPHYT_RS20245		-1.7	-2.9	iron ABC transporter substrate-binding protein
BPHYT_RS09890		-1.7	-2.2	choline dehydrogenase
BPHYT_RS31125		-1.7	-2.0	hypothetical protein
BPHYT_RS09465		-1.7	-1.1	transcriptional regulator
BPHYT_RS34780		-1.7	-2.5	phytoene synthase
BPHYT_RS20155		-1.7	-0.7	hypothetical protein
BPHYT_RS20065		-1.7	-1.8	hypothetical protein
BPHYT_RS33690		-1.6	-1.6	molybdate ABC transporter permease
BPHYT_RS14670		-1.6	-0.9	hypothetical protein
BPHYT_RS14840		-1.6	-4.2	lytic transglycosylase
BPHYT_RS09655		-1.6	-3.9	mechanosensitive ion channel protein MscS
BPHYT_RS25875		-1.6	-0.7	type III secretion protein
BPHYT_RS32150		-1.6	-1.5	hypothetical protein
BPHYT_RS08410		-1.6	-0.7	dehydrogenase
BPHYT_RS05940		-1.6	-2.2	membrane protein
BPHYT_RS10645		-1.6	-0.7	cyanate hydratase
BPHYT_RS30010		-1.6	-0.8	cell division protein
BPHYT_RS34490		-1.6	-0.7	hypothetical protein
BPHYT_RS03645		-1.5	-1.5	tRNA dimethylallyltransferase
BPHYT_RS22930		-1.5	-0.6	type II secretion system protein
BPHYT_RS10945		-1.5	-1.1	2-deoxy-D-gluconate 3-dehydrogenase
BPHYT_RS16555		-1.5	-2.5	cation transporter
BPHYT_RS07090		-1.5	-1.2	hypothetical protein
BPHYT_RS25780		-1.5	-0.4	DeoR faimly transcriptional regulator
BPHYT_RS19545		-1.5	-2.0	nuclear protein SET
BPHYT_RS07475		-1.5	-0.9	nitrate reductase
BPHYT_RS32360		-1.5	-0.9	spermidine/putrescine ABC transporter ATPase
BPHYT_RS21860		-1.5	-0.9	hypothetical protein
BPHYT_RS33180		-1.5	-4.4	hypothetical protein
BPHYT_RS29920		-1.4	-0.6	hypothetical protein
BPHYT_RS10125		-1.4	-1.0	hypothetical protein
BPHYT_RS08490		-1.4	-1.3	Crp/Fnr family transcriptional regulator
BPHYT_RS18610		-1.4	-3.3	lytic transglycosylase
BPHYT_RS22260		-1.4	-1.0	hypothetical protein
BPHYT_RS21950		-1.4	-1.2	RND transporter
BPHYT_RS23760		-1.4	-1.7	phosphonate ABC transporter permease
BPHYT_RS29485		-1.4	-1.1	phosphonate ABC transporter ATP-binding protein
BPHYT_RS09585		-1.4	-1.0	hypothetical protein
BPHYT_RS22000		-1.4	-1.5	hypothetical protein
BPHYT_RS23525		-1.3	-0.7	hypothetical protein
BPHYT_RS09710		-1.3	-2.5	undecaprenyl-phosphate glucose phosphotransferase
BPHYT_RS01280		-1.3	-1.1	hypothetical protein
BPHYT_RS17405		-1.3	-0.8	indole-3-glycerol phosphate synthase
BPHYT_RS21940		-1.3	-1.2	hemolysin D
BPHYT_RS05810		-1.3	-2.5	hypothetical protein
BPHYT_RS25705		-1.3	-1.6	aldehyde dehydrogenase
BPHYT_RS32675		-1.3	-1.1	2-methylcitrate dehydratase
BPHYT_RS17520		-1.3	-2.9	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
BPHYT_RS34815		-1.3	-0.8	ABC transporter
BPHYT_RS29850		-1.3	-0.7	protein tyrosine kinase
