Experiment set36S487 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Stool_Day8_Mouse7

200 most important genes:

  gene name fitness t score description  
BT1757 -4.1 -2.8 fructokinase (NCBI ptt file) compare
p5482_02 -3.9 -3.8 hypothetical protein (NCBI) compare
BT4002 -3.8 -1.3 ATPase, ParA family (NCBI ptt file) compare
BT4061 -3.6 -2.5 NADH dehydrogenase I, chain K (NCBI ptt file) compare
BT3733 -3.5 -5.3 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT2302 -3.2 -1.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4066 -3.2 -7.4 NADH dehydrogenase I, chain B (NCBI ptt file) compare
BT3688 -3.0 -5.8 putative acetyltransferase (NCBI ptt file) compare
BT3338 -3.0 -3.6 RND efflux system, inner membrane component BipB (from data) compare
BT4304 -3.0 -10.1 putative glycosyltransferase (NCBI ptt file) compare
BT3337 -3.0 -3.6 RND efflux system, outer membrane component BipA (from data) compare
BT3933 -3.0 -2.0 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT3554 -2.9 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0875 -2.9 -2.0 beta-ureidopropionase (NCBI ptt file) compare
BT3320 -2.9 -2.0 dihydrodipicolinate reductase (NCBI ptt file) compare
BT0261 -2.8 -1.9 hypothetical protein (NCBI ptt file) compare
BT4195 -2.7 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT2074 -2.7 -6.7 ketol-acid reductoisomerase (NCBI ptt file) compare
BT4060 -2.7 -9.9 NADH dehydrogenase I, chain L (NCBI ptt file) compare
BT1607 -2.6 -1.8 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1843 -2.6 -1.8 adenylosuccinate synthetase (NCBI ptt file) compare
BT4305 -2.6 -5.9 putative alpha-amylase (NCBI ptt file) compare
BT4174 -2.6 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT0035 -2.6 -2.5 hypothetical protein (NCBI ptt file) compare
BT4059 -2.5 -7.6 NADH dehydrogenase I, chain M (NCBI ptt file) compare
BT2415 -2.5 -1.7 aspartate aminotransferase (NCBI ptt file) compare
BT4058 -2.4 -7.1 NADH dehydrogenase I, chain N (NCBI ptt file) compare
BT4043 -2.4 -5.3 dimethyladenosine transferase (NCBI ptt file) compare
BT4049 -2.4 -2.8 putative ArgK protein with ATPase and kinase domains (NCBI ptt file) compare
BT3821 -2.4 -5.0 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT4303 -2.4 -10.1 glycogen debranching enzyme-related protein (4-alpha-glucanotransferase) (NCBI ptt file) compare
BT0146 -2.3 -4.2 unsaturated glucuronyl hydrolase (NCBI ptt file) compare
BT0180 -2.3 -2.3 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT1374 -2.3 -1.6 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT2266 -2.2 -2.2 hypothetical protein (NCBI ptt file) compare
BT0892 -2.2 -1.3 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT4416 -2.2 -2.1 Cu2+ homeostasis protein CutC (NCBI ptt file) compare
BT3442 -2.2 -14.9 conserved hypothetical protein (NCBI ptt file) compare
BT4065 -2.2 -5.4 NADH dehydrogenase I, chain D (NCBI ptt file) compare
BT2787 -2.1 -12.3 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) compare
BT1844 -2.1 -2.1 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT1957 -2.1 -6.6 hypothetical protein (NCBI ptt file) compare
BT0700 -2.1 -1.4 GTP pyrophosphokinase (NCBI ptt file) compare
BT0353 -2.1 -3.7 putative sugar epimerase/aldolase (NCBI ptt file) compare
BT3936 -2.1 -1.4 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT2261 -2.1 -7.0 hypothetical protein (NCBI ptt file) compare
BT3339 -2.1 -1.4 RND efflux system, membrane fusion component BipC (from data) compare
BT1758 -2.1 -1.4 fructose transporter (from data) compare
