Experiment set36S451 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Stool_Day6_Mouse17

200 most important genes:

  gene name fitness t score description  
p5482_02 -4.4 -3.0 hypothetical protein (NCBI) compare
BT1757 -4.3 -3.0 fructokinase (NCBI ptt file) compare
BT3733 -3.7 -5.1 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT3554 -3.2 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3933 -3.1 -3.0 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT3320 -3.1 -2.1 dihydrodipicolinate reductase (NCBI ptt file) compare
BT3688 -3.0 -6.1 putative acetyltransferase (NCBI ptt file) compare
BT1843 -2.9 -2.0 adenylosuccinate synthetase (NCBI ptt file) compare
BT1607 -2.9 -2.0 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3821 -2.9 -6.9 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT2417 -2.8 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2415 -2.6 -3.6 aspartate aminotransferase (NCBI ptt file) compare
BT1844 -2.6 -1.8 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT1355 -2.6 -4.0 hypothetical protein (NCBI ptt file) compare
BT0892 -2.5 -1.7 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT1374 -2.5 -1.7 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT4174 -2.5 -3.4 conserved hypothetical protein (NCBI ptt file) compare
BT2236 -2.5 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4304 -2.5 -10.8 putative glycosyltransferase (NCBI ptt file) compare
BT2787 -2.4 -13.1 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) compare
BT2798 -2.4 -10.2 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT0180 -2.4 -4.3 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT0700 -2.4 -1.7 GTP pyrophosphokinase (NCBI ptt file) compare
BT3936 -2.4 -1.6 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT4329 -2.3 -3.8 conserved hypothetical protein with a conserved domain (NCBI ptt file) compare
BT1758 -2.3 -1.6 fructose transporter (from data) compare
BT2403 -2.3 -6.3 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT0146 -2.3 -5.3 unsaturated glucuronyl hydrolase (NCBI ptt file) compare
BT4061 -2.2 -2.6 NADH dehydrogenase I, chain K (NCBI ptt file) compare
BT3442 -2.2 -15.6 conserved hypothetical protein (NCBI ptt file) compare
BT1375 -2.2 -1.5 aspartokinase (NCBI ptt file) compare
BT4191 -2.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT2167 -2.2 -6.7 elongation factor G (NCBI ptt file) compare
BT0156 -2.2 -2.1 transcriptional regulator (NCBI ptt file) compare
BT2074 -2.2 -6.6 ketol-acid reductoisomerase (NCBI ptt file) compare
BT2843 -2.2 -1.5 integrase (NCBI ptt file) compare
BT1957 -2.1 -6.5 hypothetical protein (NCBI ptt file) compare
BT3248 -2.1 -9.2 putative metal ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT0555 -2.1 -2.1 amidophosphoribosyltransferase (NCBI ptt file) compare
BT4303 -2.1 -10.6 glycogen debranching enzyme-related protein (4-alpha-glucanotransferase) (NCBI ptt file) compare
BT4043 -2.1 -5.7 dimethyladenosine transferase (NCBI ptt file) compare
BT0697 -2.1 -1.4 putative phosphatase/phosphohexomutase (NCBI ptt file) compare
BT4195 -2.1 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3337 -2.0 -7.1 RND efflux system, outer membrane component BipA (from data) compare
BT0350 -2.0 -1.4 ribulokinase (EC 2.7.1.16) (from data) compare
BT2170 -2.0 -4.8 hypothetical protein (NCBI ptt file) compare
BT1270 -2.0 -2.7 putative Na+/H+ antiporter (NCBI ptt file) compare
BT_2008 -1.9 -1.2 hypothetical protein (RefSeq) compare
