Experiment set38S727 for Burkholderia phytofirmans PsJN

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Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days

Group: in planta
Media: + Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days
Culturing: BFirm_ML3b, pot, at 24 (C), (Solid)
By: Marta Torres on 1-May-24

Specific Phenotypes

For 1 genes in this experiment

For in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days in Burkholderia phytofirmans PsJN

For in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days across organisms

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
L-glutamine degradation I 1 1 1
L-glutamate biosynthesis I 2 2 1
ammonia assimilation cycle III 3 3 1
guanosine ribonucleotides de novo biosynthesis 4 4 1
L-asparagine biosynthesis III (tRNA-dependent) 4 4 1
glutaminyl-tRNAgln biosynthesis via transamidation 4 3 1
superpathway of guanosine nucleotides de novo biosynthesis I 6 6 1
L-glutamate and L-glutamine biosynthesis 7 7 1
superpathway of guanosine nucleotides de novo biosynthesis II 8 7 1
L-citrulline biosynthesis 8 6 1
superpathway of L-citrulline metabolism 12 8 1
superpathway of purine nucleotide salvage 14 12 1
superpathway of purine nucleotides de novo biosynthesis I 21 21 1
superpathway of purine nucleotides de novo biosynthesis II 26 24 1
superpathway of histidine, purine, and pyrimidine biosynthesis 46 44 1