Experiment set32S22 for Burkholderia phytofirmans PsJN

Compare to:

LB 37C

200 most important genes:

  gene name fitness t score description  
BPHYT_RS04370 -3.0 -2.0 glycosyl transferase compare
BPHYT_RS17640 -2.8 -1.9 2-alkenal reductase compare
BPHYT_RS16175 -2.8 -2.6 hemolysin D compare
BPHYT_RS16210 -2.0 -3.7 peptidase compare
BPHYT_RS08960 -2.0 -1.6 threonine synthase compare
BPHYT_RS02765 -1.9 -1.5 cytochrome BD oxidase subunit I compare
BPHYT_RS03400 -1.8 -1.3 ATP-dependent DNA helicase RecG compare
BPHYT_RS25845 -1.6 -1.7 RND transporter MFP subunit compare
BPHYT_RS14865 -1.6 -1.6 UDP-glucose 6-dehydrogenase compare
BPHYT_RS10135 -1.6 -1.6 hypothetical protein compare
BPHYT_RS14400 -1.6 -3.0 anti-sigma factor compare
BPHYT_RS04385 -1.6 -2.8 nucleoside-diphosphate sugar oxidoreductase compare
BPHYT_RS34490 -1.5 -1.2 hypothetical protein compare
BPHYT_RS06410 -1.5 -4.0 transcriptional regulator compare
BPHYT_RS36275 -1.5 -1.5 hypothetical protein compare
BPHYT_RS14195 -1.4 -2.0 carbamoyl phosphate synthase small subunit compare
BPHYT_RS04285 -1.4 -1.4 rhamnosyltransferase compare
BPHYT_RS36005 -1.4 -3.1 hypothetical protein compare
BPHYT_RS36000 -1.4 -1.7 hypothetical protein compare
BPHYT_RS01485 -1.3 -1.0 histidine kinase compare
BPHYT_RS30450 -1.3 -1.0 ABC transporter permease compare
BPHYT_RS16215 -1.3 -4.3 sensor histidine kinase compare
BPHYT_RS17240 -1.3 -1.0 cell division protein FtsW compare
BPHYT_RS10095 -1.3 -1.4 integrase compare
BPHYT_RS14060 -1.3 -2.1 peptidase M23 compare
BPHYT_RS27560 -1.3 -2.2 histidine kinase compare
BPHYT_RS05290 -1.3 -1.2 hypothetical protein compare
BPHYT_RS06175 -1.2 -3.1 LPS biosynthesis compare
BPHYT_RS12060 -1.2 -1.4 hypothetical protein compare
BPHYT_RS34815 -1.2 -2.4 ABC transporter compare
BPHYT_RS14395 -1.2 -4.9 sugar dehydratase compare
BPHYT_RS16835 -1.2 -4.4 glyceraldehyde-3-phosphate dehydrogenase compare
BPHYT_RS28600 -1.2 -2.1 ArsC family transcriptional regulator compare
BPHYT_RS26855 -1.2 -2.0 carboxyvinyl-carboxyphosphonate phosphorylmutase compare
BPHYT_RS03725 -1.1 -0.9 serine hydroxymethyltransferase compare
BPHYT_RS08245 -1.1 -4.1 anti-sigma factor compare
BPHYT_RS10475 -1.1 -2.0 mammalian cell entry protein compare
BPHYT_RS08385 -1.1 -1.6 secretion protein compare
BPHYT_RS17920 -1.1 -0.9 protein CyaY compare
BPHYT_RS21460 -1.1 -1.4 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS26390 -1.0 -0.9 antibiotic resistance protein compare
BPHYT_RS29870 -1.0 -1.8 2-dehydropantoate 2-reductase compare
BPHYT_RS05570 -1.0 -2.2 hypothetical protein compare
BPHYT_RS02590 -1.0 -4.6 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
BPHYT_RS33990 -1.0 -1.0 ATPase compare
BPHYT_RS36025 -1.0 -2.5 hypothetical protein compare
BPHYT_RS16880 -1.0 -1.0 malic enzyme compare
BPHYT_RS16675 -1.0 -0.7 dihydroorotase compare
BPHYT_RS09385 -1.0 -1.1 FAD-dependent oxidoreductase compare
BPHYT_RS16270 -1.0 -3.8 phosphoglycerate kinase compare
