Experiment set36S337 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Stool_Day2_Mouse1

200 most important genes:

  gene name fitness t score description  
BT3933 -3.6 -2.5 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1843 -3.3 -2.3 adenylosuccinate synthetase (NCBI ptt file) compare
BT3320 -3.0 -4.9 dihydrodipicolinate reductase (NCBI ptt file) compare
BT1607 -2.9 -3.5 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1374 -2.8 -2.0 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT0892 -2.7 -1.8 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3733 -2.6 -11.3 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT1757 -2.6 -5.9 fructokinase (NCBI ptt file) compare
BT0555 -2.5 -1.7 amidophosphoribosyltransferase (NCBI ptt file) compare
BT3936 -2.5 -2.4 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT1375 -2.5 -3.4 aspartokinase (NCBI ptt file) compare
BT2415 -2.5 -8.7 aspartate aminotransferase (NCBI ptt file) compare
BT3253 -2.4 -1.7 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT4191 -2.4 -4.8 hypothetical protein (NCBI ptt file) compare
BT_2008 -2.3 -1.6 hypothetical protein (RefSeq) compare
BT0155 -2.3 -6.4 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT2003 -2.3 -1.5 putative membrane peptidase (NCBI ptt file) compare
BT3902 -2.2 -4.7 conserved hypothetical protein (NCBI ptt file) compare
BT0556 -2.2 -1.5 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT2153 -2.2 -1.5 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT0557 -2.2 -4.6 carbamyl phosphate synthetase (NCBI ptt file) compare
BT0185 -2.1 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4599 -2.1 -4.4 putative transcriptional regulator (NCBI ptt file) compare
BT1641 -2.1 -2.0 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1270 -2.1 -3.7 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1222 -2.1 -1.4 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT1844 -2.0 -3.3 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT2843 -2.0 -2.3 integrase (NCBI ptt file) compare
BT3903 -1.9 -3.2 conserved hypothetical protein (NCBI ptt file) compare
p5482_02 -1.9 -5.6 hypothetical protein (NCBI) compare
BT0548 -1.9 -1.3 diaminopimelate epimerase (NCBI ptt file) compare
BT1741 -1.9 -2.2 hypothetical protein (NCBI ptt file) compare
BT1355 -1.9 -6.5 hypothetical protein (NCBI ptt file) compare
BT1343 -1.9 -2.6 putative capsule biosynthesis protein (NCBI ptt file) compare
BT1347 -1.9 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT3414 -1.9 -7.1 Mg2+/Co2+ transporter (NCBI ptt file) compare
BT4195 -1.8 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT3981 -1.8 -2.1 hypothetical protein (NCBI ptt file) compare
BT1352 -1.8 -3.4 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT3688 -1.8 -6.8 putative acetyltransferase (NCBI ptt file) compare
BT1340 -1.7 -3.4 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT1747 -1.7 -2.0 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT3717 -1.7 -3.7 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0972 -1.6 -1.9 putative oxidoreductase (NCBI ptt file) compare
BT0547 -1.6 -1.9 aspartate aminotransferase (NCBI ptt file) compare
BT2283 -1.6 -1.8 hypothetical protein (NCBI ptt file) compare
BT0546 -1.6 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2417 -1.6 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1137 -1.6 -1.6 hypothetical protein (NCBI ptt file) compare
BT1758 -1.6 -2.5 fructose transporter (from data) compare
BT0526 -1.6 -3.8 L-asparaginase I (NCBI ptt file) compare
BT2742 -1.5 -1.0 integrase, site-specific recombinase (NCBI ptt file) compare
BT1536 -1.5 -2.5 ABC transporter permease (NCBI ptt file) compare
BT1859 -1.5 -3.1 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT1354 -1.5 -3.0 putative flippase (NCBI ptt file) compare
BT0074 -1.4 -2.1 hypothetical protein (NCBI ptt file) compare
BT4211 -1.4 -1.0 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT4644 -1.4 -2.1 putative anti-sigma factor (NCBI ptt file) compare
BT1173 -1.4 -1.3 hypothetical protein (NCBI ptt file) compare
BT3759 -1.4 -6.7 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT2932 -1.4 -1.3 transcriptional regulator (NCBI ptt file) compare
BT3712 -1.4 -2.0 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT0554 -1.4 -2.0 glucosamine--fructose-6-phosphate aminotransferase (NCBI ptt file) compare
BT3549 -1.4 -5.0 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT4774 -1.4 -1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0925 -1.4 -1.5 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT1341 -1.3 -1.6 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT3371 -1.3 -1.8 putative glycosyltransferase yibD (NCBI ptt file) compare