BT2798 -2.0 -9.3 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT3193 -2.0 -8.9 putative coenzyme A transferase (NCBI ptt file) compare
BT1355 -2.0 -4.0 hypothetical protein (NCBI ptt file) compare
BT4379 -2.0 -5.1 putative oxalate:formate antiporter (NCBI ptt file) compare
BT2264 -2.0 -12.1 outer membrane protein Omp121 (NCBI ptt file) compare
BT4151 -2.0 -8.1 beta-glucuronidase (NCBI ptt file) compare
BT3439 -2.0 -8.5 hypothetical protein (NCBI ptt file) compare
BT1270 -2.0 -1.4 putative Na+/H+ antiporter (NCBI ptt file) compare
BT2263 -2.0 -6.4 hypothetical protein (NCBI ptt file) compare
BT2684 -2.0 -1.3 hypothetical protein (NCBI ptt file) compare
BT1375 -1.9 -1.3 aspartokinase (NCBI ptt file) compare
BT2843 -1.9 -1.3 integrase (NCBI ptt file) compare
BT2173 -1.9 -3.8 hypothetical protein (NCBI ptt file) compare
BT0555 -1.9 -1.3 amidophosphoribosyltransferase (NCBI ptt file) compare
BT4372 -1.9 -6.0 conserved hypothetical protein (NCBI ptt file) compare
BT2169 -1.9 -2.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4191 -1.9 -1.3 hypothetical protein (NCBI ptt file) compare
BT4063 -1.9 -1.3 NADH dehydrogenase I, chain I (NCBI ptt file) compare
BT4720 -1.8 -1.3 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3138 -1.8 -9.3 hypothetical protein (NCBI ptt file) compare
BT3220 -1.8 -3.9 TPR-repeat-containing protein (NCBI ptt file) compare
BT2262 -1.8 -4.5 hypothetical protein (NCBI ptt file) compare
BT1347 -1.8 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT2170 -1.8 -3.2 hypothetical protein (NCBI ptt file) compare
BT2167 -1.8 -2.7 elongation factor G (NCBI ptt file) compare
BT0967 -1.7 -1.0 hypothetical protein (NCBI ptt file) compare
BT1684 -1.7 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0797 -1.7 -2.0 transcriptional regulator, ArsR family (NCBI ptt file) compare
BT4062 -1.7 -2.3 NADH dehydrogenase I, chain J (NCBI ptt file) compare
BT3253 -1.7 -1.2 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT1068 -1.7 -2.5 hypothetical protein (NCBI ptt file) compare
BT4764 -1.7 -1.5 hypothetical protein (NCBI ptt file) compare
BT3761 -1.7 -2.5 N-succinylglutamate synthase (from data) compare
BT3164 -1.7 -5.5 quinolinate synthetase A (NCBI ptt file) compare
BT3073 -1.7 -5.9 putative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domain (NCBI ptt file) compare
BT4067 -1.7 -2.6 NADH dehydrogenase I, chain A (NCBI ptt file) compare
BT0972 -1.7 -1.6 putative oxidoreductase (NCBI ptt file) compare
BT0708 -1.7 -2.2 hypothetical protein (NCBI ptt file) compare
BT4150 -1.7 -6.3 putative rhamnogalacturonan acetylesterase (NCBI ptt file) compare
BT1953 -1.7 -2.3 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT4271 -1.7 -1.6 hypothetical protein (NCBI ptt file) compare
BT0556 -1.6 -1.1 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT3022 -1.6 -1.2 hypothetical protein (NCBI ptt file) compare
BT3550 -1.6 -1.1 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT0827 -1.6 -1.9 hypothetical protein (NCBI ptt file) compare
BT0219 -1.6 -2.6 thioredoxin C-2 (NCBI ptt file) compare
BT0256 -1.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT_2008 -1.6 -0.9 hypothetical protein (RefSeq) compare
BT1958 -1.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT1361 -1.6 -3.0 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT4599 -1.6 -3.2 putative transcriptional regulator (NCBI ptt file) compare
BT3184 -1.6 -9.1 L-aspartate oxidase (NCBI ptt file) compare
BT1340 -1.6 -2.4 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT0350 -1.6 -1.5 ribulokinase (EC 2.7.1.16) (from data) compare
