Experiment set32IT037 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with no fungus

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS02180 +5.5 2.5 hypothetical protein compare
BWI76_RS19145 +4.6 14.5 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS07740 +3.4 1.4 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS22300 +3.3 9.5 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS00725 +3.3 1.3 periplasmic repressor CpxP compare
BWI76_RS21070 +3.1 1.8 outer membrane protein assembly factor BamB compare
BWI76_RS16425 +3.1 2.6 hypothetical protein compare
BWI76_RS15260 +3.0 6.6 hypothetical protein compare
BWI76_RS16955 +2.8 4.4 hypothetical protein compare
BWI76_RS11060 +2.8 1.8 septum formation inhibitor Maf compare
BWI76_RS09130 +2.8 2.0 biofilm formation regulatory protein BssR compare
BWI76_RS04710 +2.7 1.8 hypothetical protein compare
BWI76_RS05655 +2.6 1.4 hypothetical protein compare
BWI76_RS18780 +2.5 2.6 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS25435 +2.5 1.6 membrane protein compare
BWI76_RS16860 +2.5 1.4 acyl-CoA dehydrogenase compare
BWI76_RS06540 +2.4 1.8 DNA-binding protein HU-beta compare
BWI76_RS17100 +2.3 2.0 glutathione peroxidase compare
BWI76_RS06375 +2.3 1.4 oxidoreductase compare
BWI76_RS05045 +2.3 5.6 general secretion pathway protein GspM compare
BWI76_RS13415 +2.3 1.4 spermidine/putrescine ABC transporter permease compare
BWI76_RS03190 +2.2 1.3 hypothetical protein compare
BWI76_RS16330 +2.2 2.0 oxidoreductase compare
BWI76_RS19515 +2.2 1.5 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) compare
BWI76_RS22645 +2.2 4.9 RNA polymerase sigma factor RpoS compare
BWI76_RS27425 +2.1 3.6 DNA-directed RNA polymerase subunit omega compare
BWI76_RS06525 +2.1 9.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS14065 +2.1 1.9 hypothetical protein compare
BWI76_RS18550 +2.1 3.9 tRNA-Asn compare
BWI76_RS13400 +2.0 1.4 GntR family transcriptional regulator compare
BWI76_RS05015 +2.0 2.4 transcriptional regulator compare
BWI76_RS11040 +2.0 0.9 ribonuclease E compare
BWI76_RS15315 +2.0 1.5 DNA-binding protein compare
BWI76_RS18845 +2.0 1.6 nitrogen fixation protein NifX compare
BWI76_RS05050 +1.9 1.5 general secretion pathway protein GspL compare
BWI76_RS20970 +1.9 3.1 phosphoribosylglycinamide formyltransferase compare
BWI76_RS12080 +1.9 1.5 hypothetical protein compare
BWI76_RS19215 +1.8 3.1 proline-specific peptidase compare
BWI76_RS13855 +1.8 1.9 peroxiredoxin compare
BWI76_RS27455 +1.8 1.5 DUF805 domain-containing protein compare
BWI76_RS22050 +1.8 1.4 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI compare
BWI76_RS06885 +1.8 1.8 TonB family protein compare
BWI76_RS06130 +1.8 1.6 extensin family protein compare
BWI76_RS16645 +1.8 1.9 DeoR family transcriptional regulator compare
BWI76_RS07380 +1.7 2.1 hypothetical protein compare
BWI76_RS20335 +1.7 2.0 zinc transporter compare
BWI76_RS07515 +1.7 2.1 glutamate--cysteine ligase compare
BWI76_RS05515 +1.7 1.3 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
BWI76_RS09895 +1.7 1.7 aliphatic sulfonates ABC transporter ATP-binding protein compare
BWI76_RS07785 +1.7 2.3 transcriptional regulator compare
BWI76_RS24345 +1.7 1.5 NADPH quinone reductase MdaB compare
BWI76_RS07635 +1.6 1.3 Hok/gef cell toxic protein compare
BWI76_RS06245 +1.6 1.3 proline-specific permease ProY compare
BWI76_RS21165 +1.6 2.8 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS25910 +1.6 1.1 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS07885 +1.6 1.0 sugar ABC transporter permease compare
BWI76_RS06795 +1.6 1.5 hypothetical protein compare
BWI76_RS11750 +1.5 1.9 chitooligosaccharide deacetylase compare
BWI76_RS27510 +1.5 1.3 aquaporin compare
BWI76_RS19520 +1.5 0.9 acetyltransferase GCN5 compare
BWI76_RS23720 +1.5 1.0 calcium-binding protein compare
BWI76_RS23365 +1.5 1.3 LysR family transcriptional regulator compare
BWI76_RS19880 +1.5 1.1 magnesium transporter compare
BWI76_RS16035 +1.4 1.8 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS06395 +1.4 0.9 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS17785 +1.4 1.4 septum site-determining protein MinD compare