BT2938 -1.3 -3.0 putative glycosyltransferase (NCBI ptt file) compare
BT0891 -1.3 -0.9 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT0156 -1.3 -1.9 transcriptional regulator (NCBI ptt file) compare
BT0544 -1.3 -1.9 ammonium transporter (NCBI ptt file) compare
BT1221 -1.3 -1.2 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT0923 -1.3 -1.6 putative periplasmic protein (NCBI ptt file) compare
BT0954 -1.3 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0581 -1.3 -1.2 putative acetyltransferase, GNAT family (NCBI ptt file) compare
BT3904 -1.3 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT3462 -1.3 -2.3 TPR domain protein (NCBI ptt file) compare
BT1444 -1.3 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0180 -1.2 -5.5 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT3821 -1.2 -6.1 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT3072 -1.2 -3.3 collagenase precursor (NCBI ptt file) compare
BT0592 -1.2 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT3197 -1.2 -1.1 hypothetical protein (NCBI ptt file) compare
BT1339 -1.2 -3.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT0543 -1.2 -1.8 glutamine synthetase (NCBI ptt file) compare
BT4416 -1.2 -2.4 Cu2+ homeostasis protein CutC (NCBI ptt file) compare
BT1346 -1.2 -2.1 capsule biosynthesis protein capA (NCBI ptt file) compare
BT1342 -1.2 -3.1 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT1733 -1.2 -0.8 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT0635 -1.2 -1.1 putative transcriptional regulator (NCBI ptt file) compare
BT0443 -1.2 -1.3 thermostable beta-glucosidase B (NCBI ptt file) compare
BT2049 -1.2 -1.1 transcriptional regulator (NCBI ptt file) compare
BT4300 -1.2 -1.7 transcription regulator, CRP family (NCBI ptt file) compare
BT1759 -1.2 -1.7 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT0013 -1.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT4735 -1.2 -2.5 hypothetical protein (NCBI ptt file) compare
BT0429 -1.2 -1.3 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT0223 -1.2 -2.0 two-component system response regulator (NCBI ptt file) compare
BT0847 -1.1 -1.8 hypothetical protein (NCBI ptt file) compare
BT2122 -1.1 -1.0 lysyl-tRNA synthetase (NCBI ptt file) compare
BT1348 -1.1 -2.4 CDP-abequose synthase (NCBI ptt file) compare
BT1211 -1.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT2467 -1.1 -2.7 hypothetical protein (NCBI ptt file) compare
BT1214 -1.1 -2.0 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0561 -1.1 -2.5 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT3905 -1.1 -1.3 putative alkaline protease aprF (NCBI ptt file) compare
BT4610 -1.1 -1.2 RecA (NCBI ptt file) compare
BT3550 -1.1 -2.6 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT2787 -1.1 -7.7 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) compare
BT1351 -1.1 -1.3 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT4478 -1.1 -2.1 hypothetical protein (NCBI ptt file) compare
BT1860 -1.1 -3.0 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT0115 -1.1 -2.1 arsenate reductase (NCBI ptt file) compare
BT2646 -1.1 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT1857 -1.1 -4.7 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT2169 -1.1 -2.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3935 -1.1 -2.1 aminotransferase (NCBI ptt file) compare
BT2281 -1.1 -0.7 hypothetical protein (NCBI ptt file) compare
BT0472 -1.1 -1.8 putative acyltransferase in colanic acid biosynthesis (NCBI ptt file) compare
BT1350 -1.1 -2.8 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT0197 -1.1 -2.5 hypothetical protein (NCBI ptt file) compare
BT3348 -1.1 -4.0 unsaturated glucuronide lyase acting on chondroitin/heparin disaccharides (EC 3.2.1.180) (from data) compare
BT1868 -1.1 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT0044 -1.1 -1.2 putative glycosyltransferase (NCBI ptt file) compare
BT4778 -1.1 -1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2185 -1.1 -2.3 hypothetical protein (NCBI ptt file) compare
BT1329 -1.1 -1.7 putative thiol peroxidase (NCBI ptt file) compare
BT0875 -1.1 -2.7 beta-ureidopropionase (NCBI ptt file) compare
BT2170 -1.1 -3.7 hypothetical protein (NCBI ptt file) compare
BT4766 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT0838 -1.0 -1.7 putative RNA methyltransferase (NCBI ptt file) compare
BT1169 -1.0 -1.3 hypothetical protein (NCBI ptt file) compare
BT4649 -1.0 -1.0 hypothetical protein (NCBI ptt file) compare
BT4098 -1.0 -0.7 Trk system K+ uptake protein trkA (NCBI ptt file) compare
