Experiment set34S73 for Bacteroides thetaiotaomicron VPI-5482

cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003

Group: mouse_coculture
Media: + diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003
Culturing: Btheta_ML6b
By: Anthony Shiver on 4/2/24

Specific Phenotypes

For 5 genes in this experiment

For mouse_coculture diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 in Bacteroides thetaiotaomicron VPI-5482

For mouse_coculture diet=StandardDiet; sample=FecalPellet; coculture=Bbreve_UCC2003 across organisms

SEED Subsystems

Subsystem	#Specific
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Alanine and aspartate metabolism
• Starch and sucrose metabolism
• Nitrogen metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
L-glutamate degradation II	2	2	1
L-aspartate degradation III (anaerobic)	3	2	1
L-aspartate degradation II (aerobic)	3	2	1
superpathway of L-aspartate and L-asparagine biosynthesis	4	4	1
L-canavanine degradation II	6	1	1