BWI76_RS11520 +1.4 1.6 hypothetical protein compare
BWI76_RS27605 +1.4 1.3 hypothetical protein compare
BWI76_RS14975 +1.4 2.5 glyoxalase-like domain protein compare
BWI76_RS10280 +1.3 1.0 polar amino acid ABC transporter permease compare
BWI76_RS09165 +1.3 0.8 phosphatase YbjI compare
BWI76_RS16495 +1.3 1.0 endopeptidase compare
BWI76_RS11010 +1.3 2.3 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS01595 +1.3 1.4 zinc resistance protein compare
BWI76_RS17155 +1.3 1.6 hypothetical protein compare
BWI76_RS27850 +1.3 1.6 DNA-binding transcriptional regulator DsdC compare
BWI76_RS19440 +1.3 1.7 putative transporter subunit compare
BWI76_RS00800 +1.3 1.4 LysR family transcriptional regulator compare
BWI76_RS17420 +1.3 1.3 hypothetical protein compare
BWI76_RS13550 +1.3 1.4 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS27195 +1.3 1.7 alpha-hydroxy-acid oxidizing enzyme compare
BWI76_RS10470 +1.3 1.5 iron ABC transporter substrate-binding protein compare
BWI76_RS06530 +1.3 4.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS07955 +1.3 1.5 nucleoside diphosphate kinase regulator compare
BWI76_RS11430 +1.3 1.2 lipoprotein compare
BWI76_RS24680 +1.3 1.5 23S rRNA (guanine(1835)-N(2))-methyltransferase compare
BWI76_RS08275 +1.3 1.0 LexA regulated protein compare
BWI76_RS23155 +1.3 1.2 microcompartment protein PduM compare
BWI76_RS19690 +1.3 1.4 LysR family transcriptional regulator compare
BWI76_RS06110 +1.3 1.6 hypothetical protein compare
BWI76_RS03105 +1.3 1.3 myo-inosose-2 dehydratase compare
BWI76_RS11950 +1.3 1.2 phosphatidylglycerophosphatase B compare
BWI76_RS02680 +1.3 1.5 EamA family transporter compare
BWI76_RS17715 +1.2 1.7 murein transglycosylase compare
BWI76_RS22895 +1.2 1.6 FAD-dependent oxidoreductase compare
BWI76_RS03740 +1.2 1.1 hypothetical protein compare
BWI76_RS16980 +1.2 1.2 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS11940 +1.2 1.7 aconitate hydratase 1 compare
BWI76_RS27730 +1.2 1.5 ISNCY family transposase compare
BWI76_RS07760 +1.2 2.9 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS25335 +1.2 3.1 stringent starvation protein A compare
BWI76_RS15740 +1.2 3.5 HNH endonuclease compare
BWI76_RS13980 +1.2 1.6 hypothetical protein compare
BWI76_RS10525 +1.2 1.3 cytosine/purines uracil thiamine allantoin permease compare
BWI76_RS00715 +1.2 2.8 two-component sensor histidine kinase compare
BWI76_RS08105 +1.2 3.4 glutamate/aspartate ABC transporter permease GltJ compare
BWI76_RS18905 +1.2 0.8 putrescine/spermidine ABC transporter compare
BWI76_RS07870 +1.2 1.0 carbohydrate kinase compare
BWI76_RS16140 +1.2 0.9 3-oxoadipate CoA-transferase compare
BWI76_RS21695 +1.2 1.4 glycosyl transferase family protein compare
BWI76_RS27835 +1.1 1.3 acyltransferase compare
BWI76_RS16490 +1.1 2.1 glutaredoxin compare
BWI76_RS12895 +1.1 2.5 hypothetical protein compare
BWI76_RS09015 +1.1 1.1 aldo/keto reductase compare
BWI76_RS13395 +1.1 1.8 cytochrome D ubiquinol oxidase subunit I compare
BWI76_RS11135 +1.1 1.5 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS05840 +1.1 3.8 glutamate 5-kinase compare
BWI76_RS17975 +1.1 2.5 tail-specific protease compare
BWI76_RS18580 +1.1 0.8 hypothetical protein compare
BWI76_RS03885 +1.1 1.8 hypothetical protein compare
BWI76_RS11900 +1.1 1.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS20560 +1.1 1.0 hypothetical protein compare
BWI76_RS00075 +1.1 3.0 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS07475 +1.1 1.1 DNA-binding transcriptional regulator RamA compare
BWI76_RS14605 +1.1 0.8 ABC transporter permease compare
BWI76_RS07460 +1.1 2.3 hypothetical protein compare
BWI76_RS11400 +1.1 1.6 SAM-dependent methyltransferase compare
BWI76_RS19495 +1.1 1.0 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS16400 +1.1 2.6 pyridoxal kinase compare
BWI76_RS15220 +1.1 1.4 L-lactate dehydrogenase compare
BWI76_RS09255 +1.1 1.6 hypothetical protein compare
BWI76_RS25415 +1.1 1.3 GntR family transcriptional regulator compare
BWI76_RS06865 +1.1 1.9 bifunctional UDP-sugar hydrolase/5'-nucleotidase compare