BT0556 -1.9 -1.3 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT1340 -1.9 -2.3 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT3253 -1.9 -1.3 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0875 -1.9 -3.4 beta-ureidopropionase (NCBI ptt file) compare
BT2206 -1.9 -3.6 Zinc ABC transporter, permease (NCBI ptt file) compare
BT0155 -1.9 -5.5 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT1347 -1.9 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT3249 -1.9 -4.9 putative zinc ABC transporter, zinc-binding protein (NCBI ptt file) compare
BT0405 -1.8 -1.7 hypothetical protein (NCBI ptt file) compare
BT0557 -1.8 -4.2 carbamyl phosphate synthetase (NCBI ptt file) compare
BT4305 -1.8 -8.5 putative alpha-amylase (NCBI ptt file) compare
BT4720 -1.8 -2.5 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4416 -1.8 -2.1 Cu2+ homeostasis protein CutC (NCBI ptt file) compare
BT0258 -1.8 -5.2 glucosamine-6-phosphate isomerase (NCBI ptt file) compare
BT2153 -1.8 -1.2 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT3439 -1.8 -8.8 hypothetical protein (NCBI ptt file) compare
BT1352 -1.8 -3.1 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT1361 -1.8 -3.3 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT4556 -1.8 -1.7 hypothetical protein (NCBI ptt file) compare
BT1222 -1.7 -1.2 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT4610 -1.7 -1.2 RecA (NCBI ptt file) compare
BT1536 -1.7 -2.0 ABC transporter permease (NCBI ptt file) compare
BT1081 -1.7 -1.2 recombination protein recR (NCBI ptt file) compare
BT3981 -1.7 -1.2 hypothetical protein (NCBI ptt file) compare
BT1684 -1.7 -3.4 conserved hypothetical protein (NCBI ptt file) compare
BT3373 -1.7 -2.5 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT0376 -1.7 -1.6 putative transcriptional regulator (NCBI ptt file) compare
BT0831 -1.7 -6.8 ATP-dependent RNA helicase (NCBI ptt file) compare
BT1343 -1.7 -2.0 putative capsule biosynthesis protein (NCBI ptt file) compare
BT2766 -1.7 -3.3 hypothetical protein (NCBI ptt file) compare
BT2088 -1.7 -1.9 hypothetical protein (NCBI ptt file) compare
BT0638 -1.7 -3.4 putative methionine aminopeptidase A (NCBI ptt file) compare
BT1955 -1.6 -4.6 putative cell wall biogenesis protein (NCBI ptt file) compare
BT2262 -1.6 -5.7 hypothetical protein (NCBI ptt file) compare
BT3462 -1.6 -1.6 TPR domain protein (NCBI ptt file) compare
BT1145 -1.6 -1.1 glucose-inhibited division protein (NCBI ptt file) compare
BT0353 -1.6 -3.9 putative sugar epimerase/aldolase (NCBI ptt file) compare
BT0548 -1.6 -1.1 diaminopimelate epimerase (NCBI ptt file) compare
BT1515 -1.6 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT3371 -1.6 -1.1 putative glycosyltransferase yibD (NCBI ptt file) compare
BT_t17 pseudo-tRNA -1.6 -1.8 tRNA-OTHER (RefSeq) compare
BT3717 -1.6 -2.2 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT1354 -1.6 -1.1 putative flippase (NCBI ptt file) compare
BT1232 -1.6 -1.5 hypothetical protein (NCBI ptt file) compare
BT4049 -1.6 -3.4 putative ArgK protein with ATPase and kinase domains (NCBI ptt file) compare
BT0526 -1.6 -3.7 L-asparaginase I (NCBI ptt file) compare
BT4086 -1.6 -2.1 hypothetical protein (NCBI ptt file) compare
BT3920 -1.6 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT3902 -1.6 -3.9 conserved hypothetical protein (NCBI ptt file) compare
BT0811 -1.6 -2.1 putative tRNA/rRNA methyltransferase (NCBI ptt file) compare
BT0547 -1.6 -1.1 aspartate aminotransferase (NCBI ptt file) compare
