Experiment set32IT042 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -9.8 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS19050 -7.6 -5.2 NAD(P)-dependent oxidoreductase compare
BWI76_RS23265 -7.4 -2.9 hypothetical protein compare
BWI76_RS04470 -7.3 -10.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS02995 -6.9 -7.9 aspartate carbamoyltransferase compare
BWI76_RS09645 -6.0 -1.7 thioredoxin-disulfide reductase compare
BWI76_RS19055 -6.0 -10.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS17190 -6.0 -2.8 TonB system transport protein TonB compare
BWI76_RS00600 -5.7 -8.5 LacI family transcriptional regulator compare
BWI76_RS19040 -5.6 -3.9 hypothetical protein compare
BWI76_RS23330 -5.5 -5.7 transcriptional regulator GalR compare
BWI76_RS02815 -5.4 -2.6 fructose-bisphosphatase class I compare
BWI76_RS19045 -5.0 -8.2 capsular polysaccharide biosynthesis protein compare
BWI76_RS27385 -5.0 -8.5 orotate phosphoribosyltransferase compare
BWI76_RS15225 -5.0 -3.5 DeoR family transcriptional regulator compare
BWI76_RS19060 -5.0 -13.0 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS10990 -4.9 -4.4 dihydroorotase compare
BWI76_RS15110 -4.8 -11.1 putative excinuclease ABC subunit A compare
BWI76_RS01210 -4.6 -2.6 tyrosine recombinase XerC compare
BWI76_RS09910 -4.6 -15.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS19070 -4.6 -8.2 rhamnosyltransferase compare
BWI76_RS00025 -4.5 -1.3 hypothetical protein compare
BWI76_RS26620 -4.3 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS08395 -4.2 -1.6 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS02530 -4.1 -2.5 tRNA dimethylallyltransferase compare
BWI76_RS07185 -4.0 -2.5 hypothetical protein compare
BWI76_RS04510 -4.0 -1.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS08525 -4.0 -1.7 colicin transporter compare
BWI76_RS13915 -3.9 -8.2 magnesium transport protein MgtC compare
BWI76_RS25600 -3.9 -1.1 tRNA-Thr compare
BWI76_RS00140 -3.8 -1.1 phosphate transport system regulator PhoU compare
BWI76_RS19010 -3.8 -2.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS08210 -3.8 -1.5 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26075 -3.7 -4.2 DNA adenine methylase compare
BWI76_RS12090 -3.7 -2.6 HNH endonuclease compare
BWI76_RS08720 -3.7 -2.3 imidazolonepropionase compare
BWI76_RS19035 -3.6 -4.9 dTDP-rhamnosyl transferase compare
BWI76_RS08425 -3.6 -3.7 succinyl-CoA ligase subunit beta compare
BWI76_RS13920 -3.6 -6.8 magnesium-translocating P-type ATPase compare
BWI76_RS19065 -3.6 -16.8 dTDP-glucose 4,6-dehydratase compare
BWI76_RS12235 -3.6 -1.6 hypothetical protein compare
BWI76_RS20150 -3.5 -2.3 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS09640 -3.4 -2.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS17720 -3.3 -0.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS12170 -3.3 -5.7 hypothetical protein compare
BWI76_RS01385 -3.2 -2.1 potassium transporter compare
BWI76_RS23885 -3.2 -1.2 2-octaprenylphenol hydroxylase compare
BWI76_RS04705 -3.1 -5.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS08405 -3.1 -2.3 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS00240 -3.1 -1.9 FMN-binding protein MioC compare
BWI76_RS12145 -3.0 -2.1 hypothetical protein compare
BWI76_RS08430 -2.9 -5.2 succinate--CoA ligase subunit alpha compare
BWI76_RS21100 -2.9 -2.5 nucleoside-diphosphate kinase compare
BWI76_RS01325 -2.9 -2.2 twin-arginine translocase subunit TatB compare
BWI76_RS08495 -2.8 -4.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS08535 -2.7 -1.8 translocation protein TolB compare
BWI76_RS21565 -2.7 -1.1 outer membrane protein assembly factor BamE compare
BWI76_RS24900 -2.6 -1.9 DeoR family transcriptional regulator compare
BWI76_RS27390 -2.6 -5.6 ribonuclease PH compare
BWI76_RS21140 -2.6 -2.0 molecular chaperone HscA compare
BWI76_RS15115 -2.5 -4.2 MFS transporter compare
BWI76_RS20130 -2.5 -5.3 NADH-quinone oxidoreductase subunit N compare
BWI76_RS15825 -2.4 -1.4 hypothetical protein compare
BWI76_RS04100 -2.4 -3.2 peptide chain release factor 3 compare
BWI76_RS08500 -2.4 -1.9 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS16360 -2.4 -1.3 electron transport complex subunit RsxB compare