BT0376 -1.0 -1.3 putative transcriptional regulator (NCBI ptt file) compare
BT1356 -1.0 -2.0 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT1353 -1.0 -1.0 glycosyltransferase (NCBI ptt file) compare
BT3805 -1.0 -1.6 two-component system sensor histidine kinase (NCBI ptt file) compare
BT4551 -1.0 -0.7 putative GTPase, ThdF family (NCBI ptt file) compare
BT4174 -1.0 -3.6 conserved hypothetical protein (NCBI ptt file) compare
BT1680 -1.0 -1.6 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT1345 -1.0 -1.9 glycosyltransferase (NCBI ptt file) compare
BT4466 -1.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT0771 -1.0 -1.2 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT1115 -1.0 -2.1 aldo/keto reductase (NCBI ptt file) compare
BT3783 -1.0 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0553 -1.0 -6.0 glutamate synthase, large subunit (NCBI ptt file) compare
BT4043 -1.0 -4.5 dimethyladenosine transferase (NCBI ptt file) compare
BT4237 -1.0 -2.5 tRNA pseudouridine synthase A (NCBI ptt file) compare
BT0321 -1.0 -1.2 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT4317 -1.0 -1.5 putative lipoprotein protein (NCBI ptt file) compare
BT0087 -1.0 -1.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0542 -1.0 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT4264 -1.0 -4.3 putative ion channel (NCBI ptt file) compare
BT4720 -1.0 -2.3 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1220 -1.0 -0.6 6-phosphogluconolactonase (NCBI ptt file) compare
BT0146 -0.9 -4.3 unsaturated glucuronyl hydrolase (NCBI ptt file) compare
BT1956 -0.9 -2.8 putative cell surface protein (NCBI ptt file) compare
BT3232 -0.9 -1.0 gluconate 5-dehydrogenase (NCBI ptt file) compare
BT2173 -0.9 -3.6 hypothetical protein (NCBI ptt file) compare
BT0782 -0.9 -1.0 hypothetical protein (NCBI ptt file) compare
BT0922 -0.9 -1.5 hypothetical protein (NCBI ptt file) compare
BT0788 -0.9 -2.4 succinyl-CoA synthetase beta chain (NCBI ptt file) compare
BT3694 -0.9 -1.3 glycosyltransferase (NCBI ptt file) compare
BT0585 -0.9 -0.8 conserved hypothetical protein (NCBI ptt file) compare
BT3758 -0.9 -2.3 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT0700 -0.9 -2.6 GTP pyrophosphokinase (NCBI ptt file) compare
BT3760 -0.9 -3.2 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT4027 -0.9 -1.1 hypothetical protein (NCBI ptt file) compare
BT1954 -0.9 -2.2 putative surface layer protein (NCBI ptt file) compare
BT1358 -0.9 -1.5 putative transcriptional regulator (NCBI ptt file) compare
BT0869 -0.9 -0.8 hypothetical protein (NCBI ptt file) compare
BT0519 -0.9 -3.1 hypothetical protein (NCBI ptt file) compare
BT0596 -0.9 -0.8 putative transcriptional regulator (NCBI ptt file) compare
BT4372 -0.9 -4.0 conserved hypothetical protein (NCBI ptt file) compare
BT3911 -0.9 -1.4 malate dehydrogenase (NCBI ptt file) compare
BT1854 -0.9 -0.6 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT4103 -0.9 -1.0 putative Sec-independent protein translocase (NCBI ptt file) compare
BT4032 -0.9 -2.1 conserved hypothetical protein, putative non-specific DNA-binding protein (NCBI ptt file) compare
BT3554 -0.9 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0794 -0.9 -2.1 D-xylose-proton symporter (D-xylose transporter) (NCBI ptt file) compare
BT3260 -0.9 -1.4 DNA polymerase I (NCBI ptt file) compare
BT2103 -0.9 -1.8 transcriptional regulator (NCBI ptt file) compare
BT2042 -0.9 -1.1 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT0786 -0.9 -2.0 putative integral membrane protein (NCBI ptt file) compare
BT0529 -0.9 -1.3 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT4668 -0.8 -1.7 arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) compare
BT2798 -0.8 -6.1 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT4003 -0.8 -1.6 stationary-phase survival protein SurE (NCBI ptt file) compare
BT_0823 -0.8 -2.5 glucuronate isomerase (RefSeq) compare
BT0927 -0.8 -0.5 two-component system sensor histidine kinase (NCBI ptt file) compare
BT2413 -0.8 -4.5 homoserine O-succinyltransferase (NCBI ptt file) compare
BT0860 -0.8 -1.0 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0638 -0.8 -2.5 putative methionine aminopeptidase A (NCBI ptt file) compare
BT1304 -0.8 -0.7 putative transcriptional regulator (NCBI ptt file) compare
BT1379 -0.8 -2.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT1069 -0.8 -0.8 conserved hypothetical protein, putative transcriptional regulator (NCBI ptt file) compare
BT0080 -0.8 -1.6 hypothetical protein (NCBI ptt file) compare
BT2944 -0.8 -2.7 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse; vehicle experiments