Experiment set36S331 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Stool_Day1_Mouse17

200 most important genes:

  gene name fitness t score description  
BT1746 -3.6 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1843 -3.2 -3.1 adenylosuccinate synthetase (NCBI ptt file) compare
BT1607 -3.0 -2.9 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3320 -3.0 -4.9 dihydrodipicolinate reductase (NCBI ptt file) compare
BT1374 -2.8 -1.9 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT3933 -2.5 -6.0 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT3253 -2.5 -1.7 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT3936 -2.4 -2.3 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT1375 -2.3 -4.6 aspartokinase (NCBI ptt file) compare
BT2003 -2.2 -1.5 putative membrane peptidase (NCBI ptt file) compare
BT0972 -2.2 -2.1 putative oxidoreductase (NCBI ptt file) compare
BT0652 -2.1 -1.9 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
p5482_02 -2.0 -5.8 hypothetical protein (NCBI) compare
BT2843 -2.0 -2.4 integrase (NCBI ptt file) compare
BT1641 -2.0 -1.8 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1222 -2.0 -1.3 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT1667 -2.0 -1.3 hypothetical protein (NCBI ptt file) compare
BT3733 -1.9 -10.3 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT0892 -1.9 -1.7 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT1844 -1.9 -3.3 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT2932 -1.9 -1.3 transcriptional regulator (NCBI ptt file) compare
BT1340 -1.8 -3.9 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT2283 -1.8 -1.7 hypothetical protein (NCBI ptt file) compare
BT3195 -1.8 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT0556 -1.8 -2.1 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT3903 -1.7 -3.8 conserved hypothetical protein (NCBI ptt file) compare
BT0156 -1.7 -1.9 transcriptional regulator (NCBI ptt file) compare
BT0155 -1.6 -5.1 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT3902 -1.6 -4.7 conserved hypothetical protein (NCBI ptt file) compare
BT0917 -1.6 -2.5 competence-damage inducible protein (NCBI ptt file) compare
BT4061 -1.5 -2.3 NADH dehydrogenase I, chain K (NCBI ptt file) compare
BT3717 -1.5 -3.7 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT2074 -1.5 -7.3 ketol-acid reductoisomerase (NCBI ptt file) compare
BT2153 -1.5 -1.4 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT2417 -1.5 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0405 -1.5 -1.6 hypothetical protein (NCBI ptt file) compare
BT4271 -1.4 -2.1 hypothetical protein (NCBI ptt file) compare
BT4328 -1.4 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT3911 -1.4 -1.3 malate dehydrogenase (NCBI ptt file) compare
BT3337 -1.4 -7.2 RND efflux system, outer membrane component BipA (from data) compare
BT3688 -1.4 -6.0 putative acetyltransferase (NCBI ptt file) compare
BT3904 -1.4 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT3414 -1.4 -6.4 Mg2+/Co2+ transporter (NCBI ptt file) compare
BT1347 -1.4 -3.5 conserved hypothetical protein (NCBI ptt file) compare
BT0555 -1.3 -3.8 amidophosphoribosyltransferase (NCBI ptt file) compare
BT0548 -1.3 -1.5 diaminopimelate epimerase (NCBI ptt file) compare
BT1369 -1.3 -1.5 hypothetical protein (NCBI ptt file) compare
BT0557 -1.3 -4.5 carbamyl phosphate synthetase (NCBI ptt file) compare
BT1270 -1.3 -3.8 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1758 -1.3 -2.2 fructose transporter (from data) compare
BT0771 -1.3 -0.9 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT1339 -1.3 -4.1 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT0527 -1.3 -3.2 tryptophan synthase alpha chain (NCBI ptt file) compare
BT4644 -1.3 -1.7 putative anti-sigma factor (NCBI ptt file) compare
BT3882 -1.3 -1.2 putative DNA binding protein (NCBI ptt file) compare
BT0758 -1.3 -1.7 acetyltransferase (NCBI ptt file) compare
BT3981 -1.3 -2.0 hypothetical protein (NCBI ptt file) compare
BT1127 -1.3 -1.4 mobilization protein BmgB (NCBI ptt file) compare
BT1304 -1.3 -0.8 putative transcriptional regulator (NCBI ptt file) compare
BT1342 -1.3 -2.9 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT2142 -1.3 -1.1 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT0085 -1.2 -2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0922 -1.2 -2.1 hypothetical protein (NCBI ptt file) compare
BT0013 -1.2 -1.6 hypothetical protein (NCBI ptt file) compare
BT4610 -1.2 -1.4 RecA (NCBI ptt file) compare
BT1153 -1.2 -4.1 phosphoserine aminotransferase (NCBI ptt file) compare
BT2938 -1.2 -3.2 putative glycosyltransferase (NCBI ptt file) compare
