Experiment set32IT036 for Klebsiella michiganensis M5al

Compare to:

Parafilmed volatile agar plate with no fungus

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -9.7 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -9.1 -11.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS02995 -7.3 -9.3 aspartate carbamoyltransferase compare
BWI76_RS10990 -7.0 -3.0 dihydroorotase compare
BWI76_RS19055 -6.9 -11.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS19050 -6.5 -10.9 NAD(P)-dependent oxidoreductase compare
BWI76_RS01210 -6.4 -3.1 tyrosine recombinase XerC compare
BWI76_RS00600 -6.2 -6.7 LacI family transcriptional regulator compare
BWI76_RS09645 -6.0 -1.7 thioredoxin-disulfide reductase compare
BWI76_RS19060 -5.7 -15.0 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS19040 -5.7 -3.9 hypothetical protein compare
BWI76_RS23265 -5.6 -3.6 hypothetical protein compare
BWI76_RS07725 -5.3 -1.5 iron-enterobactin transporter permease compare
BWI76_RS15110 -5.1 -7.8 putative excinuclease ABC subunit A compare
BWI76_RS26665 -4.8 -4.6 DNA-binding response regulator compare
BWI76_RS19045 -4.8 -5.7 capsular polysaccharide biosynthesis protein compare
BWI76_RS15975 -4.8 -1.3 hypothetical protein compare
BWI76_RS09910 -4.7 -14.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS19070 -4.3 -7.8 rhamnosyltransferase compare
BWI76_RS23330 -4.2 -4.4 transcriptional regulator GalR compare
BWI76_RS27385 -4.0 -4.9 orotate phosphoribosyltransferase compare
BWI76_RS26085 -4.0 -1.9 3-dehydroquinate synthase compare
BWI76_RS19035 -4.0 -2.7 dTDP-rhamnosyl transferase compare
BWI76_RS04510 -4.0 -1.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19010 -3.8 -2.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS12170 -3.6 -5.1 hypothetical protein compare
BWI76_RS13915 -3.6 -8.4 magnesium transport protein MgtC compare
BWI76_RS08720 -3.6 -2.0 imidazolonepropionase compare
BWI76_RS19065 -3.5 -14.6 dTDP-glucose 4,6-dehydratase compare
BWI76_RS08500 -3.4 -2.7 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS20150 -3.4 -2.3 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS08495 -3.4 -4.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS09640 -3.4 -2.3 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS09860 -3.3 -3.7 hypothetical protein compare
BWI76_RS14980 -3.3 -1.8 hypothetical protein compare
BWI76_RS05450 -3.3 -1.3 ribonuclease HI compare
BWI76_RS07465 -3.2 -1.2 TetR family transcriptional regulator compare
BWI76_RS08385 -3.2 -3.1 citrate (Si)-synthase compare
BWI76_RS23885 -3.2 -1.2 2-octaprenylphenol hydroxylase compare
BWI76_RS06465 -3.1 -1.8 IclR family transcriptional regulator compare
BWI76_RS26095 -3.1 -1.2 shikimate kinase compare
BWI76_RS16965 -3.1 -1.9 murein lipoprotein compare
BWI76_RS27390 -3.0 -3.4 ribonuclease PH compare
BWI76_RS04705 -2.9 -5.0 DNA-binding transcriptional regulator FruR compare
BWI76_RS13920 -2.9 -5.6 magnesium-translocating P-type ATPase compare
BWI76_RS15825 -2.9 -1.5 hypothetical protein compare
BWI76_RS06535 -2.9 -4.4 endopeptidase La compare
BWI76_RS19330 -2.9 -1.1 HAD family hydrolase compare
BWI76_RS26075 -2.8 -3.1 DNA adenine methylase compare
BWI76_RS15115 -2.8 -3.8 MFS transporter compare
BWI76_RS04100 -2.8 -3.4 peptide chain release factor 3 compare
BWI76_RS07740 -2.7 -1.5 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS08535 -2.7 -1.8 translocation protein TolB compare
BWI76_RS08405 -2.7 -2.5 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS15860 -2.6 -2.3 adenine-specific DNA methyltransferase compare
BWI76_RS06475 -2.6 -1.4 protoheme IX farnesyltransferase compare
BWI76_RS24900 -2.6 -1.9 DeoR family transcriptional regulator compare
BWI76_RS25960 -2.5 -3.1 NUDIX hydrolase compare
BWI76_RS17675 -2.5 -2.1 hypothetical protein compare
BWI76_RS09190 -2.5 -3.1 hypothetical protein compare
BWI76_RS19770 -2.5 -1.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS08205 -2.4 -3.4 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS11965 -2.4 -2.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09315 -2.4 -1.6 hypothetical protein compare
BWI76_RS20170 -2.4 -2.9 NADH-quinone oxidoreductase subunit F compare
