Experiment set32IT037 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with no fungus

200 most important genes:

  gene name fitness t score description  
BWI76_RS04470 -8.4 -11.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS04465 -8.3 -5.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS19050 -7.7 -5.3 NAD(P)-dependent oxidoreductase compare
BWI76_RS19055 -7.3 -10.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS02995 -7.3 -8.0 aspartate carbamoyltransferase compare
BWI76_RS10990 -7.1 -2.5 dihydroorotase compare
BWI76_RS00600 -7.0 -6.9 LacI family transcriptional regulator compare
BWI76_RS09645 -6.1 -1.4 thioredoxin-disulfide reductase compare
BWI76_RS19040 -5.7 -3.9 hypothetical protein compare
BWI76_RS15290 -5.4 -1.2 transcriptional regulator compare
BWI76_RS04525 -5.3 -2.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS19060 -5.2 -13.3 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS19840 -5.1 -1.1 hypothetical protein compare
BWI76_RS19045 -5.1 -6.5 capsular polysaccharide biosynthesis protein compare
BWI76_RS07640 -5.1 -1.9 short chain dehydrogenase compare
BWI76_RS20145 -5.0 -1.1 NADH-quinone oxidoreductase subunit K compare
BWI76_RS09615 -4.8 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS09910 -4.8 -14.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS15110 -4.7 -11.8 putative excinuclease ABC subunit A compare
BWI76_RS08530 -4.6 -1.4 protein TolA compare
BWI76_RS23265 -4.3 -3.4 hypothetical protein compare
BWI76_RS23330 -4.3 -4.3 transcriptional regulator GalR compare
BWI76_RS19070 -4.2 -8.7 rhamnosyltransferase compare
BWI76_RS26085 -4.1 -1.6 3-dehydroquinate synthase compare
BWI76_RS19010 -3.9 -2.2 polysaccharide pyruvyl transferase yvff compare
BWI76_RS12090 -3.7 -5.7 HNH endonuclease compare
BWI76_RS15225 -3.7 -2.4 DeoR family transcriptional regulator compare
BWI76_RS02815 -3.6 -2.1 fructose-bisphosphatase class I compare
BWI76_RS22420 -3.5 -1.8 LacI family transcriptional regulator compare
BWI76_RS09640 -3.4 -1.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS19035 -3.4 -6.1 dTDP-rhamnosyl transferase compare
BWI76_RS26175 -3.4 -2.7 DeoR/GlpR family transcriptional regulator compare
BWI76_RS04100 -3.3 -3.3 peptide chain release factor 3 compare
BWI76_RS11965 -3.3 -2.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26095 -3.3 -1.0 shikimate kinase compare
BWI76_RS23885 -3.3 -1.0 2-octaprenylphenol hydroxylase compare
BWI76_RS15920 -3.1 -1.2 hypothetical protein compare
BWI76_RS13915 -3.1 -6.0 magnesium transport protein MgtC compare
BWI76_RS17190 -3.1 -2.3 TonB system transport protein TonB compare
BWI76_RS19065 -3.1 -11.7 dTDP-glucose 4,6-dehydratase compare
BWI76_RS20150 -3.0 -1.9 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS01210 -3.0 -2.0 tyrosine recombinase XerC compare
BWI76_RS27390 -3.0 -4.6 ribonuclease PH compare
BWI76_RS26075 -3.0 -2.7 DNA adenine methylase compare
BWI76_RS21450 -2.9 -1.7 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS14410 -2.9 -2.6 hypothetical protein compare
BWI76_RS08425 -2.8 -3.3 succinyl-CoA ligase subunit beta compare
BWI76_RS02530 -2.8 -1.8 tRNA dimethylallyltransferase compare
BWI76_RS04705 -2.8 -4.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS15115 -2.7 -4.2 MFS transporter compare
BWI76_RS27385 -2.7 -4.5 orotate phosphoribosyltransferase compare
BWI76_RS19845 -2.6 -5.2 phosphatase compare
BWI76_RS01350 -2.5 -0.8 NAD(P)H-flavin reductase compare
BWI76_RS08390 -2.5 -2.7 hypothetical protein compare
BWI76_RS15620 -2.5 -1.4 hypothetical protein compare
BWI76_RS12170 -2.5 -4.5 hypothetical protein compare
BWI76_RS13820 -2.5 -1.7 hypothetical protein compare
BWI76_RS26190 -2.4 -3.0 glycerol-3-phosphate dehydrogenase compare
BWI76_RS21075 -2.4 -1.3 membrane protein compare
BWI76_RS16455 -2.4 -1.2 superoxide dismutase compare
BWI76_RS08375 -2.3 -1.7 pyroglutamyl-peptidase I compare
BWI76_RS15955 -2.3 -2.1 transcriptional regulator compare
BWI76_RS24955 -2.3 -1.4 hypothetical protein compare
BWI76_RS16485 -2.3 -1.0 ribonuclease T compare
BWI76_RS08535 -2.3 -1.5 translocation protein TolB compare