BPHYT_RS28955 -1.0 -1.9 hypothetical protein compare
BPHYT_RS12925 -1.0 -0.8 exodeoxyribonuclease III compare
BPHYT_RS25970 -0.9 -1.2 urea amidolyase compare
BPHYT_RS13610 -0.9 -2.2 MerR family transcriptional regulator compare
BPHYT_RS07515 -0.9 -1.7 photosystem reaction center subunit H compare
BPHYT_RS31050 -0.9 -1.1 epimerase compare
BPHYT_RS21485 -0.9 -1.1 hypothetical protein compare
BPHYT_RS24315 -0.9 -1.0 phosphoribosyltransferase compare
BPHYT_RS26510 -0.9 -1.5 transcriptional regulator compare
BPHYT_RS31840 -0.9 -1.6 anhydrase compare
BPHYT_RS11400 -0.9 -1.9 hypothetical protein compare
BPHYT_RS20440 -0.9 -1.1 IclR family transcriptional regulator compare
BPHYT_RS35835 -0.9 -3.0 hypothetical protein compare
BPHYT_RS29720 -0.9 -1.0 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
BPHYT_RS18710 -0.9 -2.0 membrane protein compare
BPHYT_RS00705 -0.9 -1.7 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS32290 -0.8 -1.7 hypothetical protein compare
BPHYT_RS21340 -0.8 -2.6 2OG-Fe(II) oxygenase compare
BPHYT_RS01585 -0.8 -3.8 major facilitator superfamily protein compare
BPHYT_RS34805 -0.8 -4.0 ABC transporter compare
BPHYT_RS25335 -0.8 -0.9 hypothetical protein compare
BPHYT_RS13245 -0.8 -4.0 hypothetical protein compare
BPHYT_RS02130 -0.8 -2.6 hydroxymethylglutaryl-CoA lyase compare
BPHYT_RS21870 -0.8 -2.2 hypothetical protein compare
BPHYT_RS14855 -0.8 -1.0 ADP-L-glycero-D-manno-heptose-6-epimerase compare
BPHYT_RS20865 -0.8 -1.7 2-hydroxyacid dehydrogenase compare
BPHYT_RS07325 -0.8 -0.8 GntR family transcriptional regulator compare
BPHYT_RS11955 -0.8 -2.2 hemolysin D compare
BPHYT_RS18630 -0.8 -1.7 allophanate hydrolase compare
BPHYT_RS04400 -0.8 -1.4 Crp/Fnr family transcriptional regulator compare
BPHYT_RS33655 -0.8 -2.9 MarR family transcriptional regulator compare
BPHYT_RS24925 -0.8 -1.1 cytochrome O ubiquinol oxidase compare
BPHYT_RS10740 -0.8 -1.0 LuxR family transcriptional regulator compare
BPHYT_RS03265 -0.8 -2.0 hypothetical protein compare
BPHYT_RS32395 -0.8 -0.9 hypothetical protein compare
BPHYT_RS09645 -0.8 -2.9 ankyrin compare
BPHYT_RS10680 -0.8 -1.4 LysR family transcriptional regulator compare
BPHYT_RS00980 -0.8 -0.9 GCN5 family acetyltransferase compare
BPHYT_RS20180 -0.8 -2.0 sugar ABC transporter substrate-binding protein compare
BPHYT_RS36030 -0.7 -3.5 hypothetical protein compare
BPHYT_RS14390 -0.7 -2.6 peptidase compare
BPHYT_RS11765 -0.7 -0.8 polyamine ABC transporter permease compare
BPHYT_RS09620 -0.7 -1.0 aminodeoxychorismate lyase compare
BPHYT_RS12615 -0.7 -1.0 dihydrodipicolinate synthase compare
BPHYT_RS06470 -0.7 -0.9 membrane protein compare
BPHYT_RS27160 -0.7 -1.2 hypothetical protein compare
BPHYT_RS23315 -0.7 -1.0 hypothetical protein compare
BPHYT_RS20680 -0.7 -2.6 LacI family transcriptional regulator compare
BPHYT_RS23475 -0.7 -1.2 luciferase compare
BPHYT_RS02975 -0.7 -1.0 membrane protein compare
BPHYT_RS27370 -0.7 -1.1 CoA transferase compare