BWI76_RS22420 -2.3 -1.8 LacI family transcriptional regulator compare
BWI76_RS15955 -2.3 -3.4 transcriptional regulator compare
BWI76_RS23240 -2.3 -1.6 exonuclease V subunit gamma compare
BWI76_RS15225 -2.3 -1.4 DeoR family transcriptional regulator compare
BWI76_RS01800 -2.2 -2.8 glucose-6-phosphate isomerase compare
BWI76_RS08430 -2.2 -3.2 succinate--CoA ligase subunit alpha compare
BWI76_RS19905 -2.2 -3.3 OmpK36 porin compare
BWI76_RS19845 -2.2 -6.7 phosphatase compare
BWI76_RS24850 -2.2 -4.2 DeoR family transcriptional regulator compare
BWI76_RS27430 -2.2 -0.9 (p)ppGpp synthetase compare
BWI76_RS01205 -2.2 -2.3 DUF484 family protein compare
BWI76_RS26190 -2.2 -3.6 glycerol-3-phosphate dehydrogenase compare
BWI76_RS22625 -2.2 -1.5 transcriptional regulator compare
BWI76_RS01220 -2.2 -4.2 DNA-dependent helicase II compare
BWI76_RS02725 -2.2 -1.0 HxlR family transcriptional regulator compare
BWI76_RS04645 -2.1 -3.8 3-dehydroquinase compare
BWI76_RS20140 -2.1 -2.7 NADH-quinone oxidoreductase subunit L compare
BWI76_RS09660 -2.1 -1.3 DNA translocase FtsK compare
BWI76_RS07070 -2.1 -3.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS12090 -2.1 -1.0 HNH endonuclease compare
BWI76_RS02530 -2.1 -1.4 tRNA dimethylallyltransferase compare
BWI76_RS15840 -2.1 -1.8 prophage protein compare
BWI76_RS08425 -2.0 -2.3 succinyl-CoA ligase subunit beta compare
BWI76_RS01185 -2.0 -1.4 adenylate cyclase compare
BWI76_RS00065 -2.0 -3.4 MurR/RpiR family transcriptional regulator compare
BWI76_RS20650 -2.0 -1.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS06630 -2.0 -3.4 hypothetical protein compare
BWI76_RS27165 -2.0 -2.6 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS04160 -2.0 -3.5 phosphoserine phosphatase compare
BWI76_RS08530 -2.0 -1.5 protein TolA compare
BWI76_RS23830 -1.9 -4.9 hypothetical protein compare
BWI76_RS02610 -1.9 -3.2 transcriptional regulator compare
BWI76_RS02815 -1.9 -1.4 fructose-bisphosphatase class I compare
BWI76_RS13250 -1.9 -1.1 cytochrome b561 compare
BWI76_RS22690 -1.9 -2.2 adenylyl-sulfate kinase compare
BWI76_RS05235 -1.9 -0.7 hypothetical protein compare
BWI76_RS16955 -1.9 -0.9 hypothetical protein compare
BWI76_RS12285 -1.9 -1.9 hypothetical protein compare
BWI76_RS21140 -1.9 -1.6 molecular chaperone HscA compare
BWI76_RS20435 -1.9 -1.0 chorismate synthase compare
BWI76_RS08395 -1.8 -1.4 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS14075 -1.8 -1.2 TetR family transcriptional regulator compare
BWI76_RS08525 -1.8 -2.2 colicin transporter compare
BWI76_RS27275 -1.8 -7.6 hypothetical protein compare
BWI76_RS05120 -1.8 -6.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS27280 -1.8 -5.9 polymerase compare
BWI76_RS09635 -1.8 -1.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS08210 -1.8 -1.2 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS12450 -1.8 -2.6 phage shock protein PspA compare
BWI76_RS21070 -1.8 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS00025 -1.8 -0.8 hypothetical protein compare
BWI76_RS13560 -1.7 -0.8 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS17110 -1.7 -1.3 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS17190 -1.7 -1.4 TonB system transport protein TonB compare
BWI76_RS27475 -1.7 -6.6 regulatory protein GntR family protein compare
BWI76_RS02690 -1.7 -1.6 hypothetical protein compare
BWI76_RS16950 -1.7 -2.0 TetR family transcriptional regulator compare
BWI76_RS17530 -1.7 -2.1 hypothetical protein compare
BWI76_RS20165 -1.7 -2.7 NADH-quinone oxidoreductase subunit G compare
BWI76_RS27170 -1.7 -4.8 MltR family transcriptional regulator compare
BWI76_RS12070 -1.7 -0.9 hypothetical protein compare
BWI76_RS19085 -1.7 -7.8 protein-tyrosine-phosphatase compare
BWI76_RS21310 -1.6 -0.9 DNA repair protein RecO compare
BWI76_RS01385 -1.6 -1.7 potassium transporter compare
BWI76_RS08370 -1.6 -2.4 membrane protein compare
BWI76_RS26175 -1.6 -3.4 DeoR/GlpR family transcriptional regulator compare
BWI76_RS06730 -1.6 -1.9 lac repressor compare
BWI76_RS20135 -1.6 -3.1 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20810 -1.6 -2.4 ethanolamine utilization cobalamin adenosyltransferase compare