BT1747 -1.2 -2.1 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT1954 -1.2 -2.7 putative surface layer protein (NCBI ptt file) compare
BT3783 -1.2 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1680 -1.2 -1.8 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT0902 -1.2 -1.6 hypothetical protein (NCBI ptt file) compare
BT2173 -1.2 -4.1 hypothetical protein (NCBI ptt file) compare
BT4599 -1.2 -3.5 putative transcriptional regulator (NCBI ptt file) compare
BT_2008 -1.2 -1.3 hypothetical protein (RefSeq) compare
BT1990 -1.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT1213 -1.2 -1.9 periplasmic component of efflux system (NCBI ptt file) compare
BT1476 -1.2 -2.4 aspartate aminotransferase (NCBI ptt file) compare
BT1358 -1.2 -1.4 putative transcriptional regulator (NCBI ptt file) compare
BT4778 -1.2 -2.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0547 -1.2 -2.8 aspartate aminotransferase (NCBI ptt file) compare
BT1427 -1.2 -2.3 tetracycline resistance element mobilization regulatory protein rteC (NCBI ptt file) compare
BT4211 -1.2 -1.1 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT4255 -1.2 -2.0 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) compare
BT1343 -1.2 -2.9 putative capsule biosynthesis protein (NCBI ptt file) compare
BT3395 -1.1 -5.2 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT3760 -1.1 -3.6 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT0875 -1.1 -2.8 beta-ureidopropionase (NCBI ptt file) compare
BT4649 -1.1 -1.0 hypothetical protein (NCBI ptt file) compare
BT2075 -1.1 -4.6 acyl-ACP thioesterase (NCBI ptt file) compare
BT0443 -1.1 -1.3 thermostable beta-glucosidase B (NCBI ptt file) compare
BT3912 -1.1 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3821 -1.1 -6.3 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT1757 -1.1 -3.9 fructokinase (NCBI ptt file) compare
BT1350 -1.1 -2.8 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT4322 -1.1 -1.3 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT0700 -1.1 -3.0 GTP pyrophosphokinase (NCBI ptt file) compare
BT3339 -1.1 -5.3 RND efflux system, membrane fusion component BipC (from data) compare
BT1115 -1.1 -2.1 aldo/keto reductase (NCBI ptt file) compare
BT0258 -1.1 -5.0 glucosamine-6-phosphate isomerase (NCBI ptt file) compare
BT1143 -1.1 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT3759 -1.1 -6.0 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3712 -1.1 -1.9 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT4699 -1.1 -1.9 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT0035 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT0429 -1.1 -1.2 indolepyruvate oxidoreductase subunit iorB (NCBI ptt file) compare
BT3210 -1.1 -1.7 cell division protein FtsX (NCBI ptt file) compare
BT0723 -1.1 -1.2 hypothetical protein (NCBI ptt file) compare
BT1752 -1.0 -0.7 hypothetical protein (NCBI ptt file) compare
BT1348 -1.0 -2.6 CDP-abequose synthase (NCBI ptt file) compare
BT2040 -1.0 -3.6 hypothetical protein (NCBI ptt file) compare
BT2375 -1.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT3376 -1.0 -2.9 nucleotide sugar transaminase (NCBI ptt file) compare
BT1564 -1.0 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT1344 -1.0 -2.4 putative glycosyltransferase (NCBI ptt file) compare
BT2170 -1.0 -4.0 hypothetical protein (NCBI ptt file) compare
BT0946 -1.0 -1.7 hypothetical protein (NCBI ptt file) compare
BT0638 -1.0 -2.8 putative methionine aminopeptidase A (NCBI ptt file) compare
BT4698 -1.0 -0.9 conserved hypothetical protein (NCBI ptt file) compare
BT1345 -1.0 -1.8 glycosyltransferase (NCBI ptt file) compare
BT1726 -1.0 -2.5 integrase (NCBI ptt file) compare
BT3761 -1.0 -2.7 N-succinylglutamate synthase (from data) compare
BT0677 -1.0 -1.1 thioredoxin (TRX) (NCBI ptt file) compare
BT1379 -1.0 -3.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT3338 -1.0 -6.9 RND efflux system, inner membrane component BipB (from data) compare
BT1351 -1.0 -1.3 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT0647 -1.0 -1.2 thiamine phosphate pyrophosphorylase (NCBI ptt file) compare
BT1933 -1.0 -1.7 transposase (NCBI ptt file) compare
BT4372 -1.0 -4.1 conserved hypothetical protein (NCBI ptt file) compare
BT1329 -1.0 -1.5 putative thiol peroxidase (NCBI ptt file) compare
BT0887 -1.0 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT4614 -1.0 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT3819 -1.0 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0596 -1.0 -0.8 putative transcriptional regulator (NCBI ptt file) compare
BT4551 -1.0 -0.6 putative GTPase, ThdF family (NCBI ptt file) compare
