Experiment set32IT031 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

200 most important genes:

  gene name fitness t score description  
BWI76_RS09645 -6.9 -2.4 thioredoxin-disulfide reductase compare
BWI76_RS04465 -6.8 -9.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS27305 -6.7 -9.2 glycosyl transferase compare
BWI76_RS23265 -6.1 -5.2 hypothetical protein compare
BWI76_RS04470 -5.9 -13.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS01210 -5.8 -3.7 tyrosine recombinase XerC compare
BWI76_RS27290 -5.7 -8.0 hypothetical protein compare
BWI76_RS02995 -5.6 -14.8 aspartate carbamoyltransferase compare
BWI76_RS02530 -5.5 -3.8 tRNA dimethylallyltransferase compare
BWI76_RS04510 -5.4 -3.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS19010 -5.2 -3.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS19040 -5.2 -8.6 hypothetical protein compare
BWI76_RS15825 -5.1 -6.3 hypothetical protein compare
BWI76_RS10990 -4.1 -5.0 dihydroorotase compare
BWI76_RS26665 -4.1 -5.2 DNA-binding response regulator compare
BWI76_RS23480 -4.0 -12.6 EAL domain-containing protein compare
BWI76_RS15115 -4.0 -5.5 MFS transporter compare
BWI76_RS19035 -3.8 -9.4 dTDP-rhamnosyl transferase compare
BWI76_RS09970 -3.8 -1.6 porin OmpA compare
BWI76_RS06525 -3.8 -5.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS01330 -3.6 -5.2 twin-arginine translocase subunit TatC compare
BWI76_RS09660 -3.6 -2.4 DNA translocase FtsK compare
BWI76_RS05120 -3.4 -13.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS13915 -3.4 -7.6 magnesium transport protein MgtC compare
BWI76_RS06765 -3.3 -3.1 transcriptional regulator compare
BWI76_RS00600 -3.2 -11.5 LacI family transcriptional regulator compare
BWI76_RS15225 -3.1 -2.1 DeoR family transcriptional regulator compare
BWI76_RS06530 -3.1 -7.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS08120 -3.1 -4.6 cobalt transporter compare
BWI76_RS23240 -3.1 -3.6 exonuclease V subunit gamma compare
BWI76_RS26390 -3.0 -7.1 cell division protein FtsX compare
BWI76_RS15110 -3.0 -12.3 putative excinuclease ABC subunit A compare
BWI76_RS05835 -3.0 -3.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS16965 -2.9 -2.7 murein lipoprotein compare
BWI76_RS15840 -2.8 -2.9 prophage protein compare
BWI76_RS19845 -2.8 -9.3 phosphatase compare
BWI76_RS19050 -2.7 -9.9 NAD(P)-dependent oxidoreductase compare
BWI76_RS11155 -2.7 -4.6 penicillin-binding protein activator LpoB compare
BWI76_RS05200 -2.7 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS26455 -2.7 -3.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09910 -2.7 -17.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS26395 -2.6 -4.8 cell division protein FtsE compare
BWI76_RS19060 -2.6 -17.0 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS15850 -2.6 -0.9 DUF1317 domain-containing protein compare
BWI76_RS26670 -2.6 -9.1 two-component sensor histidine kinase compare
BWI76_RS19055 -2.6 -9.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS26460 -2.5 -6.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS01325 -2.4 -1.9 twin-arginine translocase subunit TatB compare
BWI76_RS26570 -2.4 -3.6 anion permease compare
BWI76_RS09190 -2.3 -4.0 hypothetical protein compare
BWI76_RS23230 -2.3 -4.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS06770 -2.2 -8.2 Hha toxicity attenuator compare
BWI76_RS00875 -2.2 -7.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS13920 -2.2 -4.9 magnesium-translocating P-type ATPase compare
BWI76_RS27385 -2.2 -8.7 orotate phosphoribosyltransferase compare
BWI76_RS01200 -2.2 -2.4 diaminopimelate epimerase compare
BWI76_RS12170 -2.2 -3.6 hypothetical protein compare
BWI76_RS00345 -2.1 -4.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS26200 -2.1 -7.5 starch synthase compare
BWI76_RS09640 -2.1 -2.0 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS27235 -2.0 -8.3 murein hydrolase activator EnvC compare
BWI76_RS12090 -2.0 -1.7 HNH endonuclease compare
BWI76_RS02410 -1.9 -1.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS19840 -1.9 -1.8 hypothetical protein compare
