Experiment set32IT052 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS06980 +5.0 28.4 ureidoglycolate lyase compare
BWI76_RS22650 +4.3 2.9 lipoprotein NlpD compare
BWI76_RS06530 +3.6 18.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS07780 +3.4 6.6 hypothetical protein compare
BWI76_RS06525 +3.4 13.4 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS12925 +3.0 1.4 efflux transporter periplasmic adaptor subunit compare
BWI76_RS17665 +3.0 1.6 proteasome-type protease compare
BWI76_RS19575 +2.7 1.1 maleylacetoacetate isomerase compare
BWI76_RS08655 +2.6 1.8 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS27395 +2.4 2.0 hypothetical protein compare
BWI76_RS23055 +2.4 1.3 cobalamin biosynthesis protein CbiG compare
BWI76_RS20380 +2.4 2.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS23895 +2.3 2.4 Xaa-Pro aminopeptidase compare
BWI76_RS08215 +2.3 1.0 glucosamine-6-phosphate deaminase compare
BWI76_RS04900 +2.3 1.7 DUF2950 domain-containing protein compare
BWI76_RS27950 +2.3 1.3 transcriptional regulator compare
BWI76_RS17785 +2.3 2.0 septum site-determining protein MinD compare
BWI76_RS16425 +2.1 2.3 hypothetical protein compare
BWI76_RS27505 +2.0 1.2 septal ring assembly protein ZapB compare
BWI76_RS14390 +2.0 2.2 hypothetical protein compare
BWI76_RS07165 +2.0 1.4 hypothetical protein compare
BWI76_RS22640 +2.0 1.2 hypothetical protein compare
BWI76_RS18385 +2.0 2.4 hypothetical protein compare
BWI76_RS24035 +1.9 2.0 hypothetical protein compare
BWI76_RS26515 +1.9 1.2 nickel import ATP-binding protein NikD compare
BWI76_RS18470 +1.9 1.4 hypothetical protein compare
BWI76_RS20970 +1.9 3.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS10560 +1.8 2.0 gamma-glutamyltransferase compare
BWI76_RS16080 +1.8 1.3 LysR family transcriptional regulator compare
BWI76_RS06540 +1.8 1.5 DNA-binding protein HU-beta compare
BWI76_RS09630 +1.8 2.2 leucyl/phenylalanyl-tRNA--protein transferase compare
BWI76_RS01585 +1.8 3.7 transcriptional regulator compare
BWI76_RS23610 +1.8 1.8 multidrug transporter subunit MdtN compare
BWI76_RS26130 +1.7 3.5 ADP compounds hydrolase NudE compare
BWI76_RS03665 +1.7 1.5 ABC transporter ATP-binding protein compare
BWI76_RS19480 +1.7 4.8 transcriptional regulator compare
BWI76_RS00715 +1.7 2.8 two-component sensor histidine kinase compare
BWI76_RS03195 +1.7 1.1 P4 phage protein compare
BWI76_RS11040 +1.7 1.3 ribonuclease E compare
BWI76_RS09530 +1.7 2.0 hypothetical protein compare
BWI76_RS23515 +1.7 5.2 antibiotic biosynthesis monooxygenase compare
BWI76_RS13855 +1.6 1.1 peroxiredoxin compare
BWI76_RS11935 +1.6 1.6 YmiA family putative membrane protein compare
BWI76_RS27875 +1.5 1.4 membrane protein compare
BWI76_RS20795 +1.5 1.6 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS27780 +1.5 2.3 hypothetical protein compare
BWI76_RS17525 +1.5 3.1 XshC-Cox1-family protein compare
BWI76_RS22910 +1.5 1.9 flap endonuclease Xni compare
BWI76_RS08760 +1.5 1.2 biotin synthase compare
BWI76_RS17975 +1.4 4.2 tail-specific protease compare
