Experiment set35IT092 for Klebsiella michiganensis M5al

Compare to:

K. M5a1 KLEB26 MOI 0.1

Group: phage
Media: LB_plus_SM_buffer + Kan (50 ug/ml)
Culturing: Koxy_ML2a, 48 well microplate; Epoch2, Aerobic, at 30 (C), shaken=double orbital, continuous, 205cpm
By: Vivek on 3/9/23
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride, 100 mM Sodium Chloride, 4 mM Magnesium sulfate, 0.005 vol% Gelatin, 25 mM Tris hydrochloride

Specific Phenotypes

For 11 genes in this experiment

SEED Subsystems

Subsystem #Specific
LOS core oligosaccharide biosynthesis 1
NusA-TFII Cluster 1
Translation initiation factors eukaryotic and archaeal 1
Universal GTPases 1
linker unit-arabinogalactan synthesis 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
UDP-α-D-galactofuranose biosynthesis 2 1 1
dTDP-β-D-fucofuranose biosynthesis 4 3 1
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis 6 4 1
peptidoglycan recycling II 10 7 1
O-antigen building blocks biosynthesis (E. coli) 11 11 1
peptidoglycan recycling I 14 14 1
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 18 1 1
superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis 19 9 1
superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis 33 13 1