BT0728 -1.5 -1.5 transcriptional regulator (NCBI ptt file) compare
BT0185 -1.5 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT2003 -1.5 -1.0 putative membrane peptidase (NCBI ptt file) compare
BT0156 -1.5 -1.5 transcriptional regulator (NCBI ptt file) compare
BT1871 -1.5 -5.4 putative alpha-glucosidase (NCBI ptt file) compare
BT0831 -1.5 -5.1 ATP-dependent RNA helicase (NCBI ptt file) compare
BT2161 -1.5 -2.4 50S ribosomal protein L9 (NCBI ptt file) compare
BT2470 -1.5 -4.2 hypothetical protein (NCBI ptt file) compare
BT3655 -1.5 -6.0 arabinosidase (NCBI ptt file) compare
BT1112 -1.5 -0.9 transposase (NCBI ptt file) compare
BT3210 -1.5 -1.4 cell division protein FtsX (NCBI ptt file) compare
BT1515 -1.5 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT0372 -1.5 -1.4 aldose 1-epimerase precursor (NCBI ptt file) compare
BT3249 -1.5 -4.7 putative zinc ABC transporter, zinc-binding protein (NCBI ptt file) compare
BT4341 -1.5 -4.0 hypothetical protein (NCBI ptt file) compare
BT2153 -1.5 -1.0 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT0638 -1.5 -1.7 putative methionine aminopeptidase A (NCBI ptt file) compare
BT0320 -1.4 -1.8 hypothetical protein (NCBI ptt file) compare
BT1222 -1.4 -1.0 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT3712 -1.4 -1.0 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT3427 -1.4 -4.1 conserved hypothetical protein (NCBI ptt file) compare
BT1232 -1.4 -1.2 hypothetical protein (NCBI ptt file) compare
BT0557 -1.4 -4.2 carbamyl phosphate synthetase (NCBI ptt file) compare
BT4610 -1.4 -1.0 RecA (NCBI ptt file) compare
BT0155 -1.4 -4.7 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT3981 -1.4 -1.0 hypothetical protein (NCBI ptt file) compare
BT4193 -1.4 -2.1 dipeptidyl peptidase IV (NCBI ptt file) compare
BT3902 -1.4 -3.5 conserved hypothetical protein (NCBI ptt file) compare
BT1343 -1.4 -1.9 putative capsule biosynthesis protein (NCBI ptt file) compare
BT4644 -1.4 -0.9 putative anti-sigma factor (NCBI ptt file) compare
BT0370 -1.4 -1.3 galactokinase (NCBI ptt file) compare
BT2247 -1.4 -1.8 putative ryanodine receptor (NCBI ptt file) compare
BT2467 -1.4 -2.4 hypothetical protein (NCBI ptt file) compare
BT0561 -1.4 -2.5 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT3348 -1.4 -3.6 unsaturated glucuronide lyase acting on chondroitin/heparin disaccharides (EC 3.2.1.180) (from data) compare
BT1287 -1.4 -3.7 hypothetical protein (NCBI ptt file) compare
BT1276 -1.4 -1.8 L-fucose mutarotase FucU (EC 5.1.3.29) (from data) compare
BT1081 -1.3 -0.9 recombination protein recR (NCBI ptt file) compare
BT0593 -1.3 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT4574 -1.3 -3.9 conserved hypothetical protein (NCBI ptt file) compare
BT3438 -1.3 -0.9 hypothetical protein (NCBI ptt file) compare
BT1955 -1.3 -3.5 putative cell wall biogenesis protein (NCBI ptt file) compare
BT0548 -1.3 -0.9 diaminopimelate epimerase (NCBI ptt file) compare
BT3812 -1.3 -2.3 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT4557 -1.3 -3.5 hypothetical protein (NCBI ptt file) compare
BT2976 -1.3 -5.0 FKBP-type peptidyl-prolyl cis-trans isomerase, outer membrane protein precursor (NCBI ptt file) compare
BT1456 -1.3 -1.9 thioredoxin (TRX) (NCBI ptt file) compare
BT3717 -1.3 -1.3 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0376 -1.3 -1.0 putative transcriptional regulator (NCBI ptt file) compare
BT0838 -1.3 -1.9 putative RNA methyltransferase (NCBI ptt file) compare