BPHYT_RS34810		-1.3	-1.3	RND transporter
BPHYT_RS02155		-1.3	-2.7	dithiobiotin synthetase
BPHYT_RS24955		-1.3	-1.4	cytochrome C peroxidase
BPHYT_RS27715		-1.3	-1.0	UspA domain-containing protein
BPHYT_RS34295		-1.3	-0.8	fimbrial protein
BPHYT_RS33460		-1.3	-0.7	protocatechuate 3,4-dioxygenase subunit alpha
BPHYT_RS10950		-1.3	-1.9	transcriptional regulator
BPHYT_RS28300		-1.2	-0.5	histone nucleoid-structuring protein H-NS
BPHYT_RS34260		-1.2	-1.8	hypothetical protein
BPHYT_RS02765		-1.2	-0.8	cytochrome BD oxidase subunit I
BPHYT_RS06260		-1.2	-2.5	MFS transporter
BPHYT_RS19305		-1.2	-2.9	ATP-dependent DNA helicase Rep
BPHYT_RS08525		-1.2	-0.5	SAM-dependent methyltransferase
BPHYT_RS25110		-1.2	-1.0	sarcosine oxidase subunit delta
BPHYT_RS26990		-1.2	-1.7	GntR family transcriptional regulator
BPHYT_RS04060		-1.2	-1.9	glycosyl transferase
BPHYT_RS31320		-1.2	-1.4	hypothetical protein
BPHYT_RS24630		-1.2	-1.1	(2Fe-2S)-binding protein
BPHYT_RS30745		-1.2	-1.3	hypothetical protein
BPHYT_RS04325		-1.2	-3.2	acyltransferase 3
BPHYT_RS03110		-1.2	-1.6	MarR family transcriptional regulator
BPHYT_RS09755		-1.2	-1.0	glycosyl transferase family 1
BPHYT_RS20215		-1.2	-2.2	RNA polymerase sigma 70
BPHYT_RS32055		-1.2	-1.4	hypothetical protein
BPHYT_RS20185		-1.2	-1.1	sugar transferase
BPHYT_RS22500		-1.2	-1.3	transcriptional regulator
BPHYT_RS09230		-1.2	-2.0	NADPH:quinone reductase
BPHYT_RS33155		-1.2	-1.3	hypothetical protein
BPHYT_RS28930		-1.2	-0.8	chromosome partitioning protein ParA
BPHYT_RS27305		-1.2	-0.5	hypothetical protein
BPHYT_RS23475		-1.2	-0.7	luciferase
BPHYT_RS34760		-1.2	-2.8	sensor histidine kinase
BPHYT_RS05065		-1.2	-1.6	DNA mismatch repair protein MutS
BPHYT_RS29750		-1.2	-1.3	phosphoenolpyruvate phosphomutase
BPHYT_RS09860		-1.2	-0.5	pilus assembly protein PilP
BPHYT_RS05315		-1.2	-2.7	hydrolase
BPHYT_RS25805		-1.2	-1.9	deoxyribose kinase (EC 2.7.1.15) (from data)
BPHYT_RS04610		-1.2	-1.7	type VI secretion protein ImpA
BPHYT_RS04490		-1.1	-2.1	hypothetical protein
BPHYT_RS02300		-1.1	-0.8	acid shock protein
BPHYT_RS35655		-1.1	-1.4	hypothetical protein
BPHYT_RS09280		-1.1	-0.5	pyridoxal-5'-phosphate-dependent protein subunit beta
BPHYT_RS08030		-1.1	-1.8	transposase
BPHYT_RS17890		-1.1	-0.8	shikimate kinase
BPHYT_RS25395		-1.1	-1.1	3-oxoacyl-ACP reductase
BPHYT_RS01240		-1.1	-1.2	hypothetical protein
BPHYT_RS09100		-1.1	-4.3	stationary phase survival protein SurE
BPHYT_RS31150		-1.1	-1.9	transcriptional regulator
BPHYT_RS28680		-1.1	-1.3	porin
BPHYT_RS21615		-1.1	-1.2	FMN-dependent NADH-azoreductase