BT2415 -0.9 -5.5 aspartate aminotransferase (NCBI ptt file) compare
BT4601 -0.9 -2.1 hypothetical protein (NCBI ptt file) compare
BT0180 -0.9 -4.2 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT0376 -0.9 -1.2 putative transcriptional regulator (NCBI ptt file) compare
BT1174 -0.9 -3.1 hypothetical protein (NCBI ptt file) compare
BT2302 -0.9 -0.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3075 -0.9 -5.9 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT3405 -0.9 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT2299 -0.9 -0.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0665 -0.9 -1.3 hypothetical protein (NCBI ptt file) compare
BT4003 -0.9 -1.8 stationary-phase survival protein SurE (NCBI ptt file) compare
BT4304 -0.9 -6.4 putative glycosyltransferase (NCBI ptt file) compare
BT2292 -0.9 -2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1536 -0.9 -2.1 ABC transporter permease (NCBI ptt file) compare
BT2514 -0.9 -1.7 hypothetical protein (NCBI ptt file) compare
BT1733 -0.9 -1.6 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT0546 -0.9 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT2145 -0.9 -4.1 ribonucleoside-diphosphate reductase alpha chain (NCBI ptt file) compare
BT3193 -0.9 -6.0 putative coenzyme A transferase (NCBI ptt file) compare
BT0197 -0.9 -2.1 hypothetical protein (NCBI ptt file) compare
BT1355 -0.9 -2.7 hypothetical protein (NCBI ptt file) compare
BT1354 -0.9 -2.3 putative flippase (NCBI ptt file) compare
BT3935 -0.9 -1.9 aminotransferase (NCBI ptt file) compare
BT3758 -0.9 -2.2 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT0891 -0.9 -0.8 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT2944 -0.9 -2.8 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1346 -0.9 -2.0 capsule biosynthesis protein capA (NCBI ptt file) compare
BT3260 -0.9 -1.2 DNA polymerase I (NCBI ptt file) compare
BT4195 -0.9 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT4048 -0.9 -3.8 hypothetical protein (NCBI ptt file) compare
BT1197 -0.9 -1.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1031 -0.9 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2161 -0.9 -1.9 50S ribosomal protein L9 (NCBI ptt file) compare
BT0015 -0.9 -1.2 rteB, two-component system response regulator (NCBI ptt file) compare
BT1341 -0.9 -2.0 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT1804 -0.9 -1.6 electron transfer flavoprotein beta-subunit (NCBI ptt file) compare
BT0529 -0.9 -1.2 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT4442 -0.9 -1.1 hypothetical protein (NCBI ptt file) compare
BT2155 -0.8 -2.6 hypothetical protein (NCBI ptt file) compare
BT4766 -0.8 -2.2 hypothetical protein (NCBI ptt file) compare
BT2546 -0.8 -5.5 transcriptional regulator (NCBI ptt file) compare
BT3371 -0.8 -1.6 putative glycosyltransferase yibD (NCBI ptt file) compare
BT4478 -0.8 -1.6 hypothetical protein (NCBI ptt file) compare
BT2049 -0.8 -1.1 transcriptional regulator (NCBI ptt file) compare
BT0133 -0.8 -2.4 putative sugar phosphate isomerase (NCBI ptt file) compare
BT1356 -0.8 -1.9 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT3348 -0.8 -3.4 unsaturated glucuronide lyase acting on chondroitin/heparin disaccharides (EC 3.2.1.180) (from data) compare
BT3549 -0.8 -3.6 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT2519 -0.8 -2.3 putative glycine cleavage system H protein (NCBI ptt file) compare
BT0090 -0.8 -2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4595 -0.8 -1.8 hypothetical protein (NCBI ptt file) compare
BT1458 -0.8 -2.2 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT1572 -0.8 -2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0838 -0.8 -1.5 putative RNA methyltransferase (NCBI ptt file) compare
BT1152 -0.8 -1.8 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT1698 -0.8 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT1955 -0.8 -4.0 putative cell wall biogenesis protein (NCBI ptt file) compare
BT0585 -0.8 -0.7 conserved hypothetical protein (NCBI ptt file) compare
BT1064 -0.8 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0061 -0.8 -1.4 putative tyrosine-protein kinase ptk (NCBI ptt file) compare
BT0739 -0.8 -1.0 hypothetical protein (NCBI ptt file) compare
BT3920 -0.8 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT3843 -0.8 -1.7 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) compare
BT3074 -0.8 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2078 -0.8 -4.6 dihydroxy-acid dehydratase (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse; zymosan and methotrexate experiments

For mouse; zymosan and methotrexate Methotrexate across organisms