Experiment set32IT038 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -10.0 -5.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS02995 -9.2 -9.9 aspartate carbamoyltransferase compare
BWI76_RS04470 -7.8 -11.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS19050 -7.3 -8.7 NAD(P)-dependent oxidoreductase compare
BWI76_RS10990 -7.2 -2.8 dihydroorotase compare
BWI76_RS19055 -6.7 -11.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS01210 -6.6 -2.8 tyrosine recombinase XerC compare
BWI76_RS08395 -6.2 -1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS09645 -6.2 -1.5 thioredoxin-disulfide reductase compare
BWI76_RS19040 -5.9 -4.0 hypothetical protein compare
BWI76_RS15225 -5.8 -3.9 DeoR family transcriptional regulator compare
BWI76_RS07725 -5.5 -1.3 iron-enterobactin transporter permease compare
BWI76_RS19070 -5.2 -10.3 rhamnosyltransferase compare
BWI76_RS19045 -5.1 -7.0 capsular polysaccharide biosynthesis protein compare
BWI76_RS15110 -5.1 -10.4 putative excinuclease ABC subunit A compare
BWI76_RS27385 -5.1 -7.1 orotate phosphoribosyltransferase compare
BWI76_RS20150 -5.0 -2.1 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS19060 -5.0 -11.4 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS09910 -4.7 -16.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS23265 -4.5 -3.4 hypothetical protein compare
BWI76_RS00600 -4.4 -6.9 LacI family transcriptional regulator compare
BWI76_RS08405 -4.4 -2.3 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS01350 -4.3 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS26085 -4.3 -1.8 3-dehydroquinate synthase compare
BWI76_RS02815 -4.2 -2.4 fructose-bisphosphatase class I compare
BWI76_RS24900 -4.2 -2.0 DeoR family transcriptional regulator compare
BWI76_RS19035 -4.2 -2.9 dTDP-rhamnosyl transferase compare
BWI76_RS26075 -4.2 -4.7 DNA adenine methylase compare
BWI76_RS20180 -4.1 -5.1 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS19010 -4.0 -2.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS08535 -3.9 -1.6 translocation protein TolB compare
BWI76_RS23330 -3.9 -3.9 transcriptional regulator GalR compare
BWI76_RS13915 -3.9 -8.3 magnesium transport protein MgtC compare
BWI76_RS23895 -3.8 -1.6 Xaa-Pro aminopeptidase compare
BWI76_RS12090 -3.7 -4.4 HNH endonuclease compare
BWI76_RS02580 -3.7 -1.5 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS15115 -3.6 -2.5 MFS transporter compare
BWI76_RS04715 -3.6 -1.2 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS08385 -3.6 -3.1 citrate (Si)-synthase compare
BWI76_RS19065 -3.6 -12.1 dTDP-glucose 4,6-dehydratase compare
BWI76_RS21370 -3.4 -1.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS26095 -3.4 -1.2 shikimate kinase compare
BWI76_RS23885 -3.3 -1.1 2-octaprenylphenol hydroxylase compare
BWI76_RS12145 -3.3 -2.1 hypothetical protein compare
BWI76_RS03080 -3.3 -3.5 (Fe-S)-cluster assembly protein compare
BWI76_RS01800 -3.2 -3.7 glucose-6-phosphate isomerase compare
BWI76_RS11335 -3.1 -1.1 tautomerase compare
BWI76_RS27440 -3.0 -3.2 DNA helicase RecG compare
BWI76_RS15825 -3.0 -2.8 hypothetical protein compare
BWI76_RS04510 -2.9 -1.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS08430 -2.8 -5.8 succinate--CoA ligase subunit alpha compare
BWI76_RS09190 -2.8 -4.2 hypothetical protein compare
BWI76_RS08390 -2.8 -3.1 hypothetical protein compare
BWI76_RS08720 -2.7 -1.7 imidazolonepropionase compare
BWI76_RS04705 -2.7 -5.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS01200 -2.7 -1.4 diaminopimelate epimerase compare
BWI76_RS12170 -2.7 -4.5 hypothetical protein compare
BWI76_RS27390 -2.7 -3.4 ribonuclease PH compare
BWI76_RS08425 -2.6 -3.8 succinyl-CoA ligase subunit beta compare
BWI76_RS07465 -2.6 -1.2 TetR family transcriptional regulator compare
BWI76_RS20130 -2.5 -4.7 NADH-quinone oxidoreductase subunit N compare
BWI76_RS06340 -2.5 -1.1 hypothetical protein compare
BWI76_RS23240 -2.4 -1.7 exonuclease V subunit gamma compare
BWI76_RS12285 -2.4 -2.5 hypothetical protein compare
BWI76_RS27475 -2.4 -8.6 regulatory protein GntR family protein compare
BWI76_RS02610 -2.4 -3.3 transcriptional regulator compare
BWI76_RS23915 -2.4 -1.8 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS12040 -2.4 -1.1 hypothetical protein compare