BWI76_RS25230 +1.1 2.0 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS26620 +1.1 0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS05235 +1.1 0.8 hypothetical protein compare
BWI76_RS25510 +1.1 0.9 oxidoreductase compare
BWI76_RS24980 +1.0 2.0 LLM class flavin-dependent oxidoreductase compare
BWI76_RS07645 +1.0 1.3 short-chain dehydrogenase/reductase compare
BWI76_RS07985 +1.0 0.9 fluoride ion transporter CrcB compare
BWI76_RS23900 +1.0 1.9 hypothetical protein compare
BWI76_RS10035 +1.0 1.7 hypothetical protein compare
BWI76_RS23355 +1.0 0.5 LacI family transcriptional regulator compare
BWI76_RS03910 +1.0 1.9 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS22035 +1.0 1.4 DeoR family transcriptional regulator compare
BWI76_RS16075 +1.0 1.2 oxidoreductase compare
BWI76_RS08730 +1.0 2.0 histidine utilization repressor compare
BWI76_RS11840 +1.0 2.2 tryptophan synthase subunit alpha compare
BWI76_RS07565 +1.0 2.0 LysE type translocator family protein compare
BWI76_RS01805 +1.0 1.3 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS27955 +1.0 1.5 sugar-phosphatase compare
BWI76_RS19160 +1.0 1.1 histidine kinase compare
BWI76_RS10585 +1.0 1.2 amino acid ABC transporter ATP-binding protein compare
BWI76_RS04975 +1.0 1.9 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS26405 +1.0 0.8 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS18525 +1.0 1.8 phospholipid:lipid A palmitoyltransferase compare
BWI76_RS18625 +1.0 2.2 CysB family transcriptional regulator compare
BWI76_RS09325 +1.0 2.1 putative bacteriophage tail completion protein compare
BWI76_RS15360 +1.0 1.7 hypothetical protein compare
BWI76_RS16285 +1.0 1.1 hypothetical protein compare
BWI76_RS10955 +1.0 1.2 hypothetical protein compare
BWI76_RS05445 +1.0 1.8 type 11 methyltransferase compare
BWI76_RS22125 +1.0 0.8 membrane protein compare
BWI76_RS12875 +1.0 2.1 bifunctional deaminase-reductase compare
BWI76_RS23200 +1.0 1.6 propionate kinase compare
BWI76_RS23945 +1.0 0.9 methylmalonyl-CoA decarboxylase compare
BWI76_RS15165 +1.0 1.6 MBL fold metallo-hydrolase compare
BWI76_RS18680 +0.9 2.2 EAL domain-containing protein compare
BWI76_RS25060 +0.9 1.6 lipoprotein NlpI compare
BWI76_RS16875 +0.9 2.2 putative type I cysteine dioxygenase compare
BWI76_RS12790 +0.9 1.0 lactate dehydrogenase compare
BWI76_RS26270 +0.9 2.1 N-acetyltransferase compare
BWI76_RS11790 +0.9 1.9 acyl-CoA thioesterase compare
BWI76_RS17360 +0.9 1.9 nitrate reductase compare
BWI76_RS12095 +0.9 1.3 hypothetical protein compare
BWI76_RS26150 +0.9 1.2 molecular chaperone Hsp33 compare
BWI76_RS22815 +0.9 3.0 hybrid sensor histidine kinase/response regulator compare
BWI76_RS14310 +0.9 1.9 hypothetical protein compare
BWI76_RS18345 +0.9 3.1 transcriptional regulator SdiA compare
BWI76_RS22235 +0.9 1.9 transcriptional regulator GutM compare
BWI76_RS09490 +0.9 1.8 DNA-binding response regulator compare
BWI76_RS05645 +0.9 1.1 fructuronate reductase compare
BWI76_RS13220 +0.9 1.4 N-acetyltransferase compare
BWI76_RS08975 +0.9 2.4 amino acid ABC transporter substrate-binding protein compare
BWI76_RS02740 +0.9 1.0 putative transcriptional regulator compare
BWI76_RS16535 +0.9 1.1 MATE family efflux transporter compare
BWI76_RS13310 +0.9 4.3 glucan biosynthesis protein D compare
BWI76_RS02525 +0.9 2.3 DNA mismatch repair protein MutL compare
BWI76_RS01565 +0.9 1.2 NADH pyrophosphatase compare
BWI76_RS24155 +0.9 1.2 A/G-specific adenine glycosylase compare
BWI76_RS20250 +0.9 1.2 hypothetical protein compare
BWI76_RS25705 +0.9 2.4 hypothetical protein compare
BWI76_RS08180 +0.9 2.1 asparagine synthase B compare
BWI76_RS24205 +0.9 1.5 cystathionine beta-synthase compare
BWI76_RS25545 +0.9 1.6 hypothetical protein compare
BWI76_RS14290 +0.9 1.3 AAA family ATPase compare
BWI76_RS23905 +0.9 1.1 Z-ring-associated protein compare
BWI76_RS09050 +0.9 1.5 MFS transporter compare
BWI76_RS11655 +0.9 1.1 TVP38/TMEM64 family protein compare
BWI76_RS00710 +0.9 1.0 6-N-hydroxylaminopurine resistance protein compare


Specific Phenotypes

For 3 genes in this experiment