Experiment set36S464 for Bacteroides thetaiotaomicron VPI-5482
Stool_Day7_Mouse8
Group: mouse; methotrexateMedia: + Methotrexate (5 mg/kg)
Culturing: Btheta_ML6a
By: Nayak-UCSF-RBAD on 10/31/24
Specific Phenotypes
For 6 genes in this experiment
For mouse; methotrexate Methotrexate in Bacteroides thetaiotaomicron VPI-5482
For mouse; methotrexate Methotrexate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Multidrug Resistance Efflux Pumps | 3 |
| Multidrug efflux pump in Campylobacter jejuni (CmeABC operon) | 3 |
| Respiratory Complex I | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| NADH to cytochrome bd oxidase electron transfer I | 2 | 1 | 1 |
| NADH to cytochrome bo oxidase electron transfer I | 2 | 1 | 1 |
| aerobic respiration III (alternative oxidase pathway) | 3 | 2 | 1 |
| aerobic respiration I (cytochrome c) | 4 | 2 | 1 |
| NAD(P)/NADPH interconversion | 6 | 2 | 1 |
| Fe(II) oxidation | 6 | 1 | 1 |