Experiment set32IT052 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -9.9 -5.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02995 -9.1 -8.8 aspartate carbamoyltransferase compare
BWI76_RS04470 -7.6 -8.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS23265 -7.5 -2.6 hypothetical protein compare
BWI76_RS15825 -7.3 -2.4 hypothetical protein compare
BWI76_RS19050 -6.7 -10.3 NAD(P)-dependent oxidoreductase compare
BWI76_RS01210 -6.5 -2.7 tyrosine recombinase XerC compare
BWI76_RS15225 -6.3 -4.1 DeoR family transcriptional regulator compare
BWI76_RS08395 -6.1 -1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS09645 -6.0 -1.5 thioredoxin-disulfide reductase compare
BWI76_RS10990 -5.9 -3.5 dihydroorotase compare
BWI76_RS19055 -5.8 -6.8 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS19040 -5.7 -4.0 hypothetical protein compare
BWI76_RS16360 -5.6 -1.4 electron transport complex subunit RsxB compare
BWI76_RS19060 -5.6 -14.2 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS00600 -5.2 -6.4 LacI family transcriptional regulator compare
BWI76_RS15110 -4.9 -10.1 putative excinuclease ABC subunit A compare
BWI76_RS23330 -4.9 -5.1 transcriptional regulator GalR compare
BWI76_RS19070 -4.9 -7.9 rhamnosyltransferase compare
BWI76_RS09910 -4.7 -14.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS01630 -4.6 -1.1 16S ribosomal RNA compare
BWI76_RS27385 -4.5 -6.9 orotate phosphoribosyltransferase compare
BWI76_RS20360 -4.3 -1.1 cell division protein DedD compare
BWI76_RS11430 -4.3 -1.1 lipoprotein compare
BWI76_RS21450 -4.2 -2.1 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS01350 -4.2 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS02530 -4.2 -2.2 tRNA dimethylallyltransferase compare
BWI76_RS20165 -4.1 -4.1 NADH-quinone oxidoreductase subunit G compare
BWI76_RS04510 -4.1 -1.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS24900 -4.1 -1.9 DeoR family transcriptional regulator compare
BWI76_RS26085 -4.1 -1.7 3-dehydroquinate synthase compare
BWI76_RS19010 -3.9 -2.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS02815 -3.9 -2.0 fructose-bisphosphatase class I compare
BWI76_RS09190 -3.8 -2.6 hypothetical protein compare
BWI76_RS19035 -3.8 -4.5 dTDP-rhamnosyl transferase compare
BWI76_RS19045 -3.8 -5.7 capsular polysaccharide biosynthesis protein compare
BWI76_RS08535 -3.8 -1.5 translocation protein TolB compare
BWI76_RS12090 -3.7 -2.3 HNH endonuclease compare
BWI76_RS26075 -3.7 -2.7 DNA adenine methylase compare
BWI76_RS19065 -3.6 -14.1 dTDP-glucose 4,6-dehydratase compare
BWI76_RS08425 -3.6 -3.7 succinyl-CoA ligase subunit beta compare
BWI76_RS08530 -3.6 -1.7 protein TolA compare
BWI76_RS09615 -3.5 -2.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS13915 -3.5 -7.2 magnesium transport protein MgtC compare
BWI76_RS15115 -3.5 -2.4 MFS transporter compare
BWI76_RS04705 -3.4 -5.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS09640 -3.4 -2.0 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS23885 -3.3 -1.1 2-octaprenylphenol hydroxylase compare
BWI76_RS21370 -3.3 -1.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS26095 -3.2 -1.1 shikimate kinase compare
BWI76_RS06340 -3.2 -1.1 hypothetical protein compare
BWI76_RS08405 -3.1 -2.8 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS11700 -3.1 -1.1 hypothetical protein compare
BWI76_RS20130 -3.0 -2.8 NADH-quinone oxidoreductase subunit N compare
BWI76_RS11520 -2.9 -1.0 hypothetical protein compare
BWI76_RS08275 -2.9 -1.3 LexA regulated protein compare
BWI76_RS27165 -2.8 -4.3 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS04100 -2.8 -2.9 peptide chain release factor 3 compare
BWI76_RS13400 -2.6 -2.9 GntR family transcriptional regulator compare
BWI76_RS08385 -2.6 -2.6 citrate (Si)-synthase compare
BWI76_RS15955 -2.6 -3.5 transcriptional regulator compare
BWI76_RS01200 -2.5 -1.4 diaminopimelate epimerase compare
BWI76_RS12170 -2.5 -4.1 hypothetical protein compare
BWI76_RS08525 -2.5 -2.3 colicin transporter compare
BWI76_RS24740 -2.4 -3.3 GntR family transcriptional regulator compare
BWI76_RS05015 -2.4 -1.8 transcriptional regulator compare
BWI76_RS13920 -2.4 -5.6 magnesium-translocating P-type ATPase compare
