Experiment set32IT057 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -9.8 -6.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -8.9 -13.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS02995 -7.3 -10.6 aspartate carbamoyltransferase compare
BWI76_RS19050 -7.1 -8.5 NAD(P)-dependent oxidoreductase compare
BWI76_RS10990 -7.0 -3.3 dihydroorotase compare
BWI76_RS00600 -6.6 -8.0 LacI family transcriptional regulator compare
BWI76_RS01210 -6.4 -3.4 tyrosine recombinase XerC compare
BWI76_RS09645 -6.0 -1.9 thioredoxin-disulfide reductase compare
BWI76_RS19055 -6.0 -10.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS19060 -5.8 -17.4 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS19045 -5.7 -6.9 capsular polysaccharide biosynthesis protein compare
BWI76_RS19040 -5.7 -3.9 hypothetical protein compare
BWI76_RS09910 -5.3 -17.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS19070 -5.2 -11.6 rhamnosyltransferase compare
BWI76_RS15110 -5.1 -7.8 putative excinuclease ABC subunit A compare
BWI76_RS08430 -4.3 -6.9 succinate--CoA ligase subunit alpha compare
BWI76_RS02530 -4.1 -2.7 tRNA dimethylallyltransferase compare
BWI76_RS23265 -4.1 -3.2 hypothetical protein compare
BWI76_RS04510 -4.0 -2.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19010 -3.8 -2.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS08210 -3.8 -1.6 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS19065 -3.7 -16.0 dTDP-glucose 4,6-dehydratase compare
BWI76_RS19035 -3.7 -3.6 dTDP-rhamnosyl transferase compare
BWI76_RS12285 -3.6 -3.1 hypothetical protein compare
BWI76_RS12090 -3.5 -3.3 HNH endonuclease compare
BWI76_RS04705 -3.5 -6.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS08530 -3.5 -2.1 protein TolA compare
BWI76_RS23330 -3.4 -3.9 transcriptional regulator GalR compare
BWI76_RS11965 -3.4 -4.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS13915 -3.4 -8.1 magnesium transport protein MgtC compare
BWI76_RS02815 -3.3 -2.4 fructose-bisphosphatase class I compare
BWI76_RS15825 -3.3 -1.7 hypothetical protein compare
BWI76_RS21370 -3.2 -1.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS27390 -3.2 -4.5 ribonuclease PH compare
BWI76_RS22420 -3.2 -2.2 LacI family transcriptional regulator compare
BWI76_RS08405 -3.1 -2.4 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS26075 -3.1 -4.2 DNA adenine methylase compare
BWI76_RS15115 -3.1 -3.0 MFS transporter compare
BWI76_RS23830 -3.1 -5.8 hypothetical protein compare
BWI76_RS08425 -3.0 -3.4 succinyl-CoA ligase subunit beta compare
BWI76_RS09190 -2.9 -3.5 hypothetical protein compare
BWI76_RS25425 -2.8 -1.0 arginine repressor compare
BWI76_RS14770 -2.7 -1.4 PTS IIA 2 domain protein compare
BWI76_RS09640 -2.6 -2.3 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS08520 -2.6 -1.7 colicin transporter TolQ compare
BWI76_RS24900 -2.6 -2.1 DeoR family transcriptional regulator compare
BWI76_RS07725 -2.6 -1.4 iron-enterobactin transporter permease compare
BWI76_RS03080 -2.6 -3.3 (Fe-S)-cluster assembly protein compare
BWI76_RS01800 -2.5 -3.7 glucose-6-phosphate isomerase compare
BWI76_RS15225 -2.5 -1.6 DeoR family transcriptional regulator compare
BWI76_RS21140 -2.5 -2.2 molecular chaperone HscA compare
BWI76_RS20140 -2.5 -4.7 NADH-quinone oxidoreductase subunit L compare
BWI76_RS08390 -2.5 -3.5 hypothetical protein compare
BWI76_RS06535 -2.5 -4.2 endopeptidase La compare
BWI76_RS01220 -2.5 -5.0 DNA-dependent helicase II compare
BWI76_RS01385 -2.5 -2.4 potassium transporter compare
BWI76_RS20155 -2.4 -2.1 NADH-quinone oxidoreductase subunit I compare
BWI76_RS20135 -2.4 -4.1 NADH-quinone oxidoreductase subunit M compare
BWI76_RS08535 -2.4 -1.2 translocation protein TolB compare
BWI76_RS24740 -2.4 -3.8 GntR family transcriptional regulator compare
BWI76_RS22625 -2.2 -1.7 transcriptional regulator compare
BWI76_RS27165 -2.2 -4.1 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS12170 -2.2 -2.3 hypothetical protein compare
BWI76_RS23240 -2.2 -1.5 exonuclease V subunit gamma compare
BWI76_RS27305 -2.2 -6.1 glycosyl transferase compare
BWI76_RS02610 -2.2 -3.8 transcriptional regulator compare