BWI76_RS19045 -1.9 -8.6 capsular polysaccharide biosynthesis protein compare
BWI76_RS24025 -1.8 -6.1 agmatinase compare
BWI76_RS26775 -1.8 -3.0 endo-1,4-D-glucanase compare
BWI76_RS08525 -1.8 -3.4 colicin transporter compare
BWI76_RS24080 -1.8 -2.4 DUF179 domain-containing protein compare
BWI76_RS01205 -1.7 -3.7 DUF484 family protein compare
BWI76_RS19070 -1.7 -10.4 rhamnosyltransferase compare
BWI76_RS23485 -1.7 -5.6 hypothetical protein compare
BWI76_RS25600 -1.6 -1.1 tRNA-Thr compare
BWI76_RS17720 -1.6 -1.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS20650 -1.6 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS26075 -1.6 -4.2 DNA adenine methylase compare
BWI76_RS25300 -1.6 -2.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS26425 -1.5 -7.3 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS25060 -1.5 -3.1 lipoprotein NlpI compare
BWI76_RS21540 -1.5 -4.9 membrane protein compare
BWI76_RS15830 -1.5 -1.9 hypothetical protein compare
BWI76_RS18710 -1.4 -8.4 GGDEF-domain containing protein compare
BWI76_RS00760 -1.4 -3.4 cell division protein FtsN compare
BWI76_RS16260 -1.4 -2.2 two-component sensor histidine kinase compare
BWI76_RS11965 -1.4 -2.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS12285 -1.4 -3.1 hypothetical protein compare
BWI76_RS20380 -1.4 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS24400 -1.4 -4.5 outer membrane channel protein TolC compare
BWI76_RS01220 -1.4 -5.2 DNA-dependent helicase II compare
BWI76_RS21310 -1.3 -1.4 DNA repair protein RecO compare
BWI76_RS25065 -1.3 -2.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS20150 -1.3 -1.6 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS15060 -1.3 -2.6 MarR family transcriptional regulator compare
BWI76_RS15835 -1.3 -1.0 hypothetical protein compare
BWI76_RS19905 -1.3 -3.6 OmpK36 porin compare
BWI76_RS18715 -1.3 -4.6 hypothetical protein compare
BWI76_RS12235 -1.3 -2.2 hypothetical protein compare
BWI76_RS22755 -1.2 -4.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS25870 -1.2 -1.5 elongation factor Tu compare
BWI76_RS21535 -1.2 -4.1 inner membrane protein YpjD compare
BWI76_RS08535 -1.2 -2.0 translocation protein TolB compare
BWI76_RS26440 -1.2 -1.4 hypothetical protein compare
BWI76_RS18200 -1.2 -3.3 copper homeostasis protein CutC compare
BWI76_RS00965 -1.2 -1.2 acetolactate synthase 2 small subunit compare
BWI76_RS12265 -1.2 -5.6 hypothetical protein compare
BWI76_RS12255 -1.2 -7.3 hypothetical protein compare
BWI76_RS12275 -1.2 -6.7 hypothetical protein compare
BWI76_RS15860 -1.2 -1.7 adenine-specific DNA methyltransferase compare
BWI76_RS25505 -1.2 -5.6 RNase E specificity factor CsrD compare
BWI76_RS19330 -1.1 -1.2 HAD family hydrolase compare
BWI76_RS00010 -1.1 -4.5 DNA replication and repair protein RecF compare
BWI76_RS21000 -1.1 -4.4 exopolyphosphatase compare
BWI76_RS19325 -1.1 -1.8 mandelate racemase compare
BWI76_RS13595 -1.1 -4.1 transcriptional regulator compare
BWI76_RS08615 -1.1 -2.4 galactokinase compare
BWI76_RS20170 -1.1 -2.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS00720 -1.1 -1.9 DNA-binding response regulator compare
BWI76_RS23475 -1.1 -5.4 helix-turn-helix transcriptional regulator compare
BWI76_RS14170 -1.1 -3.0 hypothetical protein compare
BWI76_RS17975 -1.1 -2.3 tail-specific protease compare
BWI76_RS15975 -1.1 -1.1 hypothetical protein compare
BWI76_RS19920 -1.1 -5.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS19910 -1.1 -6.3 phosphotransferase RcsD compare
BWI76_RS24280 -1.0 -4.2 biopolymer transporter ExbB compare
BWI76_RS01350 -1.0 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS12590 -1.0 -3.9 helix-turn-helix-type transcriptional regulator compare
BWI76_RS00265 -1.0 -6.1 potassium transporter Kup compare
BWI76_RS08530 -1.0 -2.0 protein TolA compare
BWI76_RS12270 -1.0 -2.9 hypothetical protein compare
BWI76_RS05235 -1.0 -0.8 hypothetical protein compare
BWI76_RS24075 -1.0 -2.8 glutathione synthase compare
BWI76_RS20785 -1.0 -1.2 ethanolamine utilization protein EutJ compare
BWI76_RS25700 -1.0 -3.6 heavy metal-responsive transcriptional regulator compare