BT2942 -1.3 -4.8 putative multidrug resistance protein (NCBI ptt file) compare
BT0782 -1.3 -0.8 hypothetical protein (NCBI ptt file) compare
BT2413 -1.3 -5.1 homoserine O-succinyltransferase (NCBI ptt file) compare
BT1979 -1.3 -2.2 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT4173 -1.3 -5.5 putative rhamnogalacturonan acetylesterase (NCBI ptt file) compare
BT0258 -1.3 -4.4 glucosamine-6-phosphate isomerase (NCBI ptt file) compare
BT0526 -1.3 -2.8 L-asparaginase I (NCBI ptt file) compare
BT0486 -1.2 -4.1 altronate hydrolase (NCBI ptt file) compare
BT0503 -1.2 -1.2 hypothetical protein (NCBI ptt file) compare
BT1952 -1.2 -3.9 Fe3+ ABC transporter, periplasmic iron-binding protein (NCBI ptt file) compare
BT2945 -1.2 -3.8 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) compare
BT4192 -1.2 -3.1 lipoic acid synthetase (NCBI ptt file) compare
BT3973 -1.2 -1.8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) compare
BT3371 -1.2 -1.2 putative glycosyltransferase yibD (NCBI ptt file) compare
BT1948 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT3072 -1.2 -0.8 collagenase precursor (NCBI ptt file) compare
BT4614 -1.2 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1954 -1.2 -2.0 putative surface layer protein (NCBI ptt file) compare
BT0832 -1.2 -6.0 putative phosphoserine phosphatase (NCBI ptt file) compare
BT3075 -1.2 -6.1 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT3336 -1.2 -3.0 UDP-N-acetylglucosamine acetyltransferase (NCBI ptt file) compare
BT2206 -1.2 -2.8 Zinc ABC transporter, permease (NCBI ptt file) compare
BT4322 -1.2 -0.8 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT0547 -1.2 -0.8 aspartate aminotransferase (NCBI ptt file) compare
BT1202 -1.2 -1.1 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT3440 -1.2 -4.7 hypothetical protein (NCBI ptt file) compare
BT1482 -1.2 -2.0 two-component system response regulator (NCBI ptt file) compare
BT3727 -1.2 -2.3 hypothetical protein (NCBI ptt file) compare
BT1706 -1.2 -2.9 putative N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT3248 -1.2 -5.2 putative metal ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT2742 -1.2 -0.5 integrase, site-specific recombinase (NCBI ptt file) compare
BT4349 -1.2 -1.7 hypothetical protein (NCBI ptt file) compare
BT4478 -1.2 -1.7 hypothetical protein (NCBI ptt file) compare
BT3694 -1.1 -1.0 glycosyltransferase (NCBI ptt file) compare
BT0411 -1.1 -1.3 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT2637 -1.1 -2.5 hypothetical protein (NCBI ptt file) compare
BT3194 -1.1 -2.5 hypothetical protein (NCBI ptt file) compare
BT4068 -1.1 -2.5 hypothetical protein (NCBI ptt file) compare
BT3224 -1.1 -2.1 putative lysine decarboxylase (NCBI ptt file) compare
BT3903 -1.1 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0811 -1.1 -1.3 putative tRNA/rRNA methyltransferase (NCBI ptt file) compare
BT2042 -1.1 -0.7 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT0336 -1.1 -3.8 conserved hypothetical protein (NCBI ptt file) compare
BT1354 -1.1 -1.8 putative flippase (NCBI ptt file) compare
BT0255 -1.1 -1.4 hypothetical protein (NCBI ptt file) compare
BT4778 -1.1 -1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3373 -1.1 -2.0 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT0367 -1.1 -3.3 putative endo-arabinase (NCBI ptt file) compare


Specific Phenotypes

For 5 genes in this experiment

For mouse; methotrexate Methotrexate in Bacteroides thetaiotaomicron VPI-5482

For mouse; methotrexate Methotrexate across organisms