BWI76_RS20150 -2.4 -1.7 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS26775 -2.4 -4.0 endo-1,4-D-glucanase compare
BWI76_RS17190 -2.4 -1.8 TonB system transport protein TonB compare
BWI76_RS27430 -2.3 -0.8 (p)ppGpp synthetase compare
BWI76_RS05450 -2.3 -1.1 ribonuclease HI compare
BWI76_RS21340 -2.3 -1.8 SoxR reducing system protein RseC compare
BWI76_RS23240 -2.3 -1.6 exonuclease V subunit gamma compare
BWI76_RS01800 -2.3 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS03880 -2.3 -2.6 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS08750 -2.3 -1.1 kinase inhibitor compare
BWI76_RS11335 -2.2 -0.9 tautomerase compare
BWI76_RS23915 -2.2 -1.5 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS24280 -2.2 -2.9 biopolymer transporter ExbB compare
BWI76_RS19700 -2.2 -1.8 deoxyribonuclease IV compare
BWI76_RS27305 -2.2 -5.5 glycosyl transferase compare
BWI76_RS16485 -2.2 -1.1 ribonuclease T compare
BWI76_RS11965 -2.2 -2.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS19900 -2.2 -3.6 FAD:protein FMN transferase compare
BWI76_RS15835 -2.2 -1.8 hypothetical protein compare
BWI76_RS07675 -2.2 -4.1 DeoR family transcriptional regulator compare
BWI76_RS20140 -2.1 -3.0 NADH-quinone oxidoreductase subunit L compare
BWI76_RS00180 -2.1 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS11440 -2.1 -0.9 hypothetical protein compare
BWI76_RS25425 -2.1 -1.0 arginine repressor compare
BWI76_RS09660 -2.1 -1.1 DNA translocase FtsK compare
BWI76_RS23875 -2.1 -4.8 glycine cleavage system protein H compare
BWI76_RS21140 -2.1 -1.6 molecular chaperone HscA compare
BWI76_RS00140 -2.1 -0.7 phosphate transport system regulator PhoU compare
BWI76_RS01185 -2.1 -1.3 adenylate cyclase compare
BWI76_RS08205 -2.1 -3.3 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS01095 -2.1 -1.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS20650 -2.0 -1.1 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS11690 -2.0 -4.4 succinylglutamate desuccinylase compare
BWI76_RS19845 -2.0 -4.7 phosphatase compare
BWI76_RS08725 -2.0 -3.5 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS08495 -2.0 -2.5 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS21100 -2.0 -1.5 nucleoside-diphosphate kinase compare
BWI76_RS15840 -1.9 -1.9 prophage protein compare
BWI76_RS01385 -1.9 -1.6 potassium transporter compare
BWI76_RS08210 -1.9 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS12270 -1.9 -3.0 hypothetical protein compare
BWI76_RS14935 -1.9 -1.0 NIPSNAP family containing protein compare
BWI76_RS20180 -1.9 -2.2 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS10920 -1.9 -2.4 putative TetR family transcriptional regulator compare
BWI76_RS27440 -1.9 -3.2 DNA helicase RecG compare
BWI76_RS24340 -1.9 -5.7 two-component sensor histidine kinase compare
BWI76_RS13085 -1.8 -4.2 bifunctional oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase compare
BWI76_RS24275 -1.8 -2.3 biopolymer transport protein ExbD compare
BWI76_RS13390 -1.8 -2.7 ubiquinol oxidase subunit II compare
BWI76_RS20895 -1.8 -1.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS17735 -1.8 -2.9 D-amino acid dehydrogenase small subunit compare
BWI76_RS18240 -1.8 -1.4 L-arabinose ABC transporter permease AraH compare
BWI76_RS24850 -1.8 -3.5 DeoR family transcriptional regulator compare
BWI76_RS02610 -1.8 -2.7 transcriptional regulator compare
BWI76_RS20050 -1.8 -1.0 hypothetical protein compare
BWI76_RS09635 -1.8 -0.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS00065 -1.7 -3.0 MurR/RpiR family transcriptional regulator compare
BWI76_RS15740 -1.7 -2.5 HNH endonuclease compare
BWI76_RS01090 -1.7 -3.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS20135 -1.7 -1.9 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20160 -1.7 -1.4 NADH-quinone oxidoreductase subunit H compare
BWI76_RS03080 -1.7 -2.5 (Fe-S)-cluster assembly protein compare
BWI76_RS00240 -1.7 -1.3 FMN-binding protein MioC compare
BWI76_RS12285 -1.7 -1.8 hypothetical protein compare
BWI76_RS05680 -1.7 -2.3 LacI family transcriptional regulator compare
BWI76_RS23520 -1.7 -1.1 hypothetical protein compare
BWI76_RS01205 -1.7 -2.0 DUF484 family protein compare