BWI76_RS13785 +1.4 1.6 ABC transporter permease compare
BWI76_RS11395 +1.4 1.8 RNA polymerase sigma factor FecI compare
BWI76_RS16555 +1.4 2.0 hypothetical protein compare
BWI76_RS09535 +1.4 1.3 N-acetylmuramoyl-L-alanine amidase amid compare
BWI76_RS03175 +1.4 1.2 hypothetical protein compare
BWI76_RS23905 +1.4 1.5 Z-ring-associated protein compare
BWI76_RS20565 +1.4 2.1 hypothetical protein compare
BWI76_RS18755 +1.4 1.8 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS12085 +1.4 1.4 regulatory protein CII from bacteriophage origin compare
BWI76_RS11060 +1.3 2.3 septum formation inhibitor Maf compare
BWI76_RS13225 +1.3 1.2 hypothetical protein compare
BWI76_RS05570 +1.3 1.3 hypothetical protein compare
BWI76_RS07075 +1.3 1.0 hypothetical protein compare
BWI76_RS01665 +1.3 1.6 Isocitrate lyase (EC 4.1.3.1) (from data) compare
BWI76_RS21165 +1.3 2.2 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS24180 +1.3 2.5 hypothetical protein compare
BWI76_RS06130 +1.3 1.8 extensin family protein compare
BWI76_RS21810 +1.3 1.2 universal stress protein compare
BWI76_RS07690 +1.3 1.3 enterochelin synthetase component D compare
BWI76_RS24950 +1.3 0.9 hypothetical protein compare
BWI76_RS10760 +1.3 1.5 nitroreductase family protein compare
BWI76_RS09960 +1.3 2.5 Lon protease compare
BWI76_RS21495 +1.3 3.8 outer membrane lipoprotein compare
BWI76_RS14225 +1.3 1.5 anti-ECF sigma factor ChrR compare
BWI76_RS00110 +1.3 1.1 adenine permease PurP compare
BWI76_RS17210 +1.2 1.1 dsDNA-mimic protein compare
BWI76_RS20020 +1.2 1.3 nucleoside triphosphatase NudI compare
BWI76_RS18740 +1.2 1.8 HPP family protein compare
BWI76_RS01235 +1.2 2.3 hypothetical protein compare
BWI76_RS13715 +1.2 2.8 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS17325 +1.2 2.0 nitrate reductase molybdenum cofactor assembly chaperone compare
BWI76_RS13745 +1.2 1.9 formate dehydrogenase subunit beta compare
BWI76_RS08825 +1.2 2.9 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS18575 +1.2 1.2 transcriptional regulator compare
BWI76_RS22310 +1.2 1.1 hydrogenase 3 small subunit compare
BWI76_RS00400 +1.2 0.6 glutamine synthetase compare
BWI76_RS01010 +1.2 1.2 uridine phosphorylase compare
BWI76_RS23460 +1.2 1.0 hypothetical protein compare
BWI76_RS26910 +1.2 1.1 hypothetical protein compare
BWI76_RS23580 +1.2 2.1 hypothetical protein compare
BWI76_RS08585 +1.2 1.7 nicotinamide riboside transporter PnuC compare
BWI76_RS12565 +1.2 1.3 SAM-dependent methyltransferase compare
BWI76_RS26410 +1.1 1.9 membrane protein compare
BWI76_RS25545 +1.1 1.1 hypothetical protein compare
BWI76_RS05160 +1.1 2.2 hypothetical protein compare
BWI76_RS06120 +1.1 1.5 membrane protein compare
BWI76_RS24665 +1.1 1.1 LsrR family transcriptional regulator compare
BWI76_RS16645 +1.1 1.5 DeoR family transcriptional regulator compare
BWI76_RS05555 +1.1 2.9 Crl family RNA polymerase assembly factor compare
BWI76_RS09155 +1.1 2.2 undecaprenyl-diphosphatase compare
BWI76_RS21710 +1.1 3.1 nitroreductase compare