BWI76_RS20135 -1.0 -2.6 NADH-quinone oxidoreductase subunit M compare
BWI76_RS27165 -1.0 -2.3 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS08495 -1.0 -2.7 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS05840 -1.0 -3.8 glutamate 5-kinase compare
BWI76_RS22765 -1.0 -4.6 sulfite reductase subunit alpha compare
BWI76_RS08605 -1.0 -1.5 phosphoglyceromutase compare
BWI76_RS18770 -1.0 -0.9 DNA gyrase inhibitor compare
BWI76_RS05140 -1.0 -3.5 Fe3+-hydroxamate ABC transporter permease FhuB compare
BWI76_RS09960 -0.9 -2.1 Lon protease compare
BWI76_RS18870 -0.9 -1.2 protein NifZ compare
BWI76_RS15350 -0.9 -1.1 hypothetical protein compare
BWI76_RS01565 -0.9 -1.4 NADH pyrophosphatase compare
BWI76_RS12240 -0.9 -4.8 terminase small subunit compare
BWI76_RS12245 -0.9 -5.8 hypothetical protein compare
BWI76_RS00715 -0.9 -2.2 two-component sensor histidine kinase compare
BWI76_RS12290 -0.9 -3.6 hypothetical protein compare
BWI76_RS04270 -0.9 -2.4 transaldolase compare
BWI76_RS00180 -0.9 -0.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS23860 -0.9 -1.9 protein disulfide oxidoreductase compare
BWI76_RS20165 -0.9 -2.2 NADH-quinone oxidoreductase subunit G compare
BWI76_RS21075 -0.9 -0.9 membrane protein compare
BWI76_RS08620 -0.9 -3.0 galactose-1-phosphate uridylyltransferase compare
BWI76_RS21370 -0.9 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS17780 -0.9 -2.3 septum formation inhibitor compare
BWI76_RS21070 -0.9 -1.0 outer membrane protein assembly factor BamB compare
BWI76_RS12350 -0.8 -5.5 kinase compare
BWI76_RS16035 -0.8 -1.2 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS12410 -0.8 -4.5 hypothetical protein compare
BWI76_RS11135 -0.8 -3.4 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS01800 -0.8 -2.5 glucose-6-phosphate isomerase compare
BWI76_RS22760 -0.8 -3.3 sulfite reductase subunit beta compare
BWI76_RS05135 -0.8 -2.6 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS06685 -0.8 -6.4 cyclic diguanylate phosphodiesterase (EAL) domain-containing protein compare
BWI76_RS05355 -0.8 -2.2 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS08350 -0.8 -1.1 carboxylase compare
BWI76_RS15680 -0.8 -1.6 hypothetical protein compare
BWI76_RS06490 -0.8 -2.0 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS00755 -0.8 -2.0 ATP-dependent protease subunit HslV compare
BWI76_RS12250 -0.8 -4.9 terminase compare
BWI76_RS27390 -0.8 -2.1 ribonuclease PH compare
BWI76_RS22650 -0.8 -3.2 lipoprotein NlpD compare
BWI76_RS08500 -0.8 -1.0 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS24115 -0.8 -2.4 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
BWI76_RS14520 -0.8 -3.9 hypothetical protein compare
BWI76_RS09635 -0.8 -1.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS20190 -0.8 -3.0 NADH-quinone oxidoreductase subunit A compare
BWI76_RS05350 -0.8 -4.2 Rcs stress response system protein RcsF compare
BWI76_RS12190 -0.8 -2.8 glycoside hydrolase family protein compare
BWI76_RS26475 -0.7 -4.3 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
BWI76_RS17980 -0.7 -2.3 RNA chaperone ProQ compare
BWI76_RS10950 -0.7 -2.1 MFS transporter compare
BWI76_RS22210 -0.7 -2.9 murein transglycosylase B compare
BWI76_RS19615 -0.7 -1.3 vancomycin high temperature exclusion protein compare
BWI76_RS12260 -0.7 -3.2 hypothetical protein compare
BWI76_RS12395 -0.7 -4.5 zinc-binding alcohol dehydrogenase compare
BWI76_RS11110 -0.7 -2.0 cell division protein YceG compare
BWI76_RS02575 -0.7 -3.3 exoribonuclease R compare
BWI76_RS12215 -0.7 -3.8 HNH endonuclease compare
BWI76_RS06190 -0.7 -1.0 hypothetical protein compare
BWI76_RS23820 -0.7 -1.9 flavodoxin FldB compare
BWI76_RS11260 -0.7 -1.5 hypothetical protein compare
BWI76_RS19495 -0.7 -0.8 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS27310 -0.7 -3.6 glycosyltransferase compare
BWI76_RS08310 -0.7 -0.8 potassium-transporting ATPase subunit C compare
BWI76_RS12115 -0.7 -2.4 hypothetical protein compare
BWI76_RS12375 -0.7 -1.8 DNA-invertase hin compare
BWI76_RS19535 -0.7 -1.8 putative integral membrane protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered across organisms