BWI76_RS08430 -2.3 -4.7 succinate--CoA ligase subunit alpha compare
BWI76_RS01385 -2.3 -1.6 potassium transporter compare
BWI76_RS20380 -2.3 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS25600 -2.3 -0.7 tRNA-Thr compare
BWI76_RS20135 -2.2 -2.9 NADH-quinone oxidoreductase subunit M compare
BWI76_RS23240 -2.2 -1.5 exonuclease V subunit gamma compare
BWI76_RS24900 -2.2 -1.5 DeoR family transcriptional regulator compare
BWI76_RS25300 -2.2 -2.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS27075 -2.1 -5.2 IclR family transcriptional regulator compare
BWI76_RS09190 -2.1 -3.0 hypothetical protein compare
BWI76_RS20190 -2.1 -3.1 NADH-quinone oxidoreductase subunit A compare
BWI76_RS21310 -2.1 -0.9 DNA repair protein RecO compare
BWI76_RS07725 -2.1 -1.0 iron-enterobactin transporter permease compare
BWI76_RS09660 -2.1 -1.0 DNA translocase FtsK compare
BWI76_RS27475 -2.1 -5.9 regulatory protein GntR family protein compare
BWI76_RS08720 -2.0 -1.3 imidazolonepropionase compare
BWI76_RS27440 -2.0 -2.5 DNA helicase RecG compare
BWI76_RS05790 -2.0 -1.1 phage DNA-binding protein compare
BWI76_RS15840 -2.0 -2.0 prophage protein compare
BWI76_RS06490 -2.0 -4.2 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS17045 -2.0 -1.1 hypothetical protein compare
BWI76_RS24740 -2.0 -2.3 GntR family transcriptional regulator compare
BWI76_RS04510 -2.0 -1.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS20650 -2.0 -1.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS08385 -2.0 -2.0 citrate (Si)-synthase compare
BWI76_RS27170 -1.9 -5.7 MltR family transcriptional regulator compare
BWI76_RS08405 -1.9 -1.3 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS24275 -1.9 -2.6 biopolymer transport protein ExbD compare
BWI76_RS06475 -1.9 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS06015 -1.9 -1.2 hypothetical protein compare
BWI76_RS13240 -1.9 -0.9 hypothetical protein compare
BWI76_RS01325 -1.9 -1.3 twin-arginine translocase subunit TatB compare
BWI76_RS05680 -1.9 -2.8 LacI family transcriptional regulator compare
BWI76_RS17530 -1.9 -1.8 hypothetical protein compare
BWI76_RS04645 -1.8 -2.6 3-dehydroquinase compare
BWI76_RS03415 -1.8 -2.6 LacI family transcriptional regulator compare
BWI76_RS15850 -1.8 -0.7 DUF1317 domain-containing protein compare
BWI76_RS20165 -1.8 -3.3 NADH-quinone oxidoreductase subunit G compare
BWI76_RS08500 -1.8 -1.6 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS08205 -1.8 -3.1 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS01205 -1.8 -1.9 DUF484 family protein compare
BWI76_RS26775 -1.8 -4.0 endo-1,4-D-glucanase compare
BWI76_RS24825 -1.8 -1.4 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS23830 -1.7 -2.8 hypothetical protein compare
BWI76_RS09635 -1.7 -0.7 amino acid ABC transporter ATP-binding protein compare
BWI76_RS13920 -1.7 -3.6 magnesium-translocating P-type ATPase compare
BWI76_RS02610 -1.7 -3.1 transcriptional regulator compare
BWI76_RS25280 -1.7 -1.2 RNase adaptor protein RapZ compare
BWI76_RS06485 -1.7 -1.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS13575 -1.7 -2.3 sugar binding transcriptional regulator, LacI family protein compare
BWI76_RS21325 -1.7 -2.0 hypothetical protein compare
BWI76_RS20170 -1.7 -2.7 NADH-quinone oxidoreductase subunit F compare
BWI76_RS05260 -1.7 -1.1 chaperone compare
BWI76_RS19730 -1.7 -2.9 1-phosphofructokinase compare
BWI76_RS11690 -1.7 -3.3 succinylglutamate desuccinylase compare
BWI76_RS19705 -1.6 -3.7 kinase compare
BWI76_RS08395 -1.6 -1.2 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS20140 -1.6 -2.5 NADH-quinone oxidoreductase subunit L compare
BWI76_RS07730 -1.6 -0.9 iron-enterobactin transporter membrane protein compare
BWI76_RS07780 -1.6 -0.8 hypothetical protein compare
BWI76_RS12270 -1.6 -2.5 hypothetical protein compare
BWI76_RS20730 -1.6 -1.0 hypothetical protein compare
BWI76_RS18230 -1.6 -1.9 trehalose-6-phosphate synthase compare
BWI76_RS16895 -1.6 -1.0 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS16510 -1.6 -1.8 transcriptional repressor PurR compare
BWI76_RS26570 -1.6 -1.6 anion permease compare
BWI76_RS12665 -1.6 -1.3 hypothetical protein compare