BPHYT_RS18465		-1.1	-5.5	membrane protein
BPHYT_RS30995		-1.1	-0.3	glucose-1-phosphate thymidylyltransferase
BPHYT_RS07320		-1.1	-0.7	dihydrodipicolinate synthetase
BPHYT_RS29650		-1.1	-2.1	3-oxoacyl-ACP reductase
BPHYT_RS11530		-1.1	-1.6	5-hydroxyisourate hydrolase
BPHYT_RS09565		-1.1	-1.0	acetyl-CoA acetyltransferase
BPHYT_RS31675		-1.1	-1.3	hypothetical protein
BPHYT_RS29015		-1.1	-0.8	RND transporter
BPHYT_RS11235		-1.1	-0.6	hypothetical protein
BPHYT_RS12925		-1.1	-0.4	exodeoxyribonuclease III
BPHYT_RS14715		-1.0	-3.0	molybdenum cofactor biosynthesis protein MogA
BPHYT_RS12820		-1.0	-3.6	D-alanyl-D-alanine carboxypeptidase
BPHYT_RS02570		-1.0	-5.1	phosphocarrier protein HPr
BPHYT_RS31680		-1.0	-2.3	dehydrogenase
BPHYT_RS07095		-1.0	-0.9	LysR family transcriptional regulator
BPHYT_RS34655		-1.0	-0.8	2-amino-3-ketobutyrate CoA ligase
BPHYT_RS05905		-1.0	-0.6	hypothetical protein
BPHYT_RS29150		-1.0	-1.5	lysine transporter LysE
BPHYT_RS31900		-1.0	-1.1	short-chain dehydrogenase/reductase SDR
BPHYT_RS02760		-1.0	-0.6	cytochrome BD oxidase subunit II
BPHYT_RS03280		-1.0	-0.6	mannose-1-phosphate guanylyltransferase
BPHYT_RS05435		-1.0	-3.0	ABC transporter substrate-binding protein
BPHYT_RS03065		-1.0	-0.8	LuxR family transcriptional regulator
BPHYT_RS07130		-1.0	-0.9	biopolymer transporter ExbD
BPHYT_RS23855		-1.0	-1.8	hypothetical protein
BPHYT_RS29380		-1.0	-1.1	hypothetical protein
BPHYT_RS04255		-1.0	-1.4	diadenosine tetraphosphatase
BPHYT_RS08165		-1.0	-0.9	pilus assembly protein TadE
BPHYT_RS20095		-1.0	-0.6	transcriptional regulator
BPHYT_RS26185		-1.0	-0.5	thioesterase
BPHYT_RS28790		-1.0	-0.9	membrane protein
BPHYT_RS35405		-1.0	-1.2	hypothetical protein
BPHYT_RS04890		-1.0	-0.7	cobalamin biosynthesis protein CobD
BPHYT_RS20225		-1.0	-3.9	taurine catabolism dioxygenase tauD/tfdA
BPHYT_RS22290		-1.0	-2.3	membrane protein
BPHYT_RS13055		-1.0	-1.3	short-chain dehydrogenase
BPHYT_RS17430		-1.0	-2.1	thiol:disulfide interchange protein
BPHYT_RS31415		-1.0	-0.8	amino acid ABC transporter permease
BPHYT_RS31290		-1.0	-1.2	histidine kinase
BPHYT_RS18630		-1.0	-1.4	allophanate hydrolase
BPHYT_RS10940		-1.0	-2.2	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
BPHYT_RS29655		-1.0	-1.1	polysaccharide deacetylase
BPHYT_RS21060		-1.0	-2.2	hypothetical protein
BPHYT_RS11125		-1.0	-0.6	alkylhydroperoxidase
BPHYT_RS21770		-1.0	-1.1	aldehyde dehydrogenase
BPHYT_RS33845		-1.0	-0.8	bacteriocin production protein
BPHYT_RS16195		-1.0	-2.2	carbon monoxide dehydrogenase subunit G

Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in phage experiments