Experiment set34S75 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003

200 most detrimental genes:

  gene name fitness t score description  
BT0585 +1.9 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0596 +1.6 1.9 putative transcriptional regulator (NCBI ptt file) compare
BT3438 +1.6 3.9 hypothetical protein (NCBI ptt file) compare
BT0151 +1.5 2.0 hypothetical protein (NCBI ptt file) compare
BT0238 +1.4 5.4 transcriptional regulator (NCBI ptt file) compare
BT1112 +1.4 1.5 transposase (NCBI ptt file) compare
BT1561 +1.4 1.3 hypothetical protein (NCBI ptt file) compare
BT0814 +1.3 3.6 conserved hypothetical protein, putative outer membrane protein (NCBI ptt file) compare
BT4123 +1.3 8.1 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT4249 +1.3 1.5 hypothetical protein (NCBI ptt file) compare
BT2490 +1.3 3.3 hypothetical protein (NCBI ptt file) compare
BT3197 +1.3 1.2 hypothetical protein (NCBI ptt file) compare
BT3964 +1.3 4.2 putative secretory protein (NCBI ptt file) compare
BT4469 +1.3 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT3690 +1.3 3.3 putative membrane protein (NCBI ptt file) compare
BT1055 +1.2 1.8 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT4421 +1.2 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT4720 +1.2 2.2 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1070 +1.2 5.5 conserved hypothetical protein (NCBI ptt file) compare
BT0178 +1.2 2.8 hypothetical protein (NCBI ptt file) compare
BT1765 +1.2 6.9 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT3503 +1.2 2.0 glutaminase A (NCBI ptt file) compare
BT1072 +1.2 2.0 hypothetical protein (NCBI ptt file) compare
BT2589 +1.2 3.6 type I restriction enzyme, M subunit (NCBI ptt file) compare
BT0674 +1.2 2.8 carboxynorspermidine decarboxylase (NCBI ptt file) compare
BT3796 +1.2 6.0 putative secreted sulfatase ydeN precursor (NCBI ptt file) compare
BT1752 +1.2 3.1 hypothetical protein (NCBI ptt file) compare
BT3441 +1.1 2.4 hypothetical protein (NCBI ptt file) compare
BT0846 +1.1 2.5 hypothetical protein (NCBI ptt file) compare
BT0474 +1.1 3.5 D-glycero-D-manno-heptose 1-phosphate kinase (NCBI ptt file) compare
BT0015 +1.1 2.3 rteB, two-component system response regulator (NCBI ptt file) compare
BT2932 +1.1 1.9 transcriptional regulator (NCBI ptt file) compare
BT1313 +1.1 3.0 muconate cycloisomerase (NCBI ptt file) compare
BT0844 +1.1 1.2 hypothetical protein (NCBI ptt file) compare
BT0776 +1.1 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT3509 +1.1 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT1058 +1.1 6.8 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0051 +1.0 3.5 putative glycosyltransferase (NCBI ptt file) compare
BT2381 +1.0 2.7 putative acetyltransferase (NCBI ptt file) compare
BT0831 +1.0 5.6 ATP-dependent RNA helicase (NCBI ptt file) compare
BT3755 +1.0 6.6 acetyl-coenzyme A synthetase (NCBI ptt file) compare
BT3974 +1.0 4.1 conserved hypothetical protein (NCBI ptt file) compare
BT3737 +1.0 1.5 hypothetical protein (NCBI ptt file) compare
BT1388 +1.0 2.1 integral membrane protein (NCBI ptt file) compare
BT1369 +1.0 1.7 hypothetical protein (NCBI ptt file) compare
BT0567 +1.0 3.0 putative protein involved in barrier function of the cell envelope (NCBI ptt file) compare
BT0944 +1.0 1.3 hypothetical protein (NCBI ptt file) compare
BT2057 +1.0 2.5 hypothetical protein (NCBI ptt file) compare
BT3962 +1.0 4.7 putative sugar hydrolase (NCBI ptt file) compare
BT2646 +0.9 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2181 +0.9 2.2 transcriptional regulator (NCBI ptt file) compare
BT2340 +0.9 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT4646 +0.9 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3963 +0.9 5.4 putative sugar hydrolase (NCBI ptt file) compare
BT0751 +0.9 2.6 putative efflux pump component protein (NCBI ptt file) compare
BT1412 +0.9 1.6 iron-sulfur flavoprotein (NCBI ptt file) compare
BT0756 +0.9 2.4 iduronate 2-sulfatase precursor (NCBI ptt file) compare
BT4027 +0.9 1.2 hypothetical protein (NCBI ptt file) compare
BT2853 +0.9 1.3 hypothetical protein (NCBI ptt file) compare
BT_0687 +0.9 3.6 hydroxylamine reductase (RefSeq) compare
BT3289 +0.9 4.6 conserved hypothetical protein (NCBI ptt file) compare
BT0153 +0.9 2.6 hypothetical protein (NCBI ptt file) compare
BT0660 +0.9 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1217 +0.9 2.5 two-component system response regulator (NCBI ptt file) compare
BT2027 +0.9 1.6 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0017 +0.8 2.3 hypothetical protein (NCBI ptt file) compare