BPHYT_RS11680 -0.7 -1.3 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS05900 -0.7 -1.8 hypothetical protein compare
BPHYT_RS19620 -0.7 -2.0 general secretion pathway protein GspH compare
BPHYT_RS06335 -0.7 -0.9 CopG family transcriptional regulator compare
BPHYT_RS25095 -0.7 -1.9 AraC family transcriptional regulator compare
BPHYT_RS11265 -0.7 -1.4 hypothetical protein compare
BPHYT_RS23570 -0.7 -2.3 chemotaxis protein CheY compare
BPHYT_RS33765 -0.7 -0.8 membrane protein compare
BPHYT_RS00325 -0.7 -1.5 hypothetical protein compare
BPHYT_RS02930 -0.7 -0.9 KpsF/GutQ family protein compare
BPHYT_RS06610 -0.7 -0.9 triosephosphate isomerase compare
BPHYT_RS09885 -0.7 -1.8 isomerase compare
BPHYT_RS17890 -0.7 -0.7 shikimate kinase compare
BPHYT_RS28680 -0.7 -1.8 porin compare
BPHYT_RS13935 -0.7 -1.2 mannosyltransferase compare
BPHYT_RS18340 -0.7 -0.8 n-acetyl-gamma-glutamyl-phosphate reductase compare
BPHYT_RS15020 -0.7 -4.1 tetratricopeptide repeat protein compare
BPHYT_RS21905 -0.7 -0.7 IclR family transcriptional regulator compare
BPHYT_RS13160 -0.7 -1.1 membrane protein compare
BPHYT_RS05870 -0.7 -2.5 hypothetical protein compare
BPHYT_RS29520 -0.7 -0.6 hypothetical protein compare
BPHYT_RS20425 -0.7 -1.1 hypothetical protein compare
BPHYT_RS13470 -0.7 -0.7 arylsulfate sulfotransferase compare
BPHYT_RS23205 -0.7 -2.1 alkylhydroperoxidase compare
BPHYT_RS24220 -0.7 -1.6 alpha/beta hydrolase compare
BPHYT_RS29320 -0.7 -1.3 histidine kinase compare
BPHYT_RS30430 -0.7 -2.3 transketolase compare
BPHYT_RS32675 -0.7 -1.5 2-methylcitrate dehydratase compare
BPHYT_RS08615 -0.7 -1.0 hypothetical protein compare
BPHYT_RS07095 -0.7 -1.4 LysR family transcriptional regulator compare
BPHYT_RS13395 -0.7 -1.4 endoribonuclease L-PSP compare
BPHYT_RS05645 -0.7 -1.9 hypothetical protein compare
BPHYT_RS23525 -0.7 -1.0 hypothetical protein compare
BPHYT_RS19565 -0.7 -4.0 gamma-glutamyl:cysteine ligase compare
BPHYT_RS33450 -0.7 -1.4 LysR family transcriptional regulator compare
BPHYT_RS08565 -0.6 -0.3 dihydroorotate dehydrogenase compare
BPHYT_RS03645 -0.6 -0.8 tRNA dimethylallyltransferase compare
BPHYT_RS10040 -0.6 -0.8 hypothetical protein compare
BPHYT_RS17155 -0.6 -4.5 peptidase A24 compare
BPHYT_RS32210 -0.6 -1.0 hypothetical protein compare
BPHYT_RS23460 -0.6 -0.7 AraC family transcriptional regulator compare
BPHYT_RS14920 -0.6 -2.6 hypothetical protein compare
BPHYT_RS14945 -0.6 -1.8 phosphoglycolate phosphatase compare
BPHYT_RS03240 -0.6 -1.5 formate dehydrogenase accessory protein FdhD compare
BPHYT_RS09755 -0.6 -0.7 glycosyl transferase family 1 compare
BPHYT_RS04875 -0.6 -1.9 alpha-ribazole phosphatase compare
BPHYT_RS09095 -0.6 -2.0 NADPH:quinone oxidoreductase compare
BPHYT_RS25290 -0.6 -1.0 membrane protein compare
BPHYT_RS06190 -0.6 -1.4 heptosyltransferase compare
BPHYT_RS09980 -0.6 -0.9 TetR family transcriptional regulator compare
BPHYT_RS13585 -0.6 -2.0 amino acid ABC transporter permease compare
BPHYT_RS03945 -0.6 -1.4 hypothetical protein compare