BWI76_RS01350 -2.2 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS27430 -2.2 -0.9 (p)ppGpp synthetase compare
BWI76_RS21570 -2.1 -2.3 RnfH family protein compare
BWI76_RS08385 -2.1 -2.5 citrate (Si)-synthase compare
BWI76_RS09660 -2.1 -1.4 DNA translocase FtsK compare
BWI76_RS26570 -2.1 -2.3 anion permease compare
BWI76_RS21580 -2.1 -1.5 SsrA-binding protein compare
BWI76_RS27275 -2.1 -5.2 hypothetical protein compare
BWI76_RS08725 -2.0 -3.7 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS07675 -2.0 -3.5 DeoR family transcriptional regulator compare
BWI76_RS16275 -2.0 -2.3 fumarate hydratase FumA compare
BWI76_RS01185 -2.0 -1.4 adenylate cyclase compare
BWI76_RS05235 -2.0 -0.9 hypothetical protein compare
BWI76_RS20650 -2.0 -1.3 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS00240 -2.0 -1.6 FMN-binding protein MioC compare
BWI76_RS03880 -2.0 -3.2 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS00140 -2.0 -0.8 phosphate transport system regulator PhoU compare
BWI76_RS08720 -1.9 -1.8 imidazolonepropionase compare
BWI76_RS20165 -1.9 -3.9 NADH-quinone oxidoreductase subunit G compare
BWI76_RS00720 -1.9 -2.7 DNA-binding response regulator compare
BWI76_RS05120 -1.9 -9.7 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS20150 -1.9 -1.5 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS26670 -1.9 -8.3 two-component sensor histidine kinase compare
BWI76_RS03415 -1.9 -4.9 LacI family transcriptional regulator compare
BWI76_RS09530 -1.9 -1.0 hypothetical protein compare
BWI76_RS27170 -1.9 -5.7 MltR family transcriptional regulator compare
BWI76_RS27280 -1.9 -7.0 polymerase compare
BWI76_RS18165 -1.9 -1.4 NUDIX pyrophosphatase compare
BWI76_RS24850 -1.9 -4.2 DeoR family transcriptional regulator compare
BWI76_RS27075 -1.8 -4.9 IclR family transcriptional regulator compare
BWI76_RS24100 -1.8 -2.8 YggS family pyridoxal phosphate enzyme compare
BWI76_RS00355 -1.8 -2.1 DNA polymerase I compare
BWI76_RS24275 -1.8 -2.9 biopolymer transport protein ExbD compare
BWI76_RS26190 -1.8 -5.7 glycerol-3-phosphate dehydrogenase compare
BWI76_RS04100 -1.8 -3.2 peptide chain release factor 3 compare
BWI76_RS26175 -1.8 -2.6 DeoR/GlpR family transcriptional regulator compare
BWI76_RS14075 -1.8 -1.4 TetR family transcriptional regulator compare
BWI76_RS12485 -1.8 -2.3 TyrR family transcriptional regulator compare
BWI76_RS09635 -1.8 -1.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS01110 -1.7 -3.9 TDP-fucosamine acetyltransferase compare
BWI76_RS19905 -1.7 -4.2 OmpK36 porin compare
BWI76_RS15230 -1.7 -3.8 4-hydroxythreonine-4-phosphate dehydrogenase compare
BWI76_RS20130 -1.7 -3.1 NADH-quinone oxidoreductase subunit N compare
BWI76_RS27475 -1.7 -6.9 regulatory protein GntR family protein compare
BWI76_RS21450 -1.7 -1.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS15840 -1.7 -1.6 prophage protein compare
BWI76_RS22240 -1.7 -4.0 transcriptional regulator compare
BWI76_RS14625 -1.7 -1.1 protein TolA compare
BWI76_RS19865 -1.6 -1.7 ecotin compare
BWI76_RS23885 -1.6 -1.2 2-octaprenylphenol hydroxylase compare
BWI76_RS25280 -1.6 -1.4 RNase adaptor protein RapZ compare
BWI76_RS01885 -1.6 -1.0 CsbD family protein compare
BWI76_RS20895 -1.6 -2.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS26440 -1.6 -1.1 hypothetical protein compare
BWI76_RS20970 -1.6 -1.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS19845 -1.6 -7.3 phosphatase compare
BWI76_RS17070 -1.6 -2.8 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS20270 -1.6 -4.7 hypothetical protein compare
BWI76_RS15860 -1.6 -1.7 adenine-specific DNA methyltransferase compare
BWI76_RS15835 -1.5 -1.1 hypothetical protein compare
BWI76_RS23690 -1.5 -1.5 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS26665 -1.5 -3.0 DNA-binding response regulator compare
BWI76_RS25480 -1.5 -2.0 ribonuclease E/G compare
BWI76_RS01125 -1.5 -3.9 4-alpha-L-fucosyltransferase compare
BWI76_RS08395 -1.5 -1.4 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS19085 -1.5 -9.0 protein-tyrosine-phosphatase compare