BWI76_RS08370 -1.7 -2.5 membrane protein compare
BWI76_RS14320 -1.7 -1.9 hypothetical protein compare
BWI76_RS26665 -1.7 -2.4 DNA-binding response regulator compare
BWI76_RS24100 -1.7 -2.3 YggS family pyridoxal phosphate enzyme compare
BWI76_RS14650 -1.6 -2.8 helix-turn-helix transcriptional regulator compare
BWI76_RS19515 -1.6 -2.7 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) compare
BWI76_RS04145 -1.6 -2.4 purine-nucleoside phosphorylase compare
BWI76_RS12420 -1.6 -0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS26175 -1.6 -3.2 DeoR/GlpR family transcriptional regulator compare
BWI76_RS20190 -1.6 -2.2 NADH-quinone oxidoreductase subunit A compare
BWI76_RS16955 -1.6 -0.8 hypothetical protein compare
BWI76_RS27075 -1.6 -4.0 IclR family transcriptional regulator compare
BWI76_RS08390 -1.6 -1.9 hypothetical protein compare
BWI76_RS05120 -1.6 -6.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS03515 -1.6 -3.0 hypothetical protein compare
BWI76_RS27350 -1.6 -2.5 hypothetical protein compare
BWI76_RS14505 -1.6 -1.7 salicylate synthase Irp9 compare
BWI76_RS27475 -1.5 -4.4 regulatory protein GntR family protein compare
BWI76_RS02580 -1.5 -1.0 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS01120 -1.5 -2.7 O-antigen translocase compare
BWI76_RS13250 -1.5 -0.9 cytochrome b561 compare
BWI76_RS01110 -1.5 -2.8 TDP-fucosamine acetyltransferase compare
BWI76_RS06485 -1.5 -1.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS12275 -1.5 -6.6 hypothetical protein compare
BWI76_RS11895 -1.5 -1.7 AraC family transcriptional regulator compare
BWI76_RS14075 -1.5 -0.9 TetR family transcriptional regulator compare
BWI76_RS03105 -1.5 -0.7 myo-inosose-2 dehydratase compare
BWI76_RS13595 -1.5 -2.7 transcriptional regulator compare
BWI76_RS15230 -1.5 -4.3 4-hydroxythreonine-4-phosphate dehydrogenase compare
BWI76_RS26190 -1.5 -4.0 glycerol-3-phosphate dehydrogenase compare
BWI76_RS26670 -1.5 -4.8 two-component sensor histidine kinase compare
BWI76_RS22755 -1.4 -2.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01840 -1.4 -2.1 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS12260 -1.4 -3.5 hypothetical protein compare
BWI76_RS01325 -1.4 -1.4 twin-arginine translocase subunit TatB compare
BWI76_RS04655 -1.4 -2.0 shikimate dehydrogenase compare
BWI76_RS23830 -1.4 -2.9 hypothetical protein compare
BWI76_RS11190 -1.4 -1.3 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS25960 -1.4 -2.0 NUDIX hydrolase compare
BWI76_RS13395 -1.4 -3.0 cytochrome D ubiquinol oxidase subunit I compare
BWI76_RS23305 -1.4 -2.1 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS27830 -1.4 -2.1 type I toxin-antitoxin system toxin TisB compare
BWI76_RS18110 -1.4 -3.1 transcriptional regulator HexR compare
BWI76_RS27275 -1.4 -4.8 hypothetical protein compare
BWI76_RS13685 -1.4 -1.4 IclR family transcriptional regulator compare
BWI76_RS01135 -1.4 -3.0 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS26940 -1.4 -4.0 transcriptional regulator compare
BWI76_RS17820 -1.4 -1.6 hypothetical protein compare
BWI76_RS12255 -1.4 -5.8 hypothetical protein compare
BWI76_RS13820 -1.4 -1.4 hypothetical protein compare
BWI76_RS01220 -1.4 -2.2 DNA-dependent helicase II compare
BWI76_RS12245 -1.4 -5.1 hypothetical protein compare
BWI76_RS13575 -1.3 -1.4 sugar binding transcriptional regulator, LacI family protein compare
BWI76_RS10500 -1.3 -1.1 flavoprotein monooxygenase compare
BWI76_RS22620 -1.3 -1.6 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS08345 -1.3 -1.7 Nif3-like dinuclear metal center protein compare
BWI76_RS06535 -1.3 -2.4 endopeptidase La compare
BWI76_RS05005 -1.3 -1.3 polynucleotide adenylyltransferase compare
BWI76_RS02545 -1.3 -3.0 protease modulator HflK compare
BWI76_RS23230 -1.3 -0.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS12185 -1.3 -1.5 hypothetical protein compare
BWI76_RS19090 -1.3 -5.6 polysaccharide export protein Wza compare
BWI76_RS04525 -1.3 -1.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS08615 -1.3 -2.4 galactokinase compare
BWI76_RS08430 -1.3 -2.2 succinate--CoA ligase subunit alpha compare
BWI76_RS11450 -1.3 -3.8 cyanate MFS transporter compare


Specific Phenotypes

For 3 genes in this experiment