BT1956 -1.6 -2.1 putative cell surface protein (NCBI ptt file) compare
BT0503 -1.6 -1.5 hypothetical protein (NCBI ptt file) compare
BT1068 -1.5 -2.3 hypothetical protein (NCBI ptt file) compare
BT2449 -1.5 -1.8 hypothetical protein (NCBI ptt file) compare
BT4644 -1.5 -1.5 putative anti-sigma factor (NCBI ptt file) compare
BT2413 -1.5 -5.3 homoserine O-succinyltransferase (NCBI ptt file) compare
BT3193 -1.5 -8.6 putative coenzyme A transferase (NCBI ptt file) compare
BT1859 -1.5 -2.5 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT4041 -1.5 -3.4 conserved hypothetical protein (NCBI ptt file) compare
BT4059 -1.5 -8.4 NADH dehydrogenase I, chain M (NCBI ptt file) compare
BT4768 -1.5 -2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2173 -1.5 -3.9 hypothetical protein (NCBI ptt file) compare
BT4322 -1.5 -1.0 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT4764 -1.5 -1.5 hypothetical protein (NCBI ptt file) compare
BT2386 -1.5 -5.1 AsnC family transcriptional regulator (NCBI ptt file) compare
BT0223 -1.5 -2.1 two-component system response regulator (NCBI ptt file) compare
BT3550 -1.5 -2.0 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT0972 -1.5 -1.7 putative oxidoreductase (NCBI ptt file) compare
BT2145 -1.5 -4.4 ribonucleoside-diphosphate reductase alpha chain (NCBI ptt file) compare
BT3197 -1.5 -0.9 hypothetical protein (NCBI ptt file) compare
BT4452 -1.4 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4219 -1.4 -2.8 hypothetical protein (NCBI ptt file) compare
BT0067 -1.4 -1.6 hypothetical protein (NCBI ptt file) compare
BT3926 -1.4 -1.7 putative peptidase (NCBI ptt file) compare
BT2157 -1.4 -2.1 3-keto-alpha-glucoside 1,2-lyase; 3-ketoglucose dehydratase (from data) compare
BT2300 -1.4 -2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2264 -1.4 -9.5 outer membrane protein Omp121 (NCBI ptt file) compare
BT4649 -1.4 -0.9 hypothetical protein (NCBI ptt file) compare
BT4614 -1.4 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1350 -1.4 -2.5 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT1747 -1.4 -1.0 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT3072 -1.4 -1.3 collagenase precursor (NCBI ptt file) compare
BT3904 -1.4 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1860 -1.4 -3.0 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT1339 -1.4 -3.0 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT1954 -1.4 -2.0 putative surface layer protein (NCBI ptt file) compare
BT1953 -1.4 -3.9 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT0378 -1.3 -1.3 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT2263 -1.3 -6.5 hypothetical protein (NCBI ptt file) compare
BT3819 -1.3 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0561 -1.3 -2.5 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0100 -1.3 -1.9 hypothetical protein (NCBI ptt file) compare
BT3414 -1.3 -5.3 Mg2+/Co2+ transporter (NCBI ptt file) compare
BT1342 -1.3 -1.8 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT3138 -1.3 -8.2 hypothetical protein (NCBI ptt file) compare
BT4379 -1.3 -4.9 putative oxalate:formate antiporter (NCBI ptt file) compare
BT4060 -1.3 -8.7 NADH dehydrogenase I, chain L (NCBI ptt file) compare
BT4067 -1.3 -3.6 NADH dehydrogenase I, chain A (NCBI ptt file) compare
BT4766 -1.3 -2.7 hypothetical protein (NCBI ptt file) compare
BT4151 -1.3 -7.1 beta-glucuronidase (NCBI ptt file) compare
BT0596 -1.3 -0.9 putative transcriptional regulator (NCBI ptt file) compare