BWI76_RS24850 -1.6 -3.9 DeoR family transcriptional regulator compare
BWI76_RS05120 -1.6 -6.7 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS26590 -1.5 -2.4 transcriptional regulator compare
BWI76_RS25425 -1.5 -0.9 arginine repressor compare
BWI76_RS27305 -1.5 -4.6 glycosyl transferase compare
BWI76_RS10500 -1.5 -1.4 flavoprotein monooxygenase compare
BWI76_RS13595 -1.5 -2.5 transcriptional regulator compare
BWI76_RS00080 -1.5 -2.0 N-acetylmannosamine kinase compare
BWI76_RS07070 -1.5 -2.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS01125 -1.5 -3.0 4-alpha-L-fucosyltransferase compare
BWI76_RS14625 -1.5 -0.9 protein TolA compare
BWI76_RS07745 -1.5 -4.4 isochorismate synthase EntC compare
BWI76_RS01170 -1.5 -1.5 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS08520 -1.5 -0.8 colicin transporter TolQ compare
BWI76_RS12255 -1.5 -6.1 hypothetical protein compare
BWI76_RS07705 -1.5 -1.6 enterochelin esterase compare
BWI76_RS07675 -1.5 -2.7 DeoR family transcriptional regulator compare
BWI76_RS20895 -1.5 -1.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS14050 -1.4 -1.2 AP endonuclease, family 2 compare
BWI76_RS15860 -1.4 -1.3 adenine-specific DNA methyltransferase compare
BWI76_RS04200 -1.4 -1.8 phosphoglycerate mutase GpmB compare
BWI76_RS04315 -1.4 -4.8 Na+/H+ antiporter NhaA compare
BWI76_RS26670 -1.4 -4.3 two-component sensor histidine kinase compare
BWI76_RS05570 -1.4 -0.6 hypothetical protein compare
BWI76_RS12450 -1.4 -1.3 phage shock protein PspA compare
BWI76_RS06495 -1.4 -5.0 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS24635 -1.4 -1.5 autoinducer-2 (AI-2) modifying protein LsrG compare
BWI76_RS10305 -1.4 -3.6 transposase compare
BWI76_RS25420 -1.4 -3.8 malate dehydrogenase compare
BWI76_RS26665 -1.4 -2.2 DNA-binding response regulator compare
BWI76_RS24485 -1.4 -1.0 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS27275 -1.4 -4.0 hypothetical protein compare
BWI76_RS03235 -1.4 -7.8 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS04140 -1.4 -3.2 phosphopentomutase compare
BWI76_RS00345 -1.3 -1.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS12275 -1.3 -3.4 hypothetical protein compare
BWI76_RS07255 -1.3 -1.2 hypothetical protein compare
BWI76_RS26425 -1.3 -4.8 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS07690 -1.3 -3.3 enterochelin synthetase component D compare
BWI76_RS01220 -1.3 -3.2 DNA-dependent helicase II compare
BWI76_RS17110 -1.3 -1.0 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS20350 -1.3 -3.4 amidophosphoribosyltransferase compare
BWI76_RS25480 -1.3 -1.1 ribonuclease E/G compare
BWI76_RS24120 -1.3 -2.4 YggW family oxidoreductase compare
BWI76_RS12225 -1.3 -1.4 hypothetical protein compare
BWI76_RS12250 -1.3 -5.3 terminase compare
BWI76_RS21580 -1.3 -0.9 SsrA-binding protein compare
BWI76_RS22240 -1.3 -5.1 transcriptional regulator compare
BWI76_RS02050 -1.3 -1.1 CidA/LrgA family protein compare
BWI76_RS06405 -1.3 -1.8 2-dehydropantoate 2-reductase compare
BWI76_RS02550 -1.3 -2.3 protease modulator HflC compare
BWI76_RS21100 -1.3 -1.6 nucleoside-diphosphate kinase compare
BWI76_RS01610 -1.2 -3.5 phosphoribosylamine--glycine ligase compare
BWI76_RS04655 -1.2 -1.2 shikimate dehydrogenase compare
BWI76_RS03225 -1.2 -2.9 transcriptional regulator compare
BWI76_RS00765 -1.2 -3.7 DNA-binding transcriptional regulator CytR compare
BWI76_RS08210 -1.2 -0.7 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS04605 -1.2 -0.7 thiamine ABC transporter ATP-binding protein compare
BWI76_RS04515 -1.2 -0.7 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS09860 -1.2 -1.9 hypothetical protein compare
BWI76_RS03025 -1.2 -1.0 N-acetyltransferase compare
BWI76_RS16675 -1.2 -1.0 ABC transporter compare
BWI76_RS09970 -1.2 -0.9 porin OmpA compare
BWI76_RS08495 -1.2 -2.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS02570 -1.2 -3.2 transcriptional regulator compare
BWI76_RS15835 -1.2 -1.0 hypothetical protein compare
BWI76_RS00720 -1.2 -1.5 DNA-binding response regulator compare
BWI76_RS20640 -1.2 -2.8 cysteine synthase A compare


Specific Phenotypes

For 3 genes in this experiment