BWI76_RS09660 -2.3 -1.2 DNA translocase FtsK compare
BWI76_RS23830 -2.3 -4.5 hypothetical protein compare
BWI76_RS09640 -2.3 -2.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS00180 -2.2 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS25600 -2.2 -0.8 tRNA-Thr compare
BWI76_RS16955 -2.2 -0.9 hypothetical protein compare
BWI76_RS03595 -2.2 -1.3 ethanolamine utilization protein EutM compare
BWI76_RS03880 -2.2 -3.7 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS01185 -2.2 -1.4 adenylate cyclase compare
BWI76_RS20650 -2.2 -1.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS01220 -2.2 -5.2 DNA-dependent helicase II compare
BWI76_RS24280 -2.1 -3.8 biopolymer transporter ExbB compare
BWI76_RS00065 -2.1 -5.5 MurR/RpiR family transcriptional regulator compare
BWI76_RS27075 -2.1 -4.5 IclR family transcriptional regulator compare
BWI76_RS11965 -2.1 -1.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS02530 -2.1 -1.9 tRNA dimethylallyltransferase compare
BWI76_RS08210 -2.1 -1.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS02050 -2.1 -1.3 CidA/LrgA family protein compare
BWI76_RS20165 -2.1 -4.4 NADH-quinone oxidoreductase subunit G compare
BWI76_RS13920 -2.0 -3.4 magnesium-translocating P-type ATPase compare
BWI76_RS01110 -2.0 -3.4 TDP-fucosamine acetyltransferase compare
BWI76_RS14075 -2.0 -1.3 TetR family transcriptional regulator compare
BWI76_RS16140 -2.0 -1.7 3-oxoadipate CoA-transferase compare
BWI76_RS07675 -2.0 -4.1 DeoR family transcriptional regulator compare
BWI76_RS04145 -2.0 -2.8 purine-nucleoside phosphorylase compare
BWI76_RS02180 -2.0 -0.9 hypothetical protein compare
BWI76_RS20270 -2.0 -4.4 hypothetical protein compare
BWI76_RS09635 -2.0 -0.9 amino acid ABC transporter ATP-binding protein compare
BWI76_RS06535 -1.9 -4.0 endopeptidase La compare
BWI76_RS21245 -1.9 -2.5 nitrogen regulatory protein P-II compare
BWI76_RS08500 -1.9 -2.3 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS20140 -1.9 -4.3 NADH-quinone oxidoreductase subunit L compare
BWI76_RS05120 -1.9 -9.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS24275 -1.9 -2.8 biopolymer transport protein ExbD compare
BWI76_RS08205 -1.9 -3.2 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS05680 -1.9 -2.4 LacI family transcriptional regulator compare
BWI76_RS20135 -1.8 -2.2 NADH-quinone oxidoreductase subunit M compare
BWI76_RS08520 -1.8 -1.0 colicin transporter TolQ compare
BWI76_RS08495 -1.8 -2.1 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS25280 -1.8 -1.3 RNase adaptor protein RapZ compare
BWI76_RS11680 -1.8 -2.9 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS14935 -1.8 -1.0 NIPSNAP family containing protein compare
BWI76_RS20170 -1.8 -3.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS13400 -1.8 -2.7 GntR family transcriptional regulator compare
BWI76_RS23355 -1.7 -3.7 LacI family transcriptional regulator compare
BWI76_RS15830 -1.7 -2.0 hypothetical protein compare
BWI76_RS15955 -1.7 -2.2 transcriptional regulator compare
BWI76_RS10575 -1.7 -1.1 polar amino acid ABC transporter permease compare
BWI76_RS18200 -1.7 -4.7 copper homeostasis protein CutC compare
BWI76_RS27280 -1.7 -6.3 polymerase compare
BWI76_RS01205 -1.7 -2.1 DUF484 family protein compare
BWI76_RS12235 -1.7 -1.9 hypothetical protein compare
BWI76_RS20895 -1.7 -1.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS09530 -1.7 -0.8 hypothetical protein compare
BWI76_RS24100 -1.7 -2.9 YggS family pyridoxal phosphate enzyme compare
BWI76_RS17045 -1.6 -1.0 hypothetical protein compare
BWI76_RS01615 -1.6 -5.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS07070 -1.6 -3.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS08530 -1.6 -1.4 protein TolA compare
BWI76_RS24340 -1.6 -4.0 two-component sensor histidine kinase compare
BWI76_RS12470 -1.6 -1.0 thiosulfate sulfurtransferase PspE compare
BWI76_RS26175 -1.6 -3.2 DeoR/GlpR family transcriptional regulator compare
BWI76_RS12265 -1.6 -3.9 hypothetical protein compare
BWI76_RS25485 -1.6 -1.0 septum formation protein Maf compare
BWI76_RS26670 -1.6 -7.5 two-component sensor histidine kinase compare