BT0508 +0.8 2.2 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2471 +0.8 1.7 hypothetical protein (NCBI ptt file) compare
BT1470 +0.8 1.8 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0782 +0.8 0.7 hypothetical protein (NCBI ptt file) compare
BT4068 +0.8 3.6 hypothetical protein (NCBI ptt file) compare
BT1612 +0.8 3.0 hypothetical protein (NCBI ptt file) compare
BT1203 +0.8 1.6 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT2178 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT3799 +0.8 4.4 putative sulfatase yidJ (NCBI ptt file) compare
BT0468 +0.8 2.4 putative F420H2-dehydrogenase 40 kDa subunit (NCBI ptt file) compare
BT0462 +0.8 1.8 putative transcriptional regulator (NCBI ptt file) compare
BT4593 +0.8 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1944 +0.8 1.3 putative transposase (NCBI ptt file) compare
BT0780 +0.8 1.5 acetyltransferase (NCBI ptt file) compare
BT3184 +0.8 5.5 L-aspartate oxidase (NCBI ptt file) compare
BT1516 +0.8 2.5 replicative DNA helicase (NCBI ptt file) compare
BT1309 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT4064 +0.8 3.3 NADH dehydrogenase I, chain H (NCBI ptt file) compare
BT0255 +0.8 2.0 hypothetical protein (NCBI ptt file) compare
BT3164 +0.8 2.3 quinolinate synthetase A (NCBI ptt file) compare
BT1472 +0.8 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0291 +0.8 2.1 integrase (NCBI ptt file) compare
BT2018 +0.8 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0650 +0.8 3.1 thiamine biosynthesis protein ThiC (NCBI ptt file) compare
BT3434 +0.8 4.4 hypothetical protein (NCBI ptt file) compare
BT1071 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT2344 +0.8 1.3 hypothetical protein (NCBI ptt file) compare
BT1684 +0.8 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0932 +0.8 1.3 hypothetical protein (NCBI ptt file) compare
BT3117 +0.7 2.4 putative oxidoreductase (NCBI ptt file) compare
BT4607 +0.7 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1200 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT0398 +0.7 2.0 polysaccharide export outer membrane protein (NCBI ptt file) compare
BT0689 +0.7 1.6 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0783 +0.7 0.7 hypothetical protein (NCBI ptt file) compare
BT2600 +0.7 1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1314 +0.7 1.8 dipeptidyl-peptidase VI (NCBI ptt file) compare
BT1267 +0.7 2.2 outer membrane protein (NCBI ptt file) compare
BT1437 +0.7 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0940 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT0514 +0.7 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0581 +0.7 1.1 putative acetyltransferase, GNAT family (NCBI ptt file) compare
BT2122 +0.7 0.6 lysyl-tRNA synthetase (NCBI ptt file) compare
BT0829 +0.7 2.8 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT0879 +0.7 2.4 ABC transporter, permease protein (NCBI ptt file) compare
BT1329 +0.7 1.9 putative thiol peroxidase (NCBI ptt file) compare
BT4491 +0.7 3.1 hypothetical protein (NCBI ptt file) compare
BT3342 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT1250 +0.7 3.0 conserved hypothetical protein, putative outer membrane efflux protein (NCBI ptt file) compare
BT2283 +0.7 0.6 hypothetical protein (NCBI ptt file) compare
BT0817 +0.7 2.1 lipoprotein, function unknown (NCBI ptt file) compare
BT3190 +0.7 2.3 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0215 +0.7 0.6 iron uptake regulatory protein (NCBI ptt file) compare
BT3010 +0.7 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3041 +0.7 2.3 hypothetical protein (NCBI ptt file) compare
BT3701 SusD +0.7 3.9 SusD, outer membrane protein (NCBI ptt file) compare
BT1338 +0.7 2.7 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) compare
BT2045 +0.7 0.7 hypothetical protein (NCBI ptt file) compare
BT3691 +0.7 1.5 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT3443 +0.7 1.6 conserved hypothetical protein with a conserved domain (NCBI ptt file) compare
BT2410 +0.7 1.8 putative acetyltransferase (NCBI ptt file) compare
BT0972 +0.7 1.0 putative oxidoreductase (NCBI ptt file) compare
BT2360 +0.7 2.5 transcriptional regulator (NCBI ptt file) compare
BT2240 +0.7 2.5 TPR-domain containing protein (NCBI ptt file) compare
BT0282 +0.7 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2555 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT2258 +0.7 1.6 GTP-binding protein (NCBI ptt file) compare
BT0611 +0.7 1.3 glycosyltransferase (NCBI ptt file) compare