BWI76_RS21995 +1.1 1.0 transcriptional regulator compare
BWI76_RS14065 +1.1 1.1 hypothetical protein compare
BWI76_RS14835 +1.1 0.9 hypothetical protein compare
BWI76_RS16365 +1.1 1.5 electron transport complex subunit RsxC compare
BWI76_RS03630 +1.1 0.8 LysR family transcriptional regulator compare
BWI76_RS16490 +1.1 2.0 glutaredoxin compare
BWI76_RS10845 +1.1 1.7 DNA-binding response regulator compare
BWI76_RS21075 +1.1 1.0 membrane protein compare
BWI76_RS23950 +1.1 1.8 succinate CoA transferase compare
BWI76_RS22130 +1.1 2.4 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS13850 +1.1 1.8 N-acetyltransferase compare
BWI76_RS16895 +1.1 0.9 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS24730 +1.1 1.2 uronate isomerase compare
BWI76_RS13485 +1.1 1.2 NADP-dependent oxidoreductase compare
BWI76_RS11470 +1.1 2.2 sensor domain-containing diguanylate cyclase compare
BWI76_RS07950 +1.1 1.1 universal stress protein G compare
BWI76_RS11750 +1.1 2.5 chitooligosaccharide deacetylase compare
BWI76_RS19580 +1.0 2.3 FAA-hydrolase compare
BWI76_RS05235 +1.0 0.8 hypothetical protein compare
BWI76_RS05140 +1.0 0.9 Fe3+-hydroxamate ABC transporter permease FhuB compare
BWI76_RS17875 +1.0 1.0 L-serine ammonia-lyase compare
BWI76_RS16830 +1.0 0.8 ABC transporter compare
BWI76_RS19495 +1.0 1.0 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS03970 +1.0 1.4 PTS mannose/fructose/sorbose family transporter subunit IID compare
BWI76_RS13635 +1.0 0.8 extracellular solute-binding protein compare
BWI76_RS18445 +1.0 2.9 glycosyltransferase compare
BWI76_RS04320 +1.0 1.6 transcriptional activator NhaR compare
BWI76_RS25285 +1.0 1.0 HPr family phosphocarrier protein compare
BWI76_RS15730 +1.0 2.8 hypothetical protein compare
BWI76_RS20940 +1.0 1.7 uracil/xanthine transporter compare
BWI76_RS26855 +1.0 2.2 cellulose synthase operon protein YhjQ compare
BWI76_RS23370 +1.0 1.4 aspartate/glutamate racemase compare
BWI76_RS04965 +1.0 1.6 ABC transporter ATP-binding protein compare
BWI76_RS09850 +1.0 2.0 L,D-transpeptidase compare
BWI76_RS11695 +1.0 1.6 ATP-independent periplasmic protein-refolding chaperone compare
BWI76_RS09075 +1.0 2.2 pyruvate formate lyase-activating protein compare
BWI76_RS10890 +1.0 2.5 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS13275 +1.0 1.7 hypothetical protein compare
BWI76_RS18390 +1.0 2.2 hypothetical protein compare
BWI76_RS06810 +1.0 1.7 hypothetical protein compare
BWI76_RS06805 +1.0 2.1 primosomal replication protein N'' compare
BWI76_RS10505 +1.0 0.9 putative guanine/xanthin permease compare
BWI76_RS02690 +1.0 2.0 hypothetical protein compare
BWI76_RS22980 +1.0 3.7 murein transglycosylase A compare
BWI76_RS27900 +1.0 2.2 DNA damage-inducible protein D compare
BWI76_RS17180 +1.0 2.3 hypothetical protein compare
BWI76_RS02270 +1.0 1.5 DSBA oxidoreductase compare
BWI76_RS21675 +1.0 1.4 hypothetical protein compare
BWI76_RS10805 +1.0 2.2 hypothetical protein compare
BWI76_RS00795 +1.0 2.5 carboxymuconolactone decarboxylase compare