BWI76_RS24850 -1.6 -5.5 DeoR family transcriptional regulator compare
BWI76_RS14870 -1.6 -1.7 hypothetical protein compare
BWI76_RS21450 -1.5 -1.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS05015 -1.5 -1.6 transcriptional regulator compare
BWI76_RS13315 -1.5 -1.5 50S ribosomal protein L7/L12-serine acetyltransferase compare
BWI76_RS08725 -1.5 -3.9 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS22125 -1.5 -1.7 membrane protein compare
BWI76_RS15350 -1.5 -0.9 hypothetical protein compare
BWI76_RS21100 -1.5 -1.8 nucleoside-diphosphate kinase compare
BWI76_RS22755 -1.5 -3.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15840 -1.5 -1.4 prophage protein compare
BWI76_RS20995 -1.5 -3.8 RNA degradosome polyphosphate kinase compare
BWI76_RS22240 -1.5 -2.8 transcriptional regulator compare
BWI76_RS15860 -1.5 -1.3 adenine-specific DNA methyltransferase compare
BWI76_RS06560 -1.5 -2.7 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS25070 -1.5 -0.8 hypothetical protein compare
BWI76_RS20965 -1.5 -2.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00140 -1.5 -0.6 phosphate transport system regulator PhoU compare
BWI76_RS22420 -1.5 -1.4 LacI family transcriptional regulator compare
BWI76_RS04605 -1.4 -0.8 thiamine ABC transporter ATP-binding protein compare
BWI76_RS12255 -1.4 -7.5 hypothetical protein compare
BWI76_RS20640 -1.4 -3.5 cysteine synthase A compare
BWI76_RS19860 -1.4 -1.7 hypothetical protein compare
BWI76_RS17195 -1.4 -1.6 hypothetical protein compare
BWI76_RS26940 -1.4 -7.2 transcriptional regulator compare
BWI76_RS26665 -1.4 -2.5 DNA-binding response regulator compare
BWI76_RS12270 -1.4 -3.2 hypothetical protein compare
BWI76_RS02550 -1.4 -3.5 protease modulator HflC compare
BWI76_RS23230 -1.4 -1.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS04645 -1.4 -2.4 3-dehydroquinase compare
BWI76_RS20360 -1.4 -0.7 cell division protein DedD compare
BWI76_RS11410 -1.4 -1.4 leucine efflux protein compare
BWI76_RS24115 -1.4 -3.7 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS16315 -1.4 -0.9 SirA-like protein compare
BWI76_RS14670 -1.4 -1.3 hypothetical protein compare
BWI76_RS27275 -1.3 -4.0 hypothetical protein compare
BWI76_RS15230 -1.3 -4.4 4-hydroxythreonine-4-phosphate dehydrogenase compare
BWI76_RS05790 -1.3 -1.0 phage DNA-binding protein compare
BWI76_RS20145 -1.3 -0.8 NADH-quinone oxidoreductase subunit K compare
BWI76_RS01380 -1.3 -2.0 YigZ family protein compare
BWI76_RS20190 -1.3 -2.4 NADH-quinone oxidoreductase subunit A compare
BWI76_RS16275 -1.3 -1.6 fumarate hydratase FumA compare
BWI76_RS12240 -1.3 -4.0 terminase small subunit compare
BWI76_RS25420 -1.3 -2.7 malate dehydrogenase compare
BWI76_RS07525 -1.3 -2.3 ABC transporter permease compare
BWI76_RS27170 -1.3 -3.0 MltR family transcriptional regulator compare
BWI76_RS26575 -1.3 -2.8 universal stress protein B compare
BWI76_RS01935 -1.3 -1.0 thiamin phosphate synthase compare
BWI76_RS03015 -1.3 -2.0 RNase E inhibitor protein compare
BWI76_RS27830 -1.2 -1.7 type I toxin-antitoxin system toxin TisB compare
BWI76_RS06235 -1.2 -1.7 PAS domain-containing sensor histidine kinase compare
BWI76_RS09625 -1.2 -0.8 hypothetical protein compare
BWI76_RS25425 -1.2 -0.9 arginine repressor compare
BWI76_RS07705 -1.2 -2.0 enterochelin esterase compare
BWI76_RS05785 -1.2 -1.8 CI repressor compare
BWI76_RS09870 -1.2 -3.5 aromatic amino acid aminotransferase compare
BWI76_RS18110 -1.2 -2.6 transcriptional regulator HexR compare
BWI76_RS22690 -1.2 -1.4 adenylyl-sulfate kinase compare
BWI76_RS18055 -1.2 -2.3 copper resistance protein D compare
BWI76_RS19770 -1.2 -1.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS22975 -1.2 -2.5 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA compare
BWI76_RS01805 -1.2 -2.0 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS25680 -1.2 -3.7 16S rRNA m5C967 methyltransferase compare
BWI76_RS25300 -1.2 -1.7 hybrid sensor histidine kinase/response regulator compare
BWI76_RS00765 -1.2 -3.0 DNA-binding transcriptional regulator CytR compare
BWI76_RS12295 -1.2 -2.2 hypothetical protein compare
BWI76_RS09025 -1.2 -1.1 GntR family transcriptional regulator compare


Specific Phenotypes

For 2 genes in this experiment