BWI76_RS11580 -2.4 -1.5 L-asparaginase 1 compare
BWI76_RS20180 -2.3 -3.9 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS02610 -2.3 -3.8 transcriptional regulator compare
BWI76_RS27165 -2.2 -5.0 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS09190 -2.2 -3.7 hypothetical protein compare
BWI76_RS23240 -2.2 -1.5 exonuclease V subunit gamma compare
BWI76_RS08205 -2.2 -3.7 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS24850 -2.2 -6.5 DeoR family transcriptional regulator compare
BWI76_RS23830 -2.2 -5.5 hypothetical protein compare
BWI76_RS20135 -2.2 -2.3 NADH-quinone oxidoreductase subunit M compare
BWI76_RS26570 -2.2 -2.6 anion permease compare
BWI76_RS15850 -2.1 -0.8 DUF1317 domain-containing protein compare
BWI76_RS00065 -2.1 -4.7 MurR/RpiR family transcriptional regulator compare
BWI76_RS27305 -2.1 -5.3 glycosyl transferase compare
BWI76_RS09660 -2.1 -1.3 DNA translocase FtsK compare
BWI76_RS22420 -2.0 -1.9 LacI family transcriptional regulator compare
BWI76_RS08390 -2.0 -3.1 hypothetical protein compare
BWI76_RS12270 -2.0 -2.6 hypothetical protein compare
BWI76_RS20650 -2.0 -1.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS23320 -2.0 -1.2 hypothetical protein compare
BWI76_RS26405 -1.9 -1.1 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS01185 -1.9 -1.3 adenylate cyclase compare
BWI76_RS15840 -1.9 -1.8 prophage protein compare
BWI76_RS20165 -1.9 -3.3 NADH-quinone oxidoreductase subunit G compare
BWI76_RS18165 -1.9 -1.3 NUDIX pyrophosphatase compare
BWI76_RS04515 -1.8 -1.0 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS07725 -1.8 -1.1 iron-enterobactin transporter permease compare
BWI76_RS24275 -1.8 -2.7 biopolymer transport protein ExbD compare
BWI76_RS18755 -1.8 -1.0 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS02180 -1.8 -1.0 hypothetical protein compare
BWI76_RS15290 -1.8 -1.1 transcriptional regulator compare
BWI76_RS06405 -1.7 -1.9 2-dehydropantoate 2-reductase compare
BWI76_RS23915 -1.7 -1.6 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS20170 -1.7 -2.8 NADH-quinone oxidoreductase subunit F compare
BWI76_RS19845 -1.7 -8.0 phosphatase compare
BWI76_RS27170 -1.7 -6.7 MltR family transcriptional regulator compare
BWI76_RS20140 -1.6 -3.7 NADH-quinone oxidoreductase subunit L compare
BWI76_RS26665 -1.6 -3.6 DNA-binding response regulator compare
BWI76_RS08530 -1.6 -1.1 protein TolA compare
BWI76_RS09615 -1.6 -1.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS03415 -1.6 -3.1 LacI family transcriptional regulator compare
BWI76_RS18770 -1.6 -0.8 DNA gyrase inhibitor compare
BWI76_RS23875 -1.6 -3.1 glycine cleavage system protein H compare
BWI76_RS27280 -1.6 -4.7 polymerase compare
BWI76_RS08110 -1.6 -1.8 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS05680 -1.6 -2.7 LacI family transcriptional regulator compare
BWI76_RS26670 -1.6 -6.9 two-component sensor histidine kinase compare
BWI76_RS12255 -1.6 -7.7 hypothetical protein compare
BWI76_RS07465 -1.6 -1.2 TetR family transcriptional regulator compare
BWI76_RS10305 -1.5 -5.8 transposase compare
BWI76_RS05120 -1.5 -7.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS25280 -1.5 -1.3 RNase adaptor protein RapZ compare
BWI76_RS11775 -1.5 -1.7 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS08385 -1.5 -1.4 citrate (Si)-synthase compare
BWI76_RS17070 -1.5 -2.1 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS01205 -1.5 -2.0 DUF484 family protein compare
BWI76_RS11285 -1.5 -1.3 transcriptional regulator compare
BWI76_RS01350 -1.5 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS12070 -1.5 -0.9 hypothetical protein compare
BWI76_RS22240 -1.5 -4.0 transcriptional regulator compare
BWI76_RS20190 -1.5 -3.0 NADH-quinone oxidoreductase subunit A compare
BWI76_RS07740 -1.5 -1.2 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS07435 -1.4 -2.8 LacI family transcriptional regulator compare
BWI76_RS26175 -1.4 -2.5 DeoR/GlpR family transcriptional regulator compare
BWI76_RS27290 -1.4 -4.5 hypothetical protein compare
BWI76_RS09960 -1.4 -1.7 Lon protease compare
BWI76_RS11810 -1.4 -1.5 outer membrane protein OmpW compare
