Experiment set32IT033 for Klebsiella michiganensis M5al
Parafilmed volatile agar plate with no fungus
Group: agar plate interaction controlMedia: LB
Culturing: Koxy_ML2a, agar plate, Aerobic, at 30 (C), (Solid)
By: Cat_Manuel on 2/1/22
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 1 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Formate dehydrogenase | 1 |
| Formate hydrogenase | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| formate oxidation to CO2 | 1 | 1 | 1 |
| nitrate reduction III (dissimilatory) | 2 | 2 | 1 |
| formate to dimethyl sulfoxide electron transfer | 2 | 2 | 1 |
| formate to trimethylamine N-oxide electron transfer | 2 | 1 | 1 |
| formate to nitrite electron transfer | 3 | 1 | 1 |
| oxalate degradation VI | 4 | 1 | 1 |
| oxalate degradation III | 5 | 1 | 1 |
| superpathway of C1 compounds oxidation to CO2 | 12 | 4 | 1 |
| purine nucleobases degradation I (anaerobic) | 15 | 6 | 1 |
| purine nucleobases degradation II (anaerobic) | 24 | 17 | 1 |