BWI76_RS19325 +1.0 1.5 mandelate racemase compare
BWI76_RS20720 +1.0 1.2 hypothetical protein compare
BWI76_RS01515 +0.9 1.2 PTS family cellobiose transporter subunit IIA compare
BWI76_RS00025 +0.9 0.9 hypothetical protein compare
BWI76_RS02855 +0.9 1.4 cytochrome B562 compare
BWI76_RS09310 +0.9 2.4 hypothetical protein compare
BWI76_RS24250 +0.9 1.4 hypothetical protein compare
BWI76_RS26865 +0.9 2.2 dipeptide ABC transporter ATP-binding protein compare
BWI76_RS09025 +0.9 0.7 GntR family transcriptional regulator compare
BWI76_RS04260 +0.9 1.8 peroxide stress protein YaaA compare
BWI76_RS05070 +0.9 1.3 type II secretion system protein GspH compare
BWI76_RS10620 +0.9 2.1 hypothetical protein compare
BWI76_RS13545 +0.9 1.1 N-acetyltransferase compare
BWI76_RS02605 +0.9 1.3 esterase compare
BWI76_RS23945 +0.9 2.5 methylmalonyl-CoA decarboxylase compare
BWI76_RS18075 +0.9 1.3 oligopeptidase B compare
BWI76_RS02420 +0.9 1.1 entericidin EcnAB compare
BWI76_RS01850 +0.9 1.3 maltose operon protein MalM compare
BWI76_RS21375 +0.9 1.2 autonomous glycyl radical cofactor GrcA compare
BWI76_RS10635 +0.9 2.9 GGDEF domain-containing protein compare
BWI76_RS19215 +0.9 1.2 proline-specific peptidase compare
BWI76_RS23320 +0.9 1.2 hypothetical protein compare
BWI76_RS09470 +0.9 2.3 putrescine ABC transporter permease compare
BWI76_RS22420 +0.9 0.7 LacI family transcriptional regulator compare
BWI76_RS27940 +0.9 1.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS03890 +0.9 2.3 hypothetical protein compare
BWI76_RS15890 +0.9 1.0 Zn-dependent oxidoreductase compare
BWI76_RS03005 +0.9 1.3 hypothetical protein compare
BWI76_RS27500 +0.9 2.5 sulfate transporter subunit compare
BWI76_RS10585 +0.9 2.4 amino acid ABC transporter ATP-binding protein compare
BWI76_RS02090 +0.9 1.5 membrane protein compare
BWI76_RS03835 +0.9 1.5 4-hydroxyphenylacetate catabolism regulatory protein HpaA compare
BWI76_RS22960 +0.9 1.2 YgdI/YgdR family lipoprotein compare
BWI76_RS16030 +0.9 2.7 malonate decarboxylase acyl carrier protein compare
BWI76_RS11775 +0.9 1.7 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS13135 +0.9 0.9 3-oxoadipyl-CoA thiolase compare
BWI76_RS17980 +0.9 2.9 RNA chaperone ProQ compare
BWI76_RS04165 +0.9 2.8 DNA repair protein RadA compare
BWI76_RS08975 +0.9 1.6 amino acid ABC transporter substrate-binding protein compare
BWI76_RS11390 +0.9 1.2 iron dicitrate transport regulator FecR compare
BWI76_RS14030 +0.9 0.6 ABC transporter permease compare
BWI76_RS09915 +0.9 1.2 cell division protein ZapC compare
BWI76_RS15045 +0.8 1.7 LysR family transcriptional regulator compare
BWI76_RS14975 +0.8 1.0 glyoxalase-like domain protein compare
BWI76_RS22815 +0.8 2.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12895 +0.8 2.4 hypothetical protein compare
BWI76_RS24170 +0.8 1.4 nucleoside permease compare
BWI76_RS15215 +0.8 0.7 N-acetyltransferase compare
BWI76_RS22365 +0.8 2.6 hydrogenase expression/formation protein HypE compare


Specific Phenotypes

For 3 genes in this experiment