BWI76_RS06495 -1.6 -4.7 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS24240 -1.6 -1.3 hypothetical protein compare
BWI76_RS13595 -1.6 -3.4 transcriptional regulator compare
BWI76_RS02865 -1.6 -2.9 hypothetical protein compare
BWI76_RS02545 -1.6 -4.0 protease modulator HflK compare
BWI76_RS16360 -1.5 -1.0 electron transport complex subunit RsxB compare
BWI76_RS20965 -1.5 -1.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26670 -1.5 -7.3 two-component sensor histidine kinase compare
BWI76_RS00755 -1.5 -2.3 ATP-dependent protease subunit HslV compare
BWI76_RS19325 -1.5 -1.3 mandelate racemase compare
BWI76_RS01325 -1.5 -1.5 twin-arginine translocase subunit TatB compare
BWI76_RS20360 -1.5 -0.7 cell division protein DedD compare
BWI76_RS23860 -1.5 -1.5 protein disulfide oxidoreductase compare
BWI76_RS03080 -1.5 -2.0 (Fe-S)-cluster assembly protein compare
BWI76_RS11235 -1.5 -0.8 hypothetical protein compare
BWI76_RS11690 -1.5 -5.0 succinylglutamate desuccinylase compare
BWI76_RS13180 -1.5 -1.8 multidrug transporter EmrA compare
BWI76_RS03235 -1.5 -10.1 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS20270 -1.5 -4.5 hypothetical protein compare
BWI76_RS06490 -1.5 -2.0 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS25300 -1.5 -2.0 hybrid sensor histidine kinase/response regulator compare
BWI76_RS27305 -1.5 -3.8 glycosyl transferase compare
BWI76_RS26620 -1.5 -0.7 Fe-S biogenesis protein NfuA compare
BWI76_RS25920 -1.5 -1.4 peptidylprolyl isomerase compare
BWI76_RS15850 -1.4 -0.6 DUF1317 domain-containing protein compare
BWI76_RS07185 -1.4 -1.1 hypothetical protein compare
BWI76_RS14650 -1.4 -2.0 helix-turn-helix transcriptional regulator compare
BWI76_RS02785 -1.4 -2.0 AIG2 family protein compare
BWI76_RS19535 -1.4 -2.0 putative integral membrane protein compare
BWI76_RS03835 -1.4 -2.2 4-hydroxyphenylacetate catabolism regulatory protein HpaA compare
BWI76_RS06485 -1.4 -1.6 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS07705 -1.4 -2.2 enterochelin esterase compare
BWI76_RS21370 -1.4 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS24280 -1.3 -2.6 biopolymer transporter ExbB compare
BWI76_RS15290 -1.3 -0.9 transcriptional regulator compare
BWI76_RS01350 -1.3 -0.6 NAD(P)H-flavin reductase compare
BWI76_RS08650 -1.3 -1.0 molybdate ABC transporter permease compare
BWI76_RS20160 -1.3 -1.6 NADH-quinone oxidoreductase subunit H compare
BWI76_RS27225 -1.3 -2.3 rhodanese-like domain-containing protein compare
BWI76_RS15060 -1.3 -2.4 MarR family transcriptional regulator compare
BWI76_RS03225 -1.3 -3.5 transcriptional regulator compare
BWI76_RS07510 -1.3 -1.3 hypothetical protein compare
BWI76_RS17525 -1.3 -1.2 XshC-Cox1-family protein compare
BWI76_RS23230 -1.3 -0.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS17720 -1.3 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS10875 -1.3 -2.2 quercetin 2,3-dioxygenase compare
BWI76_RS01080 -1.3 -4.9 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS08520 -1.3 -1.4 colicin transporter TolQ compare
BWI76_RS02940 -1.3 -3.7 RpiR family transcriptional regulator compare
BWI76_RS18165 -1.3 -0.8 NUDIX pyrophosphatase compare
BWI76_RS24275 -1.2 -1.9 biopolymer transport protein ExbD compare
BWI76_RS06395 -1.2 -1.7 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS20190 -1.2 -2.3 NADH-quinone oxidoreductase subunit A compare
BWI76_RS21940 -1.2 -2.3 SDR family oxidoreductase compare
BWI76_RS26150 -1.2 -1.5 molecular chaperone Hsp33 compare
BWI76_RS00240 -1.2 -1.2 FMN-binding protein MioC compare
BWI76_RS01095 -1.2 -1.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS07680 -1.2 -3.0 transketolase compare
BWI76_RS21460 -1.2 -0.8 translation inhibitor protein RaiA compare
BWI76_RS17775 -1.2 -1.4 hypothetical protein compare
BWI76_RS15810 -1.2 -2.9 hypothetical protein compare
BWI76_RS11900 -1.2 -0.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS23760 -1.2 -0.9 tRNA-Gly compare
BWI76_RS05680 -1.2 -2.6 LacI family transcriptional regulator compare
BWI76_RS07675 -1.2 -2.6 DeoR family transcriptional regulator compare
BWI76_RS16375 -1.2 -1.1 electron transport complex subunit G compare


Specific Phenotypes

For 5 genes in this experiment