BWI76_RS01170 -1.4 -2.3 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS24500 -1.4 -1.5 urease subunit gamma compare
BWI76_RS12195 -1.4 -3.1 hypothetical protein compare
BWI76_RS01615 -1.4 -3.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS13575 -1.4 -3.0 sugar binding transcriptional regulator, LacI family protein compare
BWI76_RS24740 -1.4 -3.1 GntR family transcriptional regulator compare
BWI76_RS19090 -1.4 -6.0 polysaccharide export protein Wza compare
BWI76_RS23880 -1.4 -2.2 Aminomethyltransferase (EC 2.1.2.10) (from data) compare
BWI76_RS03105 -1.4 -0.8 myo-inosose-2 dehydratase compare
BWI76_RS25220 -1.4 -1.6 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS04645 -1.4 -2.8 3-dehydroquinase compare
BWI76_RS27075 -1.4 -3.8 IclR family transcriptional regulator compare
BWI76_RS04270 -1.3 -1.9 transaldolase compare
BWI76_RS01580 -1.3 -3.0 hypothetical protein compare
BWI76_RS03235 -1.3 -8.7 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS15535 -1.3 -1.6 hypothetical protein compare
BWI76_RS11690 -1.3 -3.2 succinylglutamate desuccinylase compare
BWI76_RS02970 -1.3 -5.3 trehalose operon repressor compare
BWI76_RS27275 -1.3 -4.1 hypothetical protein compare
BWI76_RS16375 -1.3 -2.1 electron transport complex subunit G compare
BWI76_RS15955 -1.3 -3.3 transcriptional regulator compare
BWI76_RS16260 -1.3 -1.2 two-component sensor histidine kinase compare
BWI76_RS19905 -1.3 -3.1 OmpK36 porin compare
BWI76_RS25425 -1.3 -1.0 arginine repressor compare
BWI76_RS15835 -1.3 -1.1 hypothetical protein compare
BWI76_RS22855 -1.3 -2.6 hypothetical protein compare
BWI76_RS03080 -1.3 -1.7 (Fe-S)-cluster assembly protein compare
BWI76_RS12245 -1.2 -7.2 hypothetical protein compare
BWI76_RS27475 -1.2 -4.9 regulatory protein GntR family protein compare
BWI76_RS11155 -1.2 -1.8 penicillin-binding protein activator LpoB compare
BWI76_RS20640 -1.2 -3.3 cysteine synthase A compare
BWI76_RS01220 -1.2 -3.2 DNA-dependent helicase II compare
BWI76_RS23230 -1.2 -0.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS27440 -1.2 -2.1 DNA helicase RecG compare
BWI76_RS24635 -1.2 -3.1 autoinducer-2 (AI-2) modifying protein LsrG compare
BWI76_RS20965 -1.2 -1.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS08275 -1.2 -0.8 LexA regulated protein compare
BWI76_RS01800 -1.2 -2.3 glucose-6-phosphate isomerase compare
BWI76_RS15860 -1.2 -1.1 adenine-specific DNA methyltransferase compare
BWI76_RS13895 -1.2 -1.9 LysR family transcriptional regulator compare
BWI76_RS11410 -1.2 -1.1 leucine efflux protein compare
BWI76_RS15200 -1.2 -2.0 glutaminase compare
BWI76_RS21370 -1.2 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS18110 -1.2 -3.2 transcriptional regulator HexR compare
BWI76_RS22690 -1.2 -2.2 adenylyl-sulfate kinase compare
BWI76_RS24715 -1.2 -2.3 serine/threonine transporter SstT compare
BWI76_RS25355 -1.2 -3.7 cell division protein ZapE compare
BWI76_RS14075 -1.2 -1.1 TetR family transcriptional regulator compare
BWI76_RS15830 -1.2 -1.5 hypothetical protein compare
BWI76_RS12160 -1.2 -2.7 hypothetical protein compare
BWI76_RS15195 -1.2 -1.0 DUF4186 domain-containing protein compare
BWI76_RS22185 -1.2 -1.4 hypothetical protein compare
BWI76_RS12250 -1.2 -6.0 terminase compare
BWI76_RS20360 -1.1 -0.6 cell division protein DedD compare
BWI76_RS07675 -1.1 -2.7 DeoR family transcriptional regulator compare
BWI76_RS04530 -1.1 -0.7 peptidylprolyl isomerase SurA compare
BWI76_RS01200 -1.1 -1.0 diaminopimelate epimerase compare
BWI76_RS02550 -1.1 -4.6 protease modulator HflC compare
BWI76_RS02940 -1.1 -3.5 RpiR family transcriptional regulator compare
BWI76_RS26425 -1.1 -5.5 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS19375 -1.1 -0.9 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS08725 -1.1 -2.0 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS26625 -1.1 -2.8 gluconate transporter periplasmic gluconate-binding protein compare
BWI76_RS22850 -1.1 -1.5 tRNA pseudouridine synthase TruC compare
BWI76_RS19235 -1.1 -2.2 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS22625 -1.1 -1.1 transcriptional regulator compare
BWI76_RS16485 -1.1 -0.8 ribonuclease T compare


Specific Phenotypes

For 2 genes in this experiment