BPHYT_RS25515 -0.6 -1.4 glutathione S-transferase compare
BPHYT_RS07770 -0.6 -1.6 hypothetical protein compare
BPHYT_RS21840 -0.6 -1.1 hypothetical protein compare
BPHYT_RS04340 -0.6 -1.6 hypothetical protein compare
BPHYT_RS21150 -0.6 -2.3 NAD(P) transhydrogenase subunit alpha compare
BPHYT_RS09105 -0.6 -2.9 protein-L-isoaspartate O-methyltransferase compare
BPHYT_RS11080 -0.6 -1.7 hypothetical protein compare
BPHYT_RS03465 -0.6 -2.8 hypothetical protein compare
BPHYT_RS03065 -0.6 -1.2 LuxR family transcriptional regulator compare
BPHYT_RS31195 -0.6 -3.1 peptide ABC transporter permease compare
BPHYT_RS10590 -0.6 -1.8 hypothetical protein compare
BPHYT_RS27920 -0.6 -0.9 tricarballylate utilization protein B compare
BPHYT_RS33135 -0.6 -1.1 LysR family transcriptional regulator compare
BPHYT_RS04335 -0.6 -0.8 membrane protein compare
BPHYT_RS21805 -0.6 -1.3 transcriptional regulator compare
BPHYT_RS19905 -0.6 -1.3 membrane protein compare
BPHYT_RS27850 -0.6 -1.0 hemerythrin compare
BPHYT_RS20750 -0.6 -1.2 LacI family transcriptional regulator compare
BPHYT_RS20520 -0.6 -0.8 transcriptional regulator compare
BPHYT_RS17520 -0.6 -1.7 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase compare
BPHYT_RS27430 -0.6 -1.0 LysR family transcriptional regulator compare
BPHYT_RS32055 -0.6 -1.7 hypothetical protein compare
BPHYT_RS23075 -0.6 -2.1 GntR family transcriptional regulator compare
BPHYT_RS10265 -0.6 -1.2 aminotransferase compare
BPHYT_RS29545 -0.6 -1.2 osmotically inducible protein C compare
BPHYT_RS16905 -0.6 -1.9 orotidine 5'-phosphate decarboxylase compare
BPHYT_RS30040 -0.6 -0.8 hypothetical protein compare
BPHYT_RS21645 -0.6 -1.3 LysR family transcriptional regulator compare
BPHYT_RS11285 -0.6 -0.7 LacI family transcription regulator compare
BPHYT_RS06950 -0.6 -2.6 LysR family transcriptional regulator compare
BPHYT_RS23390 -0.6 -0.8 hypothetical protein compare
BPHYT_RS35965 -0.6 -2.1 hypothetical protein compare
BPHYT_RS20840 -0.6 -1.2 beta-lactamase compare
BPHYT_RS09860 -0.6 -0.6 pilus assembly protein PilP compare
BPHYT_RS09710 -0.6 -2.5 undecaprenyl-phosphate glucose phosphotransferase compare
BPHYT_RS28025 -0.6 -1.0 3-hydroxyisobutyrate dehydrogenase compare
BPHYT_RS20970 -0.6 -1.0 hypothetical protein compare
BPHYT_RS10720 -0.6 -0.8 hypothetical protein compare
BPHYT_RS17800 -0.6 -1.9 hypothetical protein compare
BPHYT_RS14180 -0.6 -1.6 membrane protein compare
BPHYT_RS33355 -0.6 -1.7 oxalyl-CoA decarboxylase compare
BPHYT_RS30285 -0.6 -1.1 succinate-semialdehyde dehydrogenase compare
BPHYT_RS24655 -0.5 -1.4 amino acid ABC transporter substrate-binding protein compare
BPHYT_RS28715 -0.5 -1.6 cupin compare
BPHYT_RS22930 -0.5 -0.8 type II secretion system protein compare
BPHYT_RS04065 -0.5 -1.5 hypothetical protein compare
BPHYT_RS29945 -0.5 -0.9 histidine kinase compare


Specific Phenotypes

None in this experiment

For Burkholderia phytofirmans PsJN in temperature experiments