BT0637 -1.3 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1346 -1.3 -0.9 capsule biosynthesis protein capA (NCBI ptt file) compare
BT2742 -1.3 -0.7 integrase, site-specific recombinase (NCBI ptt file) compare
BT2633 -1.3 -2.7 hypothetical protein (NCBI ptt file) compare
BT2604 -1.3 -2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4193 -1.3 -3.3 dipeptidyl peptidase IV (NCBI ptt file) compare
BT4066 -1.3 -5.5 NADH dehydrogenase I, chain B (NCBI ptt file) compare
BT1348 -1.3 -1.5 CDP-abequose synthase (NCBI ptt file) compare
BT3903 -1.3 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT0351 -1.2 -1.9 L-arabinose isomerase (NCBI ptt file) compare
BT0372 -1.2 -2.0 aldose 1-epimerase precursor (NCBI ptt file) compare
BT4300 -1.2 -0.8 transcription regulator, CRP family (NCBI ptt file) compare
BT2261 -1.2 -5.7 hypothetical protein (NCBI ptt file) compare
BT4208 -1.2 -5.8 phosphohydrolase (NCBI ptt file) compare
BT0370 -1.2 -2.3 galactokinase (NCBI ptt file) compare
BT0256 -1.2 -2.2 hypothetical protein (NCBI ptt file) compare
BT4400 -1.2 -1.4 hypothetical protein (NCBI ptt file) compare
BT0035 -1.2 -1.2 hypothetical protein (NCBI ptt file) compare
BT4776 -1.2 -2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1356 -1.2 -1.1 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT2283 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT4599 -1.1 -2.9 putative transcriptional regulator (NCBI ptt file) compare
BT0063 -1.1 -1.5 hypothetical protein (NCBI ptt file) compare
BT3727 -1.1 -2.7 hypothetical protein (NCBI ptt file) compare
BT0473 -1.1 -1.7 putative glycosyltransferase (NCBI ptt file) compare
BT2050 -1.1 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT1564 -1.1 -0.8 conserved hypothetical protein (NCBI ptt file) compare
BT1173 -1.1 -1.1 hypothetical protein (NCBI ptt file) compare
BT0891 -1.1 -0.8 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT2977 -1.1 -5.3 peptidylprolyl isomerase (NCBI ptt file) compare
BT1928 -1.1 -2.6 transposase (NCBI ptt file) compare
BT1558 -1.1 -2.2 hypothetical protein (NCBI ptt file) compare
BT3935 -1.1 -1.1 aminotransferase (NCBI ptt file) compare
BT1175 -1.1 -2.7 hypothetical protein (NCBI ptt file) compare
BT2938 -1.1 -2.3 putative glycosyltransferase (NCBI ptt file) compare
BT1221 -1.1 -0.8 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT4697 -1.1 -5.7 transcriptional regulator (NCBI ptt file) compare
BT0352 -1.1 -0.7 conserved hypothetical protein (NCBI ptt file) compare
BT3427 -1.1 -4.2 conserved hypothetical protein (NCBI ptt file) compare
BT3440 -1.1 -4.8 hypothetical protein (NCBI ptt file) compare
BT1530 -1.1 -1.5 putative outer membrane protein OprM precursor (NCBI ptt file) compare
BT4063 -1.1 -1.3 NADH dehydrogenase I, chain I (NCBI ptt file) compare
BT3812 -1.1 -1.9 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT0728 -1.1 -1.5 transcriptional regulator (NCBI ptt file) compare
BT1557 -1.1 -1.0 hypothetical protein (NCBI ptt file) compare
BT1516 -1.1 -1.4 replicative DNA helicase (NCBI ptt file) compare
BT0917 -1.1 -2.1 competence-damage inducible protein (NCBI ptt file) compare
BT4020 -1.1 -4.3 conserved hypothetical protein (NCBI ptt file) compare
BT4062 -1.1 -2.3 NADH dehydrogenase I, chain J (NCBI ptt file) compare
BT1809 -1.1 -7.0 conserved protein, with weak BamHI domain (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse; zymosan and methotrexate experiments

For mouse; zymosan and methotrexate Methotrexate across organisms