BWI76_RS11520 -1.5 -0.9 hypothetical protein compare
BWI76_RS24400 -1.5 -4.3 outer membrane channel protein TolC compare
BWI76_RS23875 -1.5 -4.3 glycine cleavage system protein H compare
BWI76_RS12420 -1.5 -0.9 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS12255 -1.5 -7.8 hypothetical protein compare
BWI76_RS07185 -1.5 -1.5 hypothetical protein compare
BWI76_RS00065 -1.5 -4.0 MurR/RpiR family transcriptional regulator compare
BWI76_RS19840 -1.5 -1.0 hypothetical protein compare
BWI76_RS06075 -1.5 -2.3 taurine transporter subunit compare
BWI76_RS14980 -1.5 -1.5 hypothetical protein compare
BWI76_RS19730 -1.5 -4.3 1-phosphofructokinase compare
BWI76_RS16955 -1.4 -0.9 hypothetical protein compare
BWI76_RS27385 -1.4 -1.5 orotate phosphoribosyltransferase compare
BWI76_RS03235 -1.4 -10.3 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS12275 -1.4 -5.6 hypothetical protein compare
BWI76_RS04645 -1.4 -3.4 3-dehydroquinase compare
BWI76_RS27290 -1.4 -5.3 hypothetical protein compare
BWI76_RS20190 -1.4 -3.8 NADH-quinone oxidoreductase subunit A compare
BWI76_RS19900 -1.4 -2.8 FAD:protein FMN transferase compare
BWI76_RS01205 -1.4 -2.1 DUF484 family protein compare
BWI76_RS17735 -1.4 -2.4 D-amino acid dehydrogenase small subunit compare
BWI76_RS23340 -1.3 -1.6 transcriptional regulator compare
BWI76_RS05200 -1.3 -0.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS16355 -1.3 -1.7 electron transport complex subunit A compare
BWI76_RS14435 -1.3 -1.1 glutamine ABC transporter ATP-binding protein compare
BWI76_RS02865 -1.3 -2.9 hypothetical protein compare
BWI76_RS15535 -1.3 -2.4 hypothetical protein compare
BWI76_RS21565 -1.3 -0.8 outer membrane protein assembly factor BamE compare
BWI76_RS25870 -1.3 -1.0 elongation factor Tu compare
BWI76_RS25245 -1.3 -1.7 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS06730 -1.3 -1.6 lac repressor compare
BWI76_RS23355 -1.3 -2.5 LacI family transcriptional regulator compare
BWI76_RS15830 -1.3 -1.7 hypothetical protein compare
BWI76_RS00345 -1.3 -1.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS19705 -1.3 -2.2 kinase compare
BWI76_RS15865 -1.3 -2.7 hypothetical protein compare
BWI76_RS26095 -1.3 -0.9 shikimate kinase compare
BWI76_RS05680 -1.3 -2.3 LacI family transcriptional regulator compare
BWI76_RS06830 -1.3 -2.7 recombination protein RecR compare
BWI76_RS21245 -1.2 -2.3 nitrogen regulatory protein P-II compare
BWI76_RS20995 -1.2 -2.2 RNA degradosome polyphosphate kinase compare
BWI76_RS27505 -1.2 -2.9 septal ring assembly protein ZapB compare
BWI76_RS12245 -1.2 -5.7 hypothetical protein compare
BWI76_RS11060 -1.2 -1.1 septum formation inhibitor Maf compare
BWI76_RS16315 -1.2 -0.9 SirA-like protein compare
BWI76_RS01135 -1.2 -3.1 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS24720 -1.2 -2.0 hypothetical protein compare
BWI76_RS11285 -1.2 -1.2 transcriptional regulator compare
BWI76_RS07070 -1.2 -2.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21100 -1.2 -1.8 nucleoside-diphosphate kinase compare
BWI76_RS22755 -1.2 -2.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS06290 -1.2 -1.3 ACP phosphodiesterase compare
BWI76_RS08495 -1.2 -2.2 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS02545 -1.2 -3.9 protease modulator HflK compare
BWI76_RS11690 -1.2 -3.2 succinylglutamate desuccinylase compare
BWI76_RS25630 -1.2 -2.1 hypothetical protein compare
BWI76_RS26940 -1.2 -5.5 transcriptional regulator compare
BWI76_RS24575 -1.2 -1.1 hypothetical protein compare
BWI76_RS12240 -1.2 -4.3 terminase small subunit compare
BWI76_RS12250 -1.2 -7.4 terminase compare
BWI76_RS08525 -1.2 -1.7 colicin transporter compare
BWI76_RS01840 -1.2 -2.3 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS01200 -1.2 -1.0 diaminopimelate epimerase compare
BWI76_RS17530 -1.2 -1.3 hypothetical protein compare
BWI76_RS25420 -1.1 -2.6 malate dehydrogenase compare
BWI76_RS01120 -1.1 -4.4 O-antigen translocase compare
BWI76_RS01090 -1.1 -2.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS19575 -1.1 -1.9 maleylacetoacetate isomerase compare


Specific Phenotypes

For 4 genes in this experiment