BT4526 +0.6 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0432 +0.6 2.4 putative endonuclease BB0411 (NCBI ptt file) compare
BT4066 +0.6 2.9 NADH dehydrogenase I, chain B (NCBI ptt file) compare
p5482_24 +0.6 2.7 hypothetical protein (NCBI) compare
BT4609 +0.6 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0427 +0.6 0.7 xanthine phosphoribosyltransferase (NCBI ptt file) compare
BT4223 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT2689 +0.6 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0878 +0.6 0.9 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT4343 +0.6 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT1803 +0.6 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3847 +0.6 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3442 +0.6 4.7 conserved hypothetical protein (NCBI ptt file) compare
BT4483 +0.6 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1459 +0.6 1.9 putative two-component system sensor histidine kinase, no kinase domain (NCBI ptt file) compare
BT3286 +0.6 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0225 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT2688 +0.6 1.4 outer membrane efflux protein (NCBI ptt file) compare
BT4422 +0.6 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT2023 +0.6 2.1 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0395 +0.6 1.4 hypothetical protein (NCBI ptt file) compare
BT4525 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT1256 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0028 +0.6 1.8 alkaline phosphatase (NCBI ptt file) compare
BT3627 +0.6 2.1 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT1421 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT2334 +0.6 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2815 +0.6 1.2 putative mutT family protein (NCBI ptt file) compare
BT2537 +0.6 1.4 hypothetical protein (NCBI ptt file) compare
BT1059 +0.6 2.0 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT2405 +0.6 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT0967 +0.6 0.8 hypothetical protein (NCBI ptt file) compare
BT0226 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT0453 +0.6 1.3 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT1213 +0.6 1.7 periplasmic component of efflux system (NCBI ptt file) compare
BT2281 +0.6 1.2 hypothetical protein (NCBI ptt file) compare
p5482_25 +0.6 3.1 hypothetical protein (NCBI) compare
BT0491 +0.6 0.6 conserved hypothetical protein (NCBI ptt file) compare
BT3970 +0.6 2.7 hypothetical protein (NCBI ptt file) compare
BT0493 +0.6 1.2 hypothetical protein (NCBI ptt file) compare
BT0613 +0.6 1.8 putative membrane protein involved in polysaccharide export (NCBI ptt file) compare
BT0661 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT0443 +0.6 0.8 thermostable beta-glucosidase B (NCBI ptt file) compare
BT4455 +0.6 1.4 oxidoreductase, putative glycolate oxidase (NCBI ptt file) compare
BT0237 +0.6 3.5 conserved hypothetical protein (NCBI ptt file) compare
BT2542 +0.6 1.5 putative haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT3812 +0.6 1.5 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT2214 +0.6 2.2 hypothetical protein (NCBI ptt file) compare
BT3042 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT2383 +0.6 3.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4258 +0.6 1.8 putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file) compare
BT4363 +0.6 2.1 putative alkaline phosphatase (NCBI ptt file) compare
BT2974 +0.6 0.9 hypothetical protein (NCBI ptt file) compare
BT1214 +0.6 1.6 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1257 +0.6 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1392 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1435 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT1876 +0.6 1.8 putative anti-sigma factor (NCBI ptt file) compare
BT1657 +0.6 1.8 integrase (NCBI ptt file) compare
BT4065 +0.6 3.7 NADH dehydrogenase I, chain D (NCBI ptt file) compare
BT1713 +0.6 1.3 putative acylneuraminate cytidylyltransferase (NCBI ptt file) compare
BT1898 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT3798 +0.5 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2449 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT1050 +0.5 1.7 hypothetical protein (NCBI ptt file) compare
BT1698 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

For 4 genes in this experiment

For mouse_coculture diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 in Bacteroides thetaiotaomicron VPI-5482

For